Gambusia affinis (western mosquitofish): 122820057
Help
Entry
122820057 CDS
T07758
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
gaf03015
mRNA surveillance pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122820057 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
122820057 (acin1b)
03015 mRNA surveillance pathway
122820057 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122820057 (acin1b)
03041 Spliceosome [BR:
gaf03041
]
122820057 (acin1b)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122820057 (acin1b)
Spliceosome [BR:
gaf03041
]
Complex C
Other components
EJC/TREX
122820057 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
122820057
NCBI-ProteinID:
XP_043953159
LinkDB
All DBs
Position
LG18:10577535..10600624
Genome browser
AA seq
1193 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQRSSSSHS
GLQPNSQIGEEMCQNSFIKQYLAQQQELLRQRLAREAKKEEEADESATGPEEDEDHSEDN
DSPSFVSKHPGTLDQPPAPEAGGENLVIGHRPAAASHHRESTEAPRARMQRSSFQQGHKE
PAAASPPRAVASFSVRVLGQPDSQGHPATAPPGQEKAAASLSSPRAPQQALNLSRSARSS
ADNHVQNDSDEDDNDDDSDDDEDWGPSSGGARKRKAAVPSKQQVAASMSSSAAARSKRKL
QPPQHIPPPQVHDTPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDDQERDGVRDPGMASFP
PPAMQRQDSDSSSGSSSPEPPAKRRSGPLSLLMHRMESEEATSSPGFSGETAHSTATCSS
ESPLQSAETKRQQETREMEEEKQLKEEKESLKAQEREREKKRLEEEREKEKERKQLEEER
KQRLKEEQEKEKRHQEEENEKKRREEKRRETRLKEEEERKKVKNDRRAAAEEKDSGSSSD
SDSKSESSSHSSSSSSSSSSSRDKIQPASQLKKADQEQEPELHKKTEFRKDSEKPNLSKS
EVSEPSTAAVTEAEPDSESSMAQQPASGAEPESSESRMEESTTPKAFAARKISLSSSKAS
PASTDGGAGESETGSAAGRKRRWGSSTAVTVKKPSISITTDSLKSLIPDIKVNQEAVVDL
HPEELQMSGDEENSDAGRSDPDKGLKIRRTVTQVVPTESQENGQPNVEEEMEKSEDEKQH
KTSRDTKKSSLSDETSEPLMSVKVEGEPKKVSPSDSLVRRSISQQKSGVSVTIDDPVRAA
RQPSPPRGKVSNIIHVINLVRPFTLLQLKELLNRTGSVVEEGFWIDKIKSHCYVTYTTTE
EAVATRTALHGVKWPPSNPKVLGVDFCEQDELDYHKGIRKPEKDQDHAAPAAPPQPRLPP
LMPVRDRDKDQDRERDRERDRERDRGVRDLLAERQREMERRERARGEREWDRDKVREFAR
PGEDGRRSRSRERERRRRERAKSKEKKTDKKEKGDEPPAKLLDDLFLKTKAAPCIYWLPL
TEEQANQRLSDRVERQKERERKRKELEEEEDKKRDEEKKERLKGREKDGGGSSSGAAASS
GVAGKGGDADRERGRDREGDKRRDSNHRSRRPSPGPASARRSRSRSNPRDRRR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacagtcgctccgagttgctgat
ttgaaagctgctctggagcaaaggaacctaccgaaaagcgggcagaaaaacactctcata
aagagacttaagggggctctgatgctggaaaacctccagaggtcatcgtcttctcacagt
gggctgcagcctaactctcagataggagaagagatgtgtcagaacagtttcatcaaacag
tacctggcccagcagcaagagctcctgcgtcagagacttgcgagagaggctaaaaaagaa
gaggaggctgatgaaagcgcaactggaccagaagaggatgaagaccactcggaagacaat
gacagcccttcctttgtcagtaagcatccaggcaccctggaccagcccccggctcccgag
gccggaggagaaaatttggtgattggtcaccgacctgccgctgcgtcccaccaccgagag
tccaccgaagctccaagagccaggatgcagcggtcctccttccagcagggacacaaggag
ccagcggccgcctcccctcctcgagccgttgcctccttctcggtgcgtgtcctgggacaa
ccggacagccagggacacccggccacggcgccccccgggcaggagaaggccgctgcctcc
ctaagctctcccagagcgccccagcaagcgctcaatctcagccgatctgcgcgtagttcg
gctgacaaccacgtccagaacgacagcgacgaagacgacaacgacgatgacagcgacgac
gacgaggactgggggcccagttctggaggggcgcggaagagaaaggcggcggttccctcg
aagcagcaggtggctgccagtatgtcgtcatcagctgcggcgagatccaaacgcaagctc
cagcctcctcagcacatcccacctccacaggtccacgacactcccatgcagctgcgccac
cccacacctcctccatctccgcctccgaatctgttccccctgcccgacactccaaagcaa
agcccccccgacgatcaggaacgagacggtgtacgcgacccaggaatggcgtccttccca
cctcccgccatgcagaggcaggactccgactccagctccggctccagcagccccgaacct
cctgcgaagcgtcgctccggcccgctgtcactgctcatgcacaggatggagtcagaggaa
gcaacctcatcccccgggttctccggagaaacggcacactcgactgccacgtgttccagc
gaatccccccttcaatcagcggaaaccaaaaggcaacaggaaaccagagagatggaggaa
gagaaacagctgaaggaggagaaggagagtcttaaagcacaggagcgagaaagagagaag
aaacgcttggaggaggagagggagaaggagaaggagagaaaacagctggaagaggagagg
aagcagcggctgaaagaggaacaggaaaaggagaaaagacaccaggaagaggaaaacgaa
aagaaacgcagggaggagaagagacgagagacgaggctgaaagaggaggaagaacggaaa
aaagtgaagaacgaccggagagcagcagctgaagaaaaagattcaggttcctcctctgat
tccgactccaaatcagagtcctcttcacactcatcatcatcctcctcctcgtcttcctcc
tccagggataaaattcagcctgccagtcagctgaagaaagcagaccaagagcaagagcct
gagcttcataaaaagaccgagttcaggaaagactcagagaaacccaacctttcaaaaagt
gaggtgtctgaaccgagcacagccgctgttacggaagcagagccggactctgagagctcc
atggcccagcagccagcttctggggctgagccagagagcagcgagagccgcatggaggag
agcaccactcctaaggcttttgcagctcgcaagatctccctgtccagcagcaaggcgtct
ccggccagcacggatggaggagcgggagagtccgaaacaggaagtgcagcagggaggaag
aggcggtggggctccagcacagcagtcacggttaagaagccatcgatcagcatcaccact
gactccctgaagtctttgattccagacatcaaggtgaaccaggaagcagtggtggacctt
caccccgaggagctgcagatgtccggagacgaggagaactccgacgccggtcggagcgac
ccagacaaaggtctcaagatccgacgcaccgtcacgcaggttgttcccactgaaagccag
gaaaacggccagcctaacgtagaagaagaaatggagaaatcggaggacgaaaaacaacac
aagacttccagagacacaaagaagagcagcctctctgatgaaacgtccgaaccactgatg
tcggtcaaagtagaaggagagccaaagaaagtgtctcccagcgacagtctggtgcgacgc
tccatcagccagcagaagtctggcgtttccgtcaccatcgacgaccccgtgcgcgccgcc
aggcagccgtcgccgcctcgagggaaggtttccaacatcatccacgtcatcaacctggtc
cgaccgttcactctgctccaactcaaagagctgctgaaccgaacggggagcgtggtggag
gaaggcttctggatcgacaagatcaagtctcactgctacgtcacgtacacgacgacggag
gaagcagtcgccaccaggacagctcttcatggagtcaaatggccgcctagcaaccccaag
gtgctgggcgtggacttctgtgagcaagatgagctggattatcacaaaggcatccggaag
ccggagaaagaccaggatcacgctgccccggctgcccctcctcagccccggctgccccct
ctgatgcctgtgcgagacagagacaaagaccaggacagggagcgagaccgcgagcgggac
cgggagagggacaggggcgtgcgggacctgctggcagagcgacagagggagatggagcgg
cgggagcgggcgcgaggagagcgggaatgggaccgggacaaggtgcgggaatttgcgaga
cccggagaggacggccggcgatcgcgatccagagagagggagcgcaggaggcgggagcga
gccaagagtaaagaaaagaagaccgacaagaaggaaaaaggagatgagcctcctgctaaa
ctgctggatgacttgttcctcaagaccaaagcggctccctgtatatactggctccccctc
actgaggagcaggcgaaccagaggctttcagaccgcgtggaacggcagaaggagcgcgag
cgaaagcgcaaggagctggaggaggaggaggacaaaaaacgtgacgaggagaaaaaggag
aggctgaagggccgggagaaggatggcggcggcagcagcagcggggccgcagcgagcagc
ggggtggctgggaaaggaggcgatgccgacagggagcggggccgagacagagagggggac
aagaggagggacagcaaccaccgatccaggcgaccctcgccggggcccgccagcgcccgg
cgttcccgtagccgcagcaacccccgggacaggcgccgctga
DBGET
integrated database retrieval system
