Gambusia affinis (western mosquitofish): 122820193
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Entry
122820193 CDS
T07758
Name
(RefSeq) tenascin-X-like
KO
K06252
tenascin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122820193
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122820193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122820193
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122820193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Lectin_C
PixA
2L_N_poxvirus
Motif
Other DBs
NCBI-GeneID:
122820193
NCBI-ProteinID:
XP_043953344
LinkDB
All DBs
Position
LG18:18727197..18747075
Genome browser
AA seq
2713 aa
AA seq
DB search
MHYSLCFILGALLSIAFAQTRQYYFVGSAQTWTNAQSVCRQDYTDLATIENLADVDAVLR
TNPSYSGKAWIGLYDELYNSWKWSLTDSSFYGAGEYTFRNWISGSPNNFGGQQYCVRFLS
DSFYLGGWDDRQCSDLRRFLCYTGIVGGSPSYFVSTQSLNWTEAQRFCRENYIDLASIRN
QAENNNIRTLLGGIEVWIGLYRDKLWSDSSPSLFQHWAAGQPDNDNSRCVAASFSDMGKW
LDEDCAQSFPFICYKPIPANTEGFRASSQNESSITLQWNKISNSISFVLQFNGTETNIRA
PDGDGPVNYTVSSLTAGTKYTFILFSVLNNVRSSGISTAAVTTPRNTEAVRVSDQDENSI
TLQWNKINNNTSFVLQFNGSETNIRAPDGFGPVNYTVSSLTAGTKYTFSLLSVFENVRSS
GVQLAAVTAPQNAERFTSLRQDETSITLQWDIINNNVSFILQYNETELNIAAPAGNQPLL
LTVSSLTAGTRYTFTLFSVFENVRSSGVSIAAVTAPVNAEGFRASEQNETSITLQWNRGD
NNTSFVLQFNGTETNIRTPDGDEPVKHTVTSLTAGTKYTFRLFSLFENVRSSGVQYEAVT
APRNTEAVRVSDQDESSITLQWNKINNSTSFVLQFNGSETNIRAPDGDGPVNYTVSSLTD
GNKYTFSLFSVFENVRSSGVSIAAVTAPENAEGFRASEQNETSITLQWNKGDNNTSFVLQ
FNGTETNIRAPDGDEPVKHTITSLTAGTKYTFSLFSVFENVRSSGVQYEAVTAPRNTEAV
RVSDQDESSITLQWNKINNSTSFVLQFNGSETNIRAPDGDGPVNYTVSSLTDGNKYTFTL
FSVFENVRSSGVSIAAVTAPENAEGFRASEQNETSITLQWNKGDNNTSFVLQFNGTETNI
RAPDGDGPVKHTVTSLTAGTKYTFILYHVFMNVRSSAVNITVATAPTNAEGLRVSEQDES
SITLQWNIINNSTSFVLQFNGSETNIRAPDGFGPVNYTVSSLSAGNKYTFSLFSVFENVR
SSGVQLTAVTAPQNAERFTSLRQDETSITLQWDIINNNVSFILQYNETELNIAAPAGQQP
LLLTVSSLTAGTRYTFTLFSVFENIRSSGVSIAAVTAPENAEGFRASEQNETSITLQWNK
GDNNTSFVLQFNGTETNIRAPDGDGPVKHTITSLTAGTKYTFILYHVFMNVRSSAVNITV
ATAPTNAEAVRVSDQDESSITLQWNKINNSTSFVLQFNGSETNIRAPDGFGPVNYTVSSL
TAGTKYTFSLFSVFENVRSSGVQLTAVTAPQNAERFTSLRQDESSITLQWDIVNNNVSFI
LQYNETELNIAAPAGNQPLLLTVSSLTAGTRYTFTLFSVFENVRSSGVSIAAVTAPENAE
GFRASEQNETSITLQWNKGDNNTSFVLQFNGTETNIRAPDGDGPVKHTVTSLTAGTKYTF
ILYHVFMNVRSSAVNITVATAPTNAEGLRASEQDENSITLQWNKINNSTSFVLRFNSKDT
FIRAPDGDEPVTHTVSSLTAGTKYTFSLFSVFENVRSSGVQYETITAPDNAEGLRASGQD
ESSITLQWNKINNSTSFVLQFNGSETNIRAPDGFGPVNYTVSSLTAGTKYTFSLFSVFEN
IRSSGVQYEAVTAPTNAEGFRSSDQDETSITLQWNKINNSNSFVLQFNGIQTFIRAPDGD
GPVTHTVSSLSAGTRYTFTLFSVFENIRSSGVSIAAVTAPENAEGFRASEQNETSITLQW
NRGDNNTSFVLQFNGTETNIRTPDGDGPVKHTVTSLTAGTKYTFILYHVFMNVRSSAVNI
TVATAPTNAEGLRVSDQDESSITLQWNKINNSTSFVLQFNGSETNIRAPDGDGPVNYTVS
SLSAGNKYTFRLLSVFENVRSSGVQYEAVTAPRNTEAVRVSDQDESSITLQWNKINNSTS
FVLQFNGSETNIRAPDGFGPVNYTVSSLSAGTKYTFSLFSVFENVRSSGVQLTAVTAPQN
AERFTSLRQDESSITLQWDIVNNNVSFILQYNETELNIAAPAGQQPLLLTVSSLTAGTRY
TFTLFSVFENIRSSGVSIAAVTAPENAEGFRASEQNETSITLQWNKGDNNTSFVLQFNGT
ETNIRAPDGDGPVKHTVTSLTAGTKYTFILYHVFMNVRSSAVNITVATAPTNAEGLRASD
QDENSITLQWNKINNSTSFVLQFNSKETFIRAPDGDEPVTHTVSSLTAGTKYTFSLFSVF
ENVRSSGVQYETITAPDNAEGLRASGQDESSITLQWNKINNSTSFVLQFNGSETNIRAPD
GFGPVNYTVSSLTAGTKYTFSLFSVFENIRSSGVQYEAVTAPTNAEGFRSSDQDETSITL
QWNKINNSNSFVLQFNGIQTFIRAPDGDGPVTHTVSSLSAGNKYTFSLFSVFENIRSSGV
SIAAVTAPENAEGFRASEQNETSITLQWNKINNSTSFVLQFNGSETNIRTPDGDGPVKHT
VTSLTAGTKYTFILYHVFMNVRSSAVNITVATAPTNAEGLRASEQNENSITLQWNKINNS
TSFVLQFNSIQTFIRAPDGFGPVNYTVSSLTAGTKYTFRLFSVFENIRSSGVQLTAVTAP
KNAEGFRASEQNETSITLQWNKGDNNTSFVLQFNGTETNISSPAGNGPVKHTVTSLTARS
NYTFTLFCVFENVRSSGVSIFAATGPNYVLGWSLRLKLLRAMRESEMEDVLIELFRKYNL
PPQFTLKIVSSDP
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atgcattactcattatgttttattttaggtgcactcctcagcattgcctttgcccaaact
cgtcagtactactttgtaggctctgcacaaacctggacaaatgcccagagtgtctgcaga
caggactacaccgacctggccaccattgaaaacttggccgacgttgatgctgttctcagg
acaaatcccagctattcaggcaaagcttggataggtctctatgatgagttgtacaacagc
tggaaatggtccctgactgacagcagcttctatggagctggagagtacacgtttagaaac
tggatttctggctctcccaataacttcgggggacagcagtactgtgttaggtttttaagt
gacagcttttatttgggtggatgggatgaccgtcagtgctcagacctaagacgtttcttg
tgttacactggtatagtcggtggctcgccatcttattttgtcagtacccagtcactgaat
tggaccgaagctcagcgattctgcagagagaattatattgacctagccagtatacgaaat
caagcagaaaataataacatcagaacactactaggtggcatcgaagtgtggattgggctt
tatcgggacaaactgtggtcagatagcagcccctccctgtttcaacactgggcggccggt
cagccagacaatgataacagtcggtgtgttgctgcttcattcagcgacatgggaaaatgg
ttggatgaagactgcgcccagagttttccattcatctgttacaaaccaatcccagccaac
acagagggcttcagagcatcaagtcaaaatgagagcagcatcactctgcagtggaataag
ataagcaacagcatcagctttgttctccagtttaacggcacagagacaaacatcagagca
ccagatggagatggaccagtaaactacacagtgtcatctctcactgctggaaccaaatac
acattcatactcttctctgtgcttaataatgtcagaagtagtggaatcagcactgctgca
gttaccactcctagaaacacagaagctgtgagagtatcggatcaagatgagaacagcatc
actctgcagtggaataaaatcaacaacaacaccagctttgttctccagtttaatggatca
gagacaaacatcagagcaccagatggatttggaccagtaaactacacagtgtcatctctc
actgctggaaccaaatacacattcagtctcttatctgtgtttgagaacgtcagaagcagt
ggagtacaacttgctgctgtcactgcccctcaaaacgcagaaagattcacatcactgaga
caggatgagaccagcatcactctgcagtgggatattatcaataataatgtcagtttcatc
ctccaatataatgaaacagagttgaatatagcagcacctgctggaaatcaaccattactt
ctgacagtttcgtctctcactgctggaactagatatacattcactctgttctctgtgttt
gagaacgtcagaagcagtggagtcagcattgctgcagtgactgctcctgtaaatgcagag
ggcttcagagcatcagaacaaaatgagaccagcatcactctgcagtggaatagaggagac
aacaacaccagttttgttctccagtttaacggcacagagacaaacatcagaacaccagat
ggagatgaaccagtgaaacatacagtcacatctctcactgctggaaccaaatatacattc
aggctcttctctctgtttgagaacgtcagaagcagtggagtacaatatgaagctgttact
gctcctagaaacacagaagctgtgagagtatcagatcaagatgagagcagcatcactctg
cagtggaataaaatcaacaacagcaccagctttgttctccagtttaatggatcagagaca
aacatcagagcaccagatggagatggaccagtaaactacacagtgtcatctctcactgat
ggaaataaatacacattcagtctcttctctgtgtttgagaacgtcagaagcagtggagtc
agcattgctgcagtgactgctcctgaaaatgcagagggcttcagagcatcagaacaaaat
gagaccagcatcactctgcagtggaataaaggagacaacaacaccagctttgttctccag
tttaacggcacagagacaaacatcagagcaccagatggagatgaaccagtgaaacataca
atcacatctctcactgctggaaccaaatatacattcagtctcttctctgtgtttgagaac
gtcagaagcagtggagtacaatatgaagctgttactgctcctagaaacacagaagctgtg
agagtatcagatcaagatgagagcagcatcactctgcagtggaataaaatcaacaacagc
accagctttgttctccagtttaatggatcagagacaaacatcagagcaccagatggagat
ggaccagtaaactacacagtgtcatctctcactgatggaaataaatacacattcactctg
ttctctgtgtttgagaacgtcagaagcagtggagtcagcattgctgcagtgactgctcct
gaaaatgcagagggcttcagagcatcagaacaaaatgagaccagcatcactctgcagtgg
aataaaggagacaacaacaccagctttgttctccagtttaacggcacagagacaaacatc
agagcaccagatggagatggaccagtgaaacatacagtcacttctctcactgctggaacc
aaatatacattcatactctaccatgtgtttatgaatgttagaagcagtgctgtaaacatc
accgttgctactgctcctacaaatgcagaaggtttgagagtatcagaacaagatgagagc
agcatcactctgcagtggaatataatcaacaacagcaccagctttgttctccagtttaat
ggatcagagacaaacatcagagcaccagatggatttggaccagtaaactacacagtgtca
tctctctctgctggaaataaatacacattcagtctcttctctgtgtttgagaacgtcaga
agcagtggagtacaacttactgctgtcactgcccctcaaaacgcagaaagattcacatca
ctgagacaggatgagaccagcatcactctgcagtgggatattatcaataataatgtcagt
ttcatcctccaatataatgaaacagagttgaatatagcagcacctgctggacaacaacca
ttacttctgacagtttcatctctcactgctggaactagatacacattcactctcttctct
gtgtttgagaacatcagaagcagtggagtcagcattgctgcagtgactgctcctgaaaat
gcagagggcttcagagcatcagaacaaaatgagaccagcatcactctgcagtggaataaa
ggagacaacaacaccagctttgttctccagtttaacggcacagagacaaacatcagagca
ccagatggagatggaccagtgaaacatacaatcacttctctcactgctggaaccaaatac
acattcatactctaccatgtgtttatgaatgttagaagcagtgctgtaaacatcaccgtt
gctactgctcctacaaatgcagaagctgtgagagtatcagatcaagatgagagcagcatc
actctgcagtggaataaaatcaacaacagcaccagctttgttctccagtttaatggatca
gagacaaacatcagagcaccagatggatttggaccagtaaactacacagtgtcatctctc
actgctggaaccaaatacacattcagtctcttctctgtgtttgagaacgtcagaagcagt
ggagtacaacttactgctgtcactgcccctcaaaacgcagaaagattcacatcactgaga
caggatgagagcagcatcactctgcagtgggatattgtcaataataatgtcagtttcatc
ctccaatataatgaaacagagttgaatatagcagcacctgctggaaatcaaccattactt
ctgacagtttcatctctcactgctggaactagatacacattcactctgttctctgtgttt
gagaacgtcagaagcagtggagtcagcattgctgcagtgactgctcctgaaaatgcagag
ggcttcagagcatcagaacaaaatgagaccagcatcactctgcagtggaataaaggagac
aacaacaccagctttgttctccagtttaacggcacagagacaaacatcagagcaccagat
ggagatggaccagtgaaacatacagtcacttctctcactgctggaaccaaatatacattc
atactctaccatgtgtttatgaatgttagaagcagtgctgtaaacatcactgttgctact
gctcctacaaatgcagaaggtttgagagcatcagaacaagatgagaacagcatcactctg
cagtggaataaaatcaacaacagcaccagctttgttctccggtttaacagcaaagacaca
ttcatcagagcaccagatggagatgaaccagtaactcacacagtttcatctctcactgct
ggaaccaaatacacattcagtctcttctctgtgtttgagaacgtcagaagcagtggagta
caatatgaaactattactgcacctgataatgcagaaggtttgagagcatcaggtcaagat
gagagcagcatcactctgcagtggaataaaatcaacaacagcaccagctttgttctccag
tttaatggatcagagacaaacatcagagcaccagatggatttggaccagtaaactacaca
gtgtcatctctgactgctggaaccaaatacacattcagtctcttctctgtgtttgagaac
atcagaagcagtggagtacaatatgaagctgttactgcacctacaaatgcagaaggcttc
aggtcatcagatcaagatgaaaccagcatcactctgcagtggaataaaatcaacaacagc
aacagttttgttctccagtttaatggcatacagacgttcatcagagcaccagatggagat
ggaccagtgactcacacagtgtcatctctctctgctggaactagatacacattcactctc
ttctctgtgtttgagaacatcagaagcagtggagtcagcattgctgcagtgactgctccc
gaaaatgcagagggcttcagagcatcagaacaaaatgagaccagcatcactctgcagtgg
aatagaggagacaacaacaccagctttgttctccagtttaacggcacagagacaaacatc
agaacaccagatggagatggaccagtgaaacatacagtcacttctctcactgctggaacc
aaatacacattcatactctaccatgtgtttatgaatgttagaagcagtgctgtaaacatc
accgttgctactgctcctacaaatgcagaaggtttgagagtatcagatcaagatgagagc
agcatcactctgcagtggaataaaatcaacaacagcaccagctttgttctccagtttaat
ggatcagagacaaacatcagagcaccagatggagatggaccagtaaactacacagtgtca
tctctctctgctggaaataaatacacattcaggctcttatctgtgtttgagaacgtcaga
agcagtggagtacaatatgaagctgtaactgctcctagaaacacagaagctgtgagagta
tcagatcaagatgagagcagcatcactctgcagtggaataaaatcaacaacagcaccagc
tttgttctccaatttaatggatcagagacaaacatcagagcaccagatggatttggacca
gtaaactacacagtgtcatctctctctgctggaaccaaatacacattcagtctcttctct
gtgtttgagaacgtcagaagcagtggagtacaacttactgctgtcactgcccctcaaaat
gcagaaagattcacatcactgagacaggatgagagcagcatcactctgcagtgggatatt
gtcaataataatgtcagcttcatcctccaatataatgaaacagagttgaatatagcagca
cctgctggacaacaaccattacttctgacagtttcatctctcactgctggaactagatac
acattcactctgttctctgtgtttgagaatatcagaagcagtggagtcagcattgctgca
gtgactgctcccgaaaatgcagagggcttcagagcatcagaacaaaatgagaccagcatc
actctgcagtggaataaaggagacaacaacaccagctttgttctccagtttaacggcaca
gagacaaacatcagagcaccagatggagatggaccagtgaaacatacagtcacttctctc
actgctggaaccaaatacacattcatactctaccatgtgtttatgaatgttagaagcagt
gctgtaaacatcaccgttgctactgctcctacaaatgcagaaggtttgagagcatcagat
caagatgagaacagcatcactctgcagtggaataaaatcaacaacagcaccagctttgtt
ctccagtttaacagcaaagagacattcatcagagcaccagatggagatgaaccagtaact
cacacagtttcatctctcactgctggaaccaaatacacattcagtctcttctctgtgttt
gagaacgtcagaagcagtggagtacaatatgaaactattactgcacctgataatgcagaa
ggtttgagagcatcaggtcaagatgagagcagcatcactctgcagtggaataaaatcaac
aacagcaccagctttgttctccagtttaatggatcagagacaaacatcagagcaccagat
ggatttggaccagtaaactacacagtgtcatctctgactgctggaaccaaatacacattc
agtctcttctctgtgtttgagaacatcagaagcagtggagtacaatatgaagctgttact
gcacctacaaatgcagaaggcttcaggtcatcagatcaagatgaaaccagcatcactctg
cagtggaataaaatcaacaacagcaacagttttgttctccagttcaatggcatacagacg
ttcatcagagcaccagatggagatggaccagtgactcacacagtgtcatctctctctgct
ggaaataaatacacattcagtctcttctctgtgtttgagaacatcagaagcagtggagtc
agcattgctgcagtgactgctcctgaaaatgcagagggcttcagagcatcagaacaaaat
gagaccagcatcactctgcagtggaataaaataaacaacagcaccagctttgttctccag
tttaatggatcagagacaaacatcagaacaccagatggagatggaccagtgaaacataca
gtcacatctctcactgctggaaccaaatatacattcatactctaccatgtgtttatgaat
gttagaagcagtgctgtaaacatcactgttgctactgctcctacaaatgcagaaggtttg
agagcatcagaacaaaatgagaacagcatcactctgcagtggaataaaatcaacaacagc
accagctttgttctccagtttaacagcatacagacgttcatcagagcaccagatggattt
ggaccagtaaactacacagtgtcatctctcactgctggaaccaaatacacattcaggctc
ttctctgtgtttgagaacatcagaagcagtggagtacaacttactgctgtcactgcacct
aaaaatgcagaaggcttcagagcatcagaacaaaatgagaccagcatcaccctgcagtgg
aataaaggagacaacaacaccagttttgttctgcagtttaacggcacagagacaaacatc
agttcaccagctggaaatggaccagtgaaacacacagtcacttccctcaccgctcgttca
aactacactttcactcttttctgtgtgtttgaaaatgtcagaagcagtggagtcagcata
tttgcagctactggtccaaactatgttttgggatggagtctgaggttgaagcttctcaga
gcaatgagagaatcagaaatggaagatgttttgatagagctcttcagaaaatataatctg
ccgccacagtttactctgaaaattgtttcttccgatccataa
DBGET
integrated database retrieval system