Gambusia affinis (western mosquitofish): 122820428
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Entry
122820428 CDS
T07758
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122820428 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122820428 (taf6l)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122820428 (taf6l)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122820428 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
122820428 (taf6l)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122820428 (taf6l)
STAGA complex
122820428 (taf6l)
TFTC complex
122820428 (taf6l)
SAGA complex
122820428 (taf6l)
SLIK complex
122820428 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
122820428
NCBI-ProteinID:
XP_043953766
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All DBs
Position
LG18:complement(2847082..2854254)
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AA seq
639 aa
AA seq
DB search
MADREERRFAEVSRDSVKLMAESTGVDLADDVAALLAEDVCYRLREAAQTSSQFMRHAKR
RKLTVEDLNRALRWSRVEAVCGYGAQDALPFRSVKEGELFFVEDREINLIELALATNIPK
GCAETMVRVNVAYLDGKGNVEPQGTVPTAVQTLSDDLLKYYQQITRAILGDDPHLMKMAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKAVSLSQSAEGGSSCQPGSGAGSAGYRVGSPGLSPPSEPLSEAVLGIA
SHLQAGGAGCPWEEWSPVPLPAMYSELYSFFGDSLAVRFSTGPGFGSYPPCASACFREAR
KDPLGPAANTDTARKMPQLTANLNISPRQDGSPRTDPPPPSLAATGAGRSLARSSSVQRS
RSSSSRSGQRSASVSRDVFPKARFISPQSGPPAFSFVIGGRQMGRRCQGRRPFQTTFSSS
SSLPANPPRAYAHKLPVIGRVGKPVRRWTCSHYSLYLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgcgaggagcggcgctttgctgaggtttcccgggactccgtcaagctcatg
gcagagagcaccggcgtggatcttgctgatgatgtagcggctcttcttgctgaagatgtg
tgttaccgcctcagagaggcagcccagacaagttcccagttcatgagacatgccaagagg
aggaagctgacggtggaggacttgaacagagccctgcgatggagccgtgtggaggccgtc
tgtggttacggggcgcaggacgctctgcctttccgatccgtcaaagagggagagctgttc
tttgtcgaggaccgtgaaattaacctgatagagctggccctggccaccaacattcccaaa
ggttgtgctgagaccatggtgcgagttaatgtggcgtatctggatggcaaaggcaacgta
gagcctcaggggacagttcccaccgctgtgcagactctgtcagatgacctgctcaagtac
taccagcagatcaccagggccatcctgggagatgacccccacctcatgaagatggctctg
ctcgaccttcagtccaactcaaagattgctgctctgctgccatactttgtctatgtcatc
agtggagtcaaatcagtaagccacgacctggagcagctcaacaggctcctgcacatggtg
aagagcctggtccagaacccgtacctgtacctgggctcatacgtccgcagcctggtctcc
agtgtcatgtactgcatcctggagccactcgccgcctccatcaacccactcaatgaccac
tggaccctccgggactacgcagccctgctactcagccacatcttctggactcacggtgat
ctagtgagtggtctctaccaccagatcctgctctctctccagaaggttctctctgaccca
gtcaggccactctgctcccattacggagcggttgtgggccttcacgctctgggttggaag
gctgtggaaagagttcttttcccacacctccctgcttactgggccaacctgcaggctgtg
ctggacgattactcagtgtccaacgcacaggtcaaagcagatggacacaaggtctacgga
gccatcctggtggcagtggagcgtctgctgaagatgaaggctgtgtctctgtcccagtca
gcagagggcggatccagctgccagccgggttctggagccgggtctgcggggtacagggtg
ggctccccaggcctcagtcctccgtcagagcctttgtcagaagccgttctggggattgcc
agccacctccaagcaggcggcgcgggctgcccctgggaggagtggtccccagtccctctt
ccggcgatgtacagtgagctttactctttctttggggacagtctggccgtcaggtttagc
acaggaccagggtttgggagctatcccccctgcgcttcggcctgtttcagggaagcccgg
aaggatccgctgggcccagctgcaaacaccgacactgcccggaaaatgccgcagctgacc
gccaacctcaacatcagcccacgacaggatgggagccctcgcaccgaccctccccctccg
agcctagcagccacaggagcaggaaggtctctggctcgctcctcctctgtacagcgctcc
agatcatcctcatcacgttcgggccaacgctccgccagtgtttctcgggatgttttcccc
aaggctcgtttcatctcgccacagtcaggacctccagcattctcctttgtcattggtgga
cggcaaatgggtcgacggtgccagggccgccggccctttcagaccacgttttcctcgtcc
tcctctctgcctgccaacccgccccgcgcttacgcccataagcttccggtaattggccgg
gtggggaaaccggtgcgtcgctggacgtgttcacattactcgctttacctgcctctgtag
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