Gambusia affinis (western mosquitofish): 122820199
Help
Entry
122820199 CDS
T07758
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04814
Motor proteins
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122820199
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122820199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122820199
03036 Chromosome and associated proteins [BR:
gaf03036
]
122820199
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122820199
Membrane trafficking [BR:
gaf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122820199
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
122820199
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
122820199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
122820199
NCBI-ProteinID:
XP_043953354
LinkDB
All DBs
Position
LG18:complement(18808818..18824690)
Genome browser
AA seq
1263 aa
AA seq
DB search
MSSTGSVESVKPPKIGSKVEVTGKGQQGTVAYIGATLFASGKWVGIILDEPKGKNDGTVQ
GKRYFTCEENHGIFVRSSQIQVIDDGSAATSPETPDASLAKTLKQKDIPETPKTTKQTPA
NVKKSSTRRSAKWSMPGLSPATSLPSLLPRPSRPSIKLRASRESLVAPLLGDVSEVNLSS
QQVALVAPVTPQPSSSPSVAPQAPVTPSKEEDSLRALVKDLEEKLETLKIKRTEDKAKLK
ELEKYKIQLEQLQEWKTKIQEQQADLQKQLKEAKKEAREAQEAKDRYMEEMADTADAIEM
ATLDKEMAEERAESLQVEVDSLKERVEELSMDLEILRHEISEKGTDGAASSYQVKQLEEQ
NSRLKEALVRMRDLSASEKQEHVKLQKQMEKKNTELESLRTQKEKLQEELKQAEATVDEL
KEQVDAALGSEEMVETLTERNLDLEEKVREMRETVTDLEAINEMNDELQENARETEMELR
EQLDLSTAKVREAEKKVEAAQETVADYQHTISKYRELTASLQEANRELVSQQSANTEQTQ
QPSAELFDFKIKFAETKAYAKAIEMELRKMEVAQANRQVSLLTSFMPDSFLRHGGDHDCI
LVLLLIPRLICKAELISKQAHEKFDLSGGLVQGTALRGSPGEQRSFASGLVYSLGLLQAT
LHKYEQALNSCRVEVFKRMGTLYSEMSFHERSLDYFIDLLHKDQLDETVQVEPLTKAIKY
YQQLYSVHLADQNEDCTVQLADHIKFTQGALDCMGVEVARLRAFLAPGQESSGLAVLLKD
LDTSCSDIRQFCKKIRRRMPGTDVAGVPAALSFGSQVSESLKECRSQLTRVVAVLQEVAA
AGAQMVAPLAEQEGLNALKLEDITYKAAEQVFGSQGVNGPELLRQSCSSVITTMNKMATA
MQEGEYDAEKPQGKAPPVDKRAAIVRAEMTDAEGLGVKLEDRETVIKELKKSLKIKGEEL
SEANVRLSLLEKKLDTSTKDADERVEKIQTKLDDNLALLKKKEKEFEETMDALQADIDQL
EAEKAELKQRIQNQSKMTIEGLRGSPSSGIASLVQGSTSLPPTLAGPTQVVDSPLLRQQL
EVQRLGIKYLKNENNRLKAEKMKAQLASLPPLCPPKLPQVSKESSSSPEGLNSGIYRRTD
QLLATLLKLSAEVKVVDITGKTAVSASAQLLEQTARLKNLKDALDKLQGEVAEHVVSNQP
GAKASSDFATFPASSFIKAKEEKQGRTVFVGRVAIPCTRGQEQVHRLVLSQQQLQQVHNL
LMV
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccggatcagtggagagtgttaaacctccaaagatcggctccaaagtcgag
gtgactggtaagggccagcaaggtaccgttgcctacatcggtgccaccctgtttgcttcg
ggcaaatgggtcggcatcattctggatgagcccaaagggaagaacgatggcaccgtgcaa
gggaagcgctacttcacctgtgaggaaaatcacgggatatttgtcaggtcatcccagatc
caagtcattgacgacggctccgctgccacctcaccagaaacccctgatgccagcttggca
aagacgctcaaacaaaaagacattcctgagactcccaaaacaacaaagcagacaccagcg
aacgttaagaagtcctctacccgccgctctgcaaagtggagcatgccaggtctctcgcct
gctacttccctcccctccctcttgcctcgtcccagccgcccctccataaagctccgggca
tctcgtgagagccttgtagcccctctgcttggagatgtcagtgaggtgaacctgtcctcc
cagcaggtggcactggttgcccctgttacacctcagccaagcagctctccgtctgtggct
cctcaagctccagtcactcccagcaaggaggaagactcgctgcgagctctcgtaaaggat
ctggaggaaaagctggagactctgaagataaaacgaacggaggacaaggccaagctgaag
gagctggagaaatacaagatccagctggagcagctgcaggagtggaagaccaagatacag
gagcagcaggcagatttgcagaagcagctcaaagaggccaaaaaggaagcccgggaggcg
caggaggccaaagaccgctacatggaggagatggcagacacggcggacgccatcgagatg
gcaaccctggacaaagagatggctgaagagcgagccgagtcgctgcaagtggaggtggac
tcactgaaggagagagtagaggagctctctatggacctggagatcctcaggcatgagatc
tcagagaaaggtacagatggagctgcctccagttatcaagtcaagcagctggaggagcag
aacagcaggctgaaggaagccttggtcaggatgcgcgacctgtcggcctcagagaaacag
gaacacgtgaagctgcagaagcagatggagaagaagaacacggagctggagagtctgagg
actcagaaggaaaaactgcaggaagaactcaaacaggctgaagccacagtggatgaactg
aaggagcaggtggacgctgctctggggtcagaggagatggtggagacgctgactgagagg
aacctcgacctggaggagaaagtcagggagatgagagagacagtcactgatctggaagcc
atcaatgaaatgaacgatgagctgcaggaaaacgccagagagacagagatggagctgagg
gagcagctggacctgagcactgcgaaggttcgagaggcagagaagaaggtggaagctgct
caggagactgtggccgactaccagcacaccatcagtaaatacagagagctcaccgcctcg
cttcaggaagccaacagggagctggtcagtcagcagagtgcaaacacagagcaaacccaa
caaccgtctgctgagctgttcgacttcaagatcaagtttgctgagaccaaagcctatgct
aaggccattgagatggagctgaggaaaatggaggtggctcaggcgaacagacaggtttcg
ctgctcacctccttcatgccggactccttcctccgtcacggtggagaccacgactgcatt
ctggtgctgctgctcatccccaggctcatctgtaaggcggagctgatcagtaaacaggct
catgagaagtttgacctgagcggcggtctggtccagggaacggcgctcagaggatcacca
ggagagcagcgcagcttcgcctcaggactggtctactccctcggccttctgcaggccact
ctgcacaaatatgagcaggctctgaactcctgcagggtggaggttttcaaacgaatggga
acgctttactctgaaatgagcttccatgagcgctcgctggattacttcattgacttgctg
cataaagatcaactggatgagactgtccaggtggaaccccttacgaaggccatcaaatac
taccagcaactgtacagcgtccatttggcagatcagaatgaggactgcactgtgcagctg
gctgatcacattaagttcacccagggagccctggactgcatgggggtagaggtggcacgc
ctgcgggcgttcctggcaccaggacaggagagctcaggcctcgccgtcctcctgaaggac
ctggacacttcctgctcagacatcagacagttctgtaagaagattcgccgccgtatgcct
ggaacagacgttgctggagtccctgctgccctcagcttcgggtcacaggtgtctgagtcg
ctgaaggagtgcaggagtcagctgacccgtgtggtggcggttctgcaggaagtggctgca
gccggggctcagatggtggctccgctggcagagcaggagggcctcaacgccctgaagctg
gaggacatcacttacaaggctgcagagcaggtatttggctcccagggtgtgaacggacca
gagcttctgcgacagtcttgcagctctgtcatcacaaccatgaacaagatggccaccgcg
atgcaggaaggagagtatgatgctgagaaaccacaaggaaaggctccgccggtggataag
cgagccgccattgtcagagcggagatgaccgacgcagaaggtctgggagttaaactagaa
gacagagaaacggtcattaaggagctcaagaaatccctcaagattaagggcgaggagctg
agcgaagccaacgtccgcctcagcctcctggagaagaagctggacacgtccaccaaggac
gcagacgaacgcgtggagaagattcagaccaaactcgacgacaatctcgccctgctcaag
aagaaagagaaagagtttgaggagacgatggacgctctgcaggcggatattgaccagctg
gaggcagaaaaggctgagctgaagcaacgcatccaaaaccagtcaaagatgacgattgaa
gggctgagaggctctccgagttcaggaatcgcctccctcgttcagggatctacaagtctg
cctccaaccctggcaggaccaacgcaggtggtcgactcccctctcctccgacagcagctt
gaggtccagagactgggcattaaatacctgaagaatgaaaacaacaggctcaaggcggag
aagatgaaggctcagctcgcgtccctgcctccactctgccctccgaaactcccacaggtg
tccaaagaaagctcatcatctccagagggactgaactctgggatctaccgcaggaccgac
cagctgctggccaccctgctgaagctgagtgcagaggttaaggtggtggatatcacaggg
aagacagcagtcagcgccagcgctcagctgctggagcaaacggctcgtctgaagaatctc
aaagacgccctggacaaactacagggtgaggtggctgaacatgtggtttcaaaccagcca
ggagcaaaggcttcctccgacttcgccacattcccagcgtcctctttcattaaggctaag
gaagagaagcaaggaagaacggtttttgtgggtcgcgttgccatcccgtgcacccgcggt
caggagcaagtccaccgcctagtcctgtcgcagcagcagctgcagcaagtgcacaacctc
ctcatggtctaa
DBGET
integrated database retrieval system
