Gambusia affinis (western mosquitofish): 122820050 Help Entry 122820050         CDS       T07758                                  Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gaf00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     122820050  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:gaf04990]     122820050 Domain-containing proteins not elsewhere classified [BR:gaf04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    122820050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin Motif Other DBs NCBI-GeneID:  122820050 NCBI-ProteinID:  XP_043953149 LinkDB All DBs Position LG18:complement(15591615..15613844) Genome browser AA seq 1572 aa AA seqDB search MGTGDYICVTLRGGAPWGFSLRQGEGDIYRPLLASQVEDGSRAYLAGVQEDDEVVSINGE PCADLTLLQALALIETSTSTLQLLLKRCNFLPSEDRVSEGMSLGEKVSSEENLKSTTLHI ISPKSEIPMEVYISDPQGEVLHRELHSDTEALSRGNLSDDLGGHELVFKHNKEVRRCCSP GEFVELQVSLSDQTLAYGGCASLGSARGIEGDFSAIEPIHTTSSHHVQCSVREPLGQHGV VVRASTVEGTLQPPDASGTGRSTLSVGGPMITENIGSQSEEEEGGGPSQPVSTSFTVSFE IPSDEATLAEEQEDSESEGDQEKPNKHRAKHARLRRNESLSEKQVKEAKSKCKRIALLLS AAPSNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDKPDFSDEEDDVNWDDKQEIPAGEFSF ETAIDCESNRPFFLNAPGSKGVLTFKLGKSLVEINTNLNNQTEMECLPETKGKGAAMFAQ RRQRMDEITAEHEELRRQGLPVEAVQELEKKVTEQSYIQSATEGHGYLDVNMHQQNQQQY QQYQEQQYYEQQQNYQQQQQYQQYQQQQYEQQQYKQQQLYQQQQQYHQEHQQMHQYSTNI NGTIQHQTNEIQSSYNNRTAKPFTTENVVATPYSHGASGTNQDSVGQGEQIASRDERIST PAIRTGLLSDSRRKNTGKPMFTFKEAPKVSPNPALLNLLNRSDKKGFESGPEEDYLSLGA EACNFLQSQRLKPKIPPPVAPKPLINPNSPPWSAQIEAANQDMPQCAENSLSTPAAPPTT ETAPAQELEPTPAPAPEPSTLPTPEETTANPTPAEQHSWTLPEPESEQQPAQVTSQETHG QVISAQHCESSQMATWGSVQVQAHQQLAACSWQSAQVQPQNPPPSQSPPQPPWVTRQSTQ NQTQIQLSSNTWTPQGQPSWTPHEEQAQPQTNAQPSWAQPQEQLQSHPQVQPSWTLMKEK QLLQQTQASWSQTQEPVQTQPQNRWMQPPHTNSQQELPWVQQPQQKPQVQPPWVQQVQPE IQPQHPWVQPEAQPQPSWGQQQHHQVLPQAWANAQVPGQPQPPWVSTPPQPQPPANPWAQ SQTQAQTQPPWMNAAQIQPQAQAQVNLNPWAPVPAHTPSQTSWAPQPPEHGGEQPINSWA QDQSQAQHQPPWTQSVPSPPTPQSNWQQSLSNTSQQPQLNTWPSAQAQPPTPVNDWRPQL QQSSLNVPLSTVNSQPSPKPWHPPQNQTPPPPPRRMFSYTVGQKTASPVNPMATVLNPKL SQGPAFEMPVVKGKGADMFAKRQSRMEKFVVDSETVEANKASRSTSPSVSLPNEWKYTPN VRAPPPRAYNPIQSPFYPPAATKQPPASGPSIKAKKKDQEKPIPAPKPLNVIDVMKHQPY KLDSSLFIFGTGAEAAKPPVPKPSSPPHSLLESQTIRYDQMAPVQHAGPFTPPYPQQGYG IPMQPVMHDPHYQQAQGNVYPYQPSPGSPYQQEYNQQYLQAVPPTYHPQAPQPLNHPYQQ AAYQPASSPPYLATPSVPYKALPTNNYVAPSIPLAARPDSVTGGGTGAAPKPKFTANKSS AQVWKPTLVEKD NT seq 4719 nt NT seq  +upstreamnt  +downstreamnt atgggcaccggggactacatctgcgtgaccctgcgtggtggcgcaccgtgggggttcagc ctaagacagggagagggggatatttacagacctttactcgcttcccaggtggaagatggc agtcgcgcctatctggctggagtccaggaggacgatgaggtggtgtcgatcaacggcgaa ccctgcgccgatctgacgcttttacaagctctagcactcatcgaaacgtctacaagcacc ctgcagttacttctgaaaagatgcaatttcctcccctctgaagacagggtctcagaaggg atgtcccttggtgaaaaggtctcttcagaggagaatttaaaaagcaccaccctccacatc atttccccaaagtctgaaatcccaatggaggtctacatatctgatccccaaggtgaggtg ctccatcgggagttgcacagcgacacagaagctctctcaagaggtaacttgtcagatgac ttgggaggccatgagctggtttttaagcacaacaaggaagtgcgacgatgctgttcccca ggagagtttgtggagcttcaggtgtccctgtctgaccaaaccttggcgtatgggggctgc gcctctcttgggagtgctcgagggattgagggggacttctcagcaattgaacccattcac accacctcatcccaccatgtgcaatgctccgttagagagccgctcgggcagcatggcgtg gtggtccgcgcttccactgtggagggcactttgcagcctccagatgcatcaggaacgggg aggagcactcttagcgtgggtggccccatgatcaccgaaaacattgggtcgcaaagtgaa gaggaggaaggagggggacccagtcagcctgtttctacgtctttcactgtctcattcgaa attccatcggacgaggcaactctagcagaagaacaagaagactccgaatcagaaggggat caagaaaaacccaacaagcatcgggcaaaacacgcaaggctcagacgtaacgagagtctg tcagagaaacaggtgaaggaggccaaatccaaatgtaaacgtatagctctccttctgtcg gctgctccttcaaaccccaataataagggggtgttgatgttcaagaaacatcgtcagagg gccaagaaatacacgctagtaagctacggcacaggagaggacaaaccagatttcagtgac gaagaagacgacgtgaactgggacgataagcaagaaatccccgctggtgaatttagcttt gaaactgctatcgattgtgaatcaaacaggcctttttttttgaatgctccaggtagtaaa ggtgtgctaacttttaagttagggaagagtcttgttgaaattaacaccaacttgaacaac caaactgagatggaatgtttgcctgaaaccaaaggcaagggtgcagcgatgtttgctcaa aggcgtcagaggatggatgagatcaccgctgaacacgaggagctccggcgtcaaggacta cctgtggaagcagtgcaagagttggagaagaaagtaacggagcaatcctatatccagtct gcaacagagggtcatggttatttggatgtgaatatgcaccaacaaaaccagcagcagtac cagcaatatcaggagcaacagtattatgagcaacaacaaaactaccaacagcagcaacag tatcaacaatatcagcagcagcagtacgagcaacaacaatacaagcaacagcaactgtat cagcaacagcaacaatatcatcaagagcaccagcaaatgcaccagtattctacaaatatc aatggtacaatccagcatcaaactaatgaaattcagagttcatacaacaatcgtactgca aaacctttcacaacagaaaacgtggtggcaacaccttattctcatggagcaagtgggacc aatcaagattctgttggccaaggagagcagatagcttcccgtgatgagcgcatttctact cctgcaattaggacaggcctgctgtcggactctaggagaaagaataccggcaagcctatg tttacttttaaagaggccccaaaagtatcacccaaccctgcattgctgaaccttctcaat agaagtgacaaaaaaggttttgagtctgggcctgaagaagactatcttagccttggagcg gaagcttgcaatttcctccagtcccaaagacttaaacctaagattcctccaccagttgcg ccaaagcctttgatcaaccccaactctcctccttggtctgctcagatagaagcagccaac caggacatgcctcagtgtgctgaaaatagtctgtccacacctgctgcaccccccaccaca gaaactgcccctgctcaagaactagagccaactcctgcacctgcccctgagccttctacc cttcctacccctgaggaaaccactgccaatcccactccagccgagcagcattcatggact ctccctgaaccagagtctgaacagcagcctgcgcaagtgacatctcaagagacacatggc caggtgatttctgctcagcattgtgagtcctctcaaatggccacctggggttcagtacag gtacaagcacatcaacagttagctgcttgttcatggcaatcagcccaagtgcaacctcag aacccacctccaagtcagtccccaccacagccaccatgggtaacacgtcaatctactcaa aaccaaacgcagattcagctaagctcaaatacttggacccctcaggggcaaccatcctgg actccgcatgaagagcaagcacaacctcagacaaatgctcaaccatcctgggcccagcct caagagcagcttcagtcccatccacaagttcagccatcatggactctcatgaaggagaag caactcttgcagcaaacacaggcctcctggagtcaaacccaagaaccagtacagacacaa ccccagaatcgatggatgcagcctccccatacaaactctcaacaggagctgccatgggtt caacaacctcagcaaaaacctcaagtacagccaccatgggttcaacaagttcagccagaa atacaaccacaacacccttgggttcaaccagaagcacagccacaaccatcttggggacaa cagcaacatcatcaggtactcccacaagcatgggcaaatgcccaagttccaggtcagcct caaccaccctgggtctcaactccacctcaaccgcaacctcctgccaatccatgggcacaa tcacaaacacaagcccaaactcagccaccgtggatgaatgcagctcagatacaacctcaa gcacaggctcaagttaatctgaatccatgggcaccagttcctgcacatactccatctcag acatcatgggctccacaacctccagaacatggtggtgagcaacctataaattcatgggct caggaccaaagtcaggcccaacatcaaccaccctggacacaatcagttccttcaccgccc acaccccagtccaactggcaacagtccctttcaaatacatctcaacaaccacaactcaat acatggccatcagctcaagcccagcctccaacaccagttaatgactggcgaccacagcta cagcaatcatctttgaatgttccattgtctacagtaaacagccaaccttctcctaaacca tggcacccaccacaaaaccagactcctccccctccaccacggcgaatgttctcttatact gttggtcaaaaaactgcatcgcctgtcaacccaatggccactgtcttaaatcctaaattg tcccagggtccagcttttgagatgccagtggtcaaaggaaaaggagctgacatgtttgct aagaggcaatctcgcatggagaagtttgttgtggactctgagactgtggaagccaacaaa gcaagtcgttcaacatcgccatctgtgtccttaccaaatgaatggaagtatacacccaat gtacgtgctccgcctcccagggcctacaatcctattcaatctcctttttatcccccagca gcaaccaaacagccccctgcaagtggtccttcaatcaaagcaaagaaaaaagaccaggag aaaccaatacctgcccctaaaccactgaatgttattgatgtcatgaagcatcaaccatat aaactagattcttcactctttatctttggtacaggagcagaggctgctaagccccctgta ccaaagcccagctcacctcctcactcgcttcttgaaagccaaacaattagatatgatcaa atggctccagtgcaacacgctggaccatttactcctccatatccccagcaaggctatggg atacccatgcagcctgtaatgcatgatccccactaccagcaagcccaaggaaatgtttat ccttatcagccatctccaggtagtccataccaacaagaatataaccagcagtatctgcag gctgttccaccaacttatcatccccaagcccctcagcctttaaaccatccctaccaacag gctgcttaccagccagccagcagccctccctatctggcaactccctcagtaccatacaaa gcactgcctactaataactacgtagccccaagtattcctctggctgctaggcctgattct gtaactggtggtggtactggagctgcacccaagcctaaatttactgctaacaagagctca gctcaggtgtggaagccaacattggttgaaaaagattga

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