Gambusia affinis (western mosquitofish): 122820420
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Entry
122820420 CDS
T07758
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122820420 (igdcc4)
Cell adhesion molecules [BR:
gaf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
122820420 (igdcc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
SusE
Adeno_E3_CR2
Ig_ILCR1
DUF4903
Motif
Other DBs
NCBI-GeneID:
122820420
NCBI-ProteinID:
XP_043953757
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All DBs
Position
LG02:26100505..26157323
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AA seq
1241 aa
AA seq
DB search
MAVESIIWLFCLLSLYWGPTKQEKPVSVELSCEAGPSHVVLELGLPLLLDCNLGSSDTPS
NVTWFKDGQPLPQAPGDRLQYLTNGSLLLSPTSAGSQPPRNVEGSYSCVSASAIGALTSR
TVNVLLAGLSSFSQEPSPQAVTTGGSARFECQIEGVPTPVITWQKDKVTITDETRFISLP
NGVLQILKVTKEDEGFYRCVASNSERKNISREARLTVTTGSIDSPSPVVIVAPPQNATVV
LGHPAVMECVAQGQPKPLVSWSREDGKPISTDVIVLATNLVIRDTRRHHAGVYVCRANKP
KTREFVFAAAELRVAAPPVIVQPPESVSLSRGNTARFLCNSSGEPFPVLHWLKNGQPIRS
FRRMKVQSPGVLLISQLALEDAGYYQCIAENGLGKACATARLTVIVKEGLPSLPRRLTAT
PHSSTTALLSWEKPEYNADQIIAYSVHYQLTAGSDNQDSSFAVSNDTTEYLVKELLPHTA
YTFFVVAYSPMGASPPSLPITIEMLEDVPSAPPQLSVASTSPTDFRLTWQPLTSQHSRGA
VTRYRIDYSALDQKDTVYSVELRGNETQFTLRELRPNQVYRLRIAAGTAVGFGVPSEWVQ
QQTIVRNGASDSSTVIFAPSELKVRARVTTLNVTWQPSPNHTLVSGYKLSYREAETDEFS
IRDRTPHTHTIRLRKKARHHLLTGLVPDRQYEVRVWAFDKQKDGAAAVWKGRTDKIHGRP
SGPSSSPPLPPSSIQATANSSTSIWLRWEKPRFINVRIINFTVRCSPAGTTNASLVSYYT
SSSLEILLRGLRPFTHYELAVRSNGANTAGPFSSTMVEATLPDRPSSPPEELQLRALNSS
SVLVSWRPPLEPNGIIVSYKILYTVNLSEPEDEWRNLSEGGGIFSVEVHGLSGGTRYFLK
VGASTKVGSGPFSPVMDVQTPLPTYELDVHAVTGIIVGVCLGLICILLCMCFSFRNSKPR
EPSGGLSSTAVTPQCRKGGCPAPAGVPECSDSHELETLMPPGTQESGQQPTKDPEEQSLM
IAWNGSVSHNWVNRITRYRDTITEESPALMNGALNMFIAATGMEADDHLSTSLCSNQVEA
EVIVHSELSDPSGREKGEGSERDSIATQGPSLSEDVYSPLSRPSSPREEAEHLENLSARG
AESPPSPPARTLAAHRNEEAEGARQQQNGDREPQLDTCLTNGFHSPKTPRPMLKSEHLEM
EESRHCPSAAGKAISAGLPSTPFVSPGFVHSTSAAHIYLCP
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagagtattatttggctgttctgtcttctttcgctgtattggggtccaacc
aagcaagaaaagcctgtttcagtggaactgagctgtgaagctgggcccagccatgtggtt
ctggagctaggtttgccacttttgctggactgcaacctggggtccagcgacactccttcc
aatgtcacctggttcaaggatggccagcccctgccacaggcgccaggagatcgcctgcag
tatttgaccaacgggtccctcttgttgtcgcccacctccgcaggcagccagcctccccgg
aacgtagagggcagttacagctgtgtgagtgccagcgccatcggagccctgaccagccgg
actgtcaacgtgctgcttgcaggtctgtccagcttcagtcaggagccgtcgccacaagcg
gtgaccactgggggttctgctcggtttgagtgccagattgagggagtacccacacctgtc
ataacatggcaaaaagacaaagtgactatcactgacgagacaaggttcatttctcttcct
aatggggtgctgcagattctgaaggtgactaaagaggatgagggcttctaccgctgtgtg
gcatccaactctgaaaggaaaaacatcagccgcgaagctagactcactgtcacgacaggc
tccattgacagtccaagcccagtagtgattgttgcgccaccccagaatgccacagtggtg
ctcggccatcctgctgtgatggagtgtgtggcacaaggccagccaaaaccattggtgtca
tggagcagagaagacggaaagcccatttccacagacgtgatcgtccttgccacaaacctg
gtgattagggacacgaggcgtcaccatgccggcgtctacgtctgccgagccaacaagccc
aaaactagagagtttgtctttgctgctgccgagttgcgcgttgctgcccctccagtgatt
gtacagcccccagagtctgtgtccctctccagagggaataccgccaggtttctgtgcaac
agctctggggaacctttcccagtgctgcactggctgaagaacggccaacccattagatct
ttcaggcggatgaaggtgcaaagccctggggtcctgctcatcagccagctggctctggag
gacgcaggttactatcagtgcatcgctgaaaacgggctcgggaaggcctgcgccaccgcc
aggctgacggtcattgtgaaggaaggtctccccagtcttcctcgccgcctgactgctacg
ccgcactccagcacaacggccctgctctcctgggagaaacccgaatacaacgcagaccaa
atcattgcctactctgtgcactaccaactcactgcagggtcagataatcaggactcttcg
tttgcagttagcaacgacaccacagagtatctcgtcaaagagctcctcccccacaccgcc
tacactttctttgtggtggcttattcgcccatgggagccagtcctccatcgctgcctata
accatagagatgcttgaggatgttcccagtgcacctcctcagctgtccgtcgcgagcacg
tcccccaccgacttcaggctgacgtggcagccgctgacgtcacagcacagccgaggggct
gtcacccgctaccgcattgattacagtgcgctggatcagaaggacactgtatactcagtg
gagctgaggggcaacgagactcagttcacgctcagggagctgcgccccaaccaggtttac
cgactgaggatagctgctggaaccgctgtgggcttcggcgtgccgtctgagtgggtccag
cagcagacaatagttcgcaacggcgccagtgacagcagcacagtgatttttgctccttct
gagctgaaggtcagagccagagtgaccactcttaatgtgacatggcaaccctcaccaaat
cacacgctggtttctggctacaagctctcctatcgggaagcggaaactgatgagttctcc
atcagagacagaacgccgcacacacacaccatcaggcttcggaagaaggcgaggcaccac
ctgctgacggggctcgttcctgaccggcagtatgaggtgagggtctgggcattcgacaag
caaaaggatggagcagctgcagtgtggaagggaaggacggataagatccatggtagacct
tccgggccgtcctcgtcccctccgttgccccccagcagcatccaagctacggccaacagc
tccacctccatctggctccgttgggagaaacctcggttcatcaacgtgcgcatcatcaac
ttcacggtgcgctgcagcccagcaggaaccaccaacgcctctcttgtctcttattacacc
agttcctctttggagatcctgctcaggggactgaggccttttacccactatgagctggca
gtgcggtctaatggagcgaacactgcaggacccttcagcagcaccatggtggaggccacc
ctgcctgaccggccgtcctcgccacctgaggagctgcagctgagagctctgaactcctcg
tccgtgctggtgagttggcgccctccgctggagccaaatggcatcatcgtcagctacaag
attttgtacaccgtcaacctgagtgagcctgaagacgagtggaggaatctctccgagggt
gggggcatctttagtgtggaggtccacggtttgtcagggggaactcggtacttccttaaa
gtgggagcttccacaaaagtgggatcagggcctttttcacccgttatggatgttcagact
cctctgcccacgtatgagctggacgttcacgcggtcacaggcatcatagtcggcgtttgc
ttgggacttatttgcatcctcctctgcatgtgtttcagcttccgaaacagcaaaccccga
gagccgtctggaggcctgagctccacagctgtgactcctcagtgcaggaaaggcggctgc
cccgctccagccggtgtgcccgagtgcagcgatagccacgaactggagacactgatgcct
ccaggcacccaggagtcgggtcagcagccaacaaaagacccggaggaacagagtctgatg
atcgcttggaatggctctgtgagccataactgggtcaacaggatcacccgatacagagac
actataacagaagagtctccagcgctgatgaacggagcgctcaacatgttcattgctgcg
actggcatggaagcagacgatcatctctccacgtctctgtgcagtaaccaggtggaggca
gaagtcattgtgcactctgagctgtcagaccccagtgggagggagaagggggagggcagc
gagcgggattctatcgccacccagggaccgtcgttatcagaggacgtgtattcccctctg
agtcggccgagttcgccgagagaagaggcggagcacctcgaaaacctttctgctcggggg
gctgaaagtcccccgagtcctcccgcaagaacattggcggctcatcgcaatgaggaggca
gaaggtgccaggcaacagcagaacggcgacagggagccacagctggacacatgcctcacc
aatggcttccactctcctaagactccaaggcccatgctgaaatctgagcatctggaaatg
gaagagtccagacactgcccatccgctgcagggaaggctatctctgccggactaccttct
acacccttcgtcagccccggcttcgtgcactctacctcagctgctcacatatatctgtgc
ccttaa
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