Gambusia affinis (western mosquitofish): 122819907
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Entry
122819907 CDS
T07758
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04217
Necroptosis
gaf04622
RIG-I-like receptor signaling pathway
gaf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122819907 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122819907 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
122819907 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122819907 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122819907 (si:cabz01101003.1)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122819907 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C67
122819907 (si:cabz01101003.1)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122819907 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
122819907
NCBI-ProteinID:
XP_043952890
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All DBs
Position
LG18:complement(7401326..7413196)
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AA seq
956 aa
AA seq
DB search
MSGAPEQNRKRRSFKLFLIATDLQVQDDLEGPILLSRGFICQEQDQGRIRKDALWVKVLD
NGVMVKIEKKYLLEISADLVGLVEPVSDLEVRLNLLNNPDNLRQLASLPSNAPLWVLLGA
QDELAEAELRYIGPLSGGSSALYFGVELKGSAVGRGTCNGSNKGIRYFSCPDACGLFVPV
SHIRLRHWSSRNNIRAPEKTRDRSRRSNHGINGNNDRSNQPHLRGISFHHNRPKVPLQTQ
DVLSRTAESTPIAVHNNPRGSSSPPPFHVGQRVCVNLNGIVHGGEVRFCGALPGRSSSST
YVGVLLDAPVGNWDGLYKEHRLCHIPCHLYGLLLPVSSVFAEQTSPKPILKPALSPNTKQ
SPMSPAPAPRLPLVLPAKQALKPPLPPPKPTNKSLLMRPMPPPKPQNLTPVSALEHTNGS
HSPFSPLRPVDNEEENEEEVEEEEGADDYGGTRLETELEVGSMVEVNDPPLFGVIRWIGH
LGALKELVAGIELEQELSVGTDGSYLGERHFRCPANKGLFVKLRNCRRDSRFPVPEKPVN
QVERCNSIAFADWGSERVDEHTPPVDGDEARQMYEGSKRGIQGHLNSCYLDATLFSLFSC
CSSADWVLFWPSDAETNQSSRLAQDLLRCEIVNPLRRNGYVCASKTMALRRLLEAANSNA
GFTNQEKDPEEFLNKLFQLLRVEPLLKIRSVTQQAQKCHLYQLFPPTLPPSPVSPVDSPI
PMSSPASMRVASVQSLLESSFLHGGLKFAEAPSCLLLLMPRFGKDFKMFDAILPSLSLDI
TDLLDDTLRQCSICQAVAEWECVQCYEDLDITPGHLKQYCQTCNTQVHSHRNRASHNPVK
IAVPQGPWSGPLHHTRQRMSLFAVTCIETSHYVSFVKHGPQASDWLFFDSMADREGGENG
FNIPQVRGCPEVGRYLGLSEEELSRVDASSLRESARRLLCDSYMCLYHSPELSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagctcctgagcagaacaggaagcgtcgttccttcaagctgttcctgatcgcg
accgaccttcaggtccaggatgatctggagggtcccattctgctgagcaggggcttcatc
tgccaagagcaggaccagggcaggatccgaaaggacgccctctgggttaaggtgctggac
aatggagtcatggtgaaaatagaaaagaaatacttgctggaaatctcagctgacctcgtt
ggactggtggagcctgtgtccgacctggaagttcgactaaacctactaaacaatcccgac
aacctgcgacagctggcttctctcccctctaacgctccgctgtgggtcctgctcggcgct
caggatgagctggccgaggcagaactcaggtacatcggaccgctcagcggagggagcagc
gctttgtattttggagtggagctaaagggttcagcagtgggtagaggaacctgcaatggt
tccaacaagggcatccgctacttctcctgtcccgacgcctgcggcctcttcgtccccgtg
agccacatccgcctccgccactggtccagcaggaacaacatccgcgctccggagaaaacc
agggaccgttcccgccgctccaaccacggcatcaacggcaacaacgatcgctccaaccag
ccccacctgcgtggcataagcttccatcacaatcgccccaaggtcccgctgcagacgcag
gacgtgctctcgcggacggccgagtcgacacccatcgccgttcacaacaatccacgcggc
tcgtcgtcaccgccaccgttccacgtcggccagagagtgtgcgtcaacctgaatggcatt
gtccacggcggggaggtgcggttctgtggcgcattgcctggccgatcctcgtcttcgacg
tacgtcggagtccttctggatgctcctgttggtaactgggatggactttacaaggaacac
aggctctgccacattccctgtcatctctatggactgctgcttcccgtcagcagcgttttt
gcagaacaaacatctcctaagcccatcttgaagccagcgttgtcccctaataccaaacaa
tcaccgatgtcaccagctcctgctcccaggttgcccctggttctgcctgctaaacaagcg
ctgaagcctcctcttcctcctccaaagcctacaaacaaatctttactcatgcgcccaatg
ccgcctccaaaacctcaaaacctaacaccggtgtccgccttggagcacaccaacggttcc
cacagccctttctcgcctttaagacccgtagacaatgaagaggagaatgaggaggaggtg
gaggaagaggagggtgcagatgattacggaggaacgagactggagacagagctggaggtc
gggtcgatggttgaggtgaacgacccgccactcttcggggttatccgatggattggtcac
ttaggggccctcaaggagctggtggcgggaattgagctggagcaggagctgtctgttgga
acagacggcagttacctcggcgaacgccacttccgttgccccgccaacaaggggctgttc
gtcaagctccgcaactgcagacgggactccaggttccccgtccccgagaagcccgtcaac
caagtggagcgttgcaactcaatagcatttgcagattgggggagcgagcgggtggacgaa
cacactcctccggtggacggggacgaggccaggcagatgtacgaaggctcaaagagaggc
atccagggtcacctcaactcctgctacctggacgccacgctgttcagtttgttctcctgc
tgcagctcggcagactgggtgttattttggccatctgacgccgaaacgaaccaaagctcc
agactggctcaggacctgcttcgctgtgagatagtcaacccactgagaaggaatggctat
gtgtgtgccagtaagaccatggctctgaggcgcctgctggaagctgccaacagcaatgca
gggttcaccaaccaggaaaaagatcccgaagagttcctgaacaagcttttccagctgctg
cgagtcgagccactcctcaagatcagatcagtgactcagcaggctcagaagtgccatctc
taccaactctttccaccaacactccccccgtcgcccgtgtcccccgtcgactcgcccatc
cccatgtcctcgcccgcgtccatgagggtcgccagcgttcagtccttgctggagtcctcc
ttcctgcacggcggcctcaagtttgccgaggctccctcctgtctacttctgctaatgccc
cggtttgggaaggacttcaaaatgtttgacgccatcttgcccagcctcagtctggatatc
acagatttgctggacgacactctcaggcagtgcagtatctgccaggctgtagccgagtgg
gagtgtgtgcagtgctacgaagacttggacatcactcccggacatcttaagcaatactgc
cagacgtgcaacacgcaggttcacagtcacaggaaccgcgcgtcgcacaacccggtcaag
atcgccgttcctcaggggccgtggtcgggccctctgcatcacacccgccagcggatgtct
ctcttcgcggtgacgtgcatcgaaaccagccactacgtcagcttcgtcaagcacggaccc
caggcctccgactggttgttcttcgacagcatggcggaccgagaaggcggcgagaacggc
ttcaacatcccccaggtgagggggtgtcccgaggtgggccgctacctgggcctgtcggag
gaggagctgagcagggtggacgcctcgtctttgagggagtcggcccggaggctgctctgc
gactcctacatgtgcctgtaccacagcccagagctcagcctctacaagtga
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