Gambusia affinis (western mosquitofish): 122820166
Help
Entry
122820166 CDS
T07758
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122820166 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122820166 (dhx15)
03009 Ribosome biogenesis [BR:
gaf03009
]
122820166 (dhx15)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122820166 (dhx15)
Spliceosome [BR:
gaf03041
]
Complex A
U2 snRNP components
U2 related factors
122820166 (dhx15)
Complex B
122820166 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122820166 (dhx15)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
90S particles
Helicases
122820166 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_19
AAA_22
Flavi_DEAD
nSTAND3
AAA_29
SRP54
AAA_7
Motif
Other DBs
NCBI-GeneID:
122820166
NCBI-ProteinID:
XP_043953305
LinkDB
All DBs
Position
LG18:complement(16231084..16263626)
Genome browser
AA seq
688 aa
AA seq
DB search
MRRDRDQINPFTNLPHTPRYHEILKKRLQLPVWEYRDVFTEILMQNQSFVLVGETGSGKT
TQIPQWCVDMVRSLQGPSRAVACTQPRRVAAMSVAQRVSDEMDIMLGQEVGYSIRFEDCS
SAKTILKYMTDGMLLREAMKDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLK
VIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPQPERDYLEAAIRTVIQIHMCEE
EEGDILLFLTGQEEIDEACKRIKREVDNLGPQVGDMKIIPLYSTLPPQQQQRIFEPPPPN
NPNGAFGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSAISKASAQ
QRAGRAGRTRPGKCFRLYTEKAYRTEMQDNTYPEILRSNLSSVVLQLKKLGIDDLVHFDF
MDPPAPETLMRALELLNCLAALNDNGDLTELGSMMAEFPLDPQLAKMVIASCEFNCSNEI
LSITAMLSVPQCFVRPTEAKKVADDAKMCFAHIDGDHMTLLNVYHAFKQNHESTQWCYDN
FVNYRSLMSADNVRQQLSKIMDRFNLPRNSADFNSRDYYLNIRQALVTGFFMQVAHLERT
GHYLTAKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRMCTDVKPEWLVKIAPQYYE
MSNFPQCEAKRQLEHIIAQLSSKEYTQF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtgacagagaccagataaaccccttcaccaacctgccccacacaccgcgctac
catgagatcctaaagaagcgactgcagctcccagtctgggagtacagagacgtctttaca
gaaatcttgatgcagaaccagtcattcgtgctggtcggagagacgggctctggaaaaacc
actcagatcccacagtggtgtgtagacatggtgcgttcgctgcaggggcctagcagagcg
gtggcctgcacgcagcccaggagggtggcggcaatgagcgtcgcccagagggtgtcagat
gaaatggatatcatgctgggtcaagaggtgggctattccatcaggtttgaggactgcagc
tctgccaaaactatattaaagtatatgacagatggaatgttgctgcgggaggctatgaaa
gatcccctgctggagcgctatggtgtcatcattctggacgaggcccacgaacgcacatta
gccacagacatcctcatgggggttctcaaggaagtagtccgccagaggtctgacctcaag
gtcatcgtcatgagtgcgacgctggacgccgggaagttccaagtgtattttgacaactgc
ccgctgttaaccatccctggacgcacgcaccccgtggagattttttacacaccgcagccc
gagcgagactacctggaggcggccatccgcaccgtgatccagatccacatgtgcgaggaa
gaagaaggggacattctgctcttcctcactggacaggaggaaatcgacgaagcctgcaag
cgaatcaagcgtgaggtcgacaacctggggccccaagtcggcgatatgaaaatcatcccc
ctgtactccaccctaccaccgcagcagcagcagagaatctttgagccgcctccaccaaat
aacccaaacggcgcttttggaagaaaggtcgttgtgtcaacaaacattgccgagacgtcc
ctgaccatcgacggagtggtgtttgtaattgatcccggatttgccaagcaaaaggtgtac
aacccacgcatcagagtggaatcccttttggtctcagccatcagcaaggcctcggctcag
cagagagcgggtcgcgctggacgaacgcgcccaggaaaatgtttccgcttgtacacagag
aaagcttacaggacagaaatgcaggacaacacatatccagagatcctgaggtctaatctc
agctccgtggtgctgcagctgaagaaactgggcattgatgatcttgtgcactttgacttc
atggaccctccagccccggagaccctgatgcgagcgctagagctgctgaactgcctggca
gcgctcaacgacaacggtgacctgaccgagctgggctccatgatggcggagttccccctg
gacccacagctcgccaagatggtcatcgccagctgtgaattcaactgttccaatgagatc
ctctccatcaccgccatgctgtcagtcccacagtgcttcgttcgacccacggaggccaaa
aaggtggctgatgatgccaagatgtgctttgcccacatcgacggagaccacatgacgtta
ctcaacgtttaccacgcctttaagcagaaccacgagtccacccagtggtgctacgataac
tttgtaaactaccgctcgctgatgtcagcagacaacgttcggcagcagctgtcaaagatc
atggatcgcttcaacctgccaagaaacagcgccgatttcaacagcagagactattatctc
aacatccgacaagcactggtcactggctttttcatgcaggttgctcaccttgagcgcacc
ggccattacctgacggcaaaggacaaccaggtggtgcagctgcacccctccactgtgctg
gaccacaaacctgagtgggtgctctataacgagttcgtcctcaccaccaaaaactacatc
cgtatgtgcacagacgtcaagccggagtggctggtgaaaattgccccgcagtactatgag
atgagtaacttccctcagtgtgaagcaaaaagacagttggagcatattattgcacaactc
tcatccaaggaatacactcagttctaa
DBGET
integrated database retrieval system
