Gambusia affinis (western mosquitofish): 122820419
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Entry
122820419 CDS
T07758
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122820419 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122820419 (slx1b)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122820419 (slx1b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-RING-like
T5orf172
FANCL_C
PHD_NSD
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122820419
NCBI-ProteinID:
XP_043953753
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All DBs
Position
LG18:complement(2783552..2786380)
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AA seq
264 aa
AA seq
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MMVVEVESFFGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNAGRHKGGAKRTSGRGPWE
MVLIIHGFPSDIAALRFEWAWQHPHSSRRLSHVSRRSKRETSLQFHWRVVSNMLRVAPWS
RLPLTVRWLRQEYRMDFDPGLQPPLHIPIAFGSVRAKKKQSLPSAGEDEDVMSVCFLCEA
MVKVSEKLSCFLPSCGMVSHVICLARYFLRSEPSHLLPVEGQCPSCHGSVLWGSLIRHKH
GCLGDLEEIVSSTSQNHWTDELQM
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgatggtagtagaggtggagagcttcttcggtgtgtacatgctttactgcactaacccg
aaatttaaaggccgtatctacatcggcttcacggtcaaccctgagcggcggattggacaa
cacaacgccggaaggcacaaagggggggccaaaagaaccagtggcagggggccgtgggag
atggtactcattatccatggcttcccttcagatatagctgctctgaggtttgagtgggcg
tggcagcaccctcactcttccagaagactttcccatgtctcccgacgttccaaaagagaa
acgagcctgcagttccactggcgcgttgtctccaacatgctgcgggtggcgccatggagc
aggctgcctctgactgtccgctggctcagacaggagtataggatggactttgaccccggc
ctgcagcccccacttcacatccccatcgccttcggcagcgtgagggccaagaagaagcag
tcactgccatctgcaggtgaagatgaagatgtgatgtctgtgtgtttcctttgcgaggcg
atggtaaaggtgtcagagaagctgagctgtttccttccatcctgtgggatggtcagtcat
gtaatctgcctggccagatatttcctgaggtccgagccgtcccacctcctgcctgtagag
ggacagtgtccttcctgccatggctcggtgctgtgggggagcctcatccgccataaacac
ggctgcctcggagacctggaggagatcgtttcctccacatcccagaaccactggacagat
gaactacagatgtga
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integrated database retrieval system
