Gambusia affinis (western mosquitofish): 122820496
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Entry
122820496 CDS
T07758
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122820496 (fxr2)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122820496 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
122820496 (fxr2)
mRNA cycle factors
Stress granule specific factors
122820496 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
122820496
NCBI-ProteinID:
XP_043953892
LinkDB
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Position
LG18:complement(3759625..3779097)
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AA seq
681 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPLNPNSP
ASRNTFHKMTIPVPEDLRDICASDSVHKDFRKAIGANCIFYCAQTHDLIVLSTNDTTVKR
ATLLSDMHFRSIRTKLILMSRNEEATKHLETSKQLAAAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQAREYLEFKEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTAGSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAAPSRPAGPGGDREKGYMTDE
SSNSLHASRTYGGRGRGRRPSNTQYSGYGTNSELSNASESEDVNDRDLRPRGIGGDERGS
RRGGRGRGANSGRGRGGPAAKPSNSISSVLRDPDSNPYALLEGEGELADADLSEGMVGDR
HRRSRRRRNDQEPSVMDAATESDNQAGPSENGLGENHPVCCKQLKVKLLQNLKPVLPKAS
ESSGSRPEGGSASRDRQPGESVTVADYISRPESQSRQNLPQKENHSGPEPKENGTSAKKE
ERTPSKRSPSKETPTLVNGVS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggacggactggccgtggaggttcgcggctcgaacggggccttctacaagggttttatc
aaagatgtccatgaagactctctcactattgtatttgaaaacaactggcagcctgagaga
cagctgcctttcagcgacgtgcggctgcctcctccagccgactaccacaaagacattggc
gaaggcgaggaggtggaggtttactccagggccaacgaacaggagccgtgcgggtggtgg
ttagcacgggtcaggatgatgaagggggagttttacgtaatcgaatacgcagcttgcgat
gccacatacaacgagattgtcacgtcggagcgcatcaggcctctgaaccccaacagcccc
gcctctcgaaacacgttccacaagatgaccatccccgtcccggaagacctgagggacata
tgtgcaagcgatagcgttcacaaagacttcaggaaagctattggagccaactgcatcttc
tactgcgctcaaacacatgatctcattgtcctgtctacaaatgacacaacggtaaagcgt
gcgacactcctgagtgacatgcatttccgcagcatccgcaccaagctcatcctaatgtcc
cgcaacgaagaagccaccaaacatttggagaccagtaagcagctagcagcagcgtaccag
gaagaggtccgagtcagagaggacctgatgggcctcgccattggttcccacggtgccaac
atccagcaggccaggaaagtgcccggagtgacggccatcgagcttgaggaggagagctgc
accttcaggatctacggagagactcctgaagctgtgaagcaggcgagagaatatctggag
ttcaaagaagattatttccaggttcccaggaaccttgtaggcaaagtcatcggaaagaac
ggcaaagtcatccaggagatagtggacaagtcgggcgtggtccgcgtccggatcgaggga
gacaacgacaaaaaacttccccgggaggaggtaggcaggcagggggctggcagagacgac
actgccggcagcaaagagggcatggttccctttgtgtttgttggtactaaggaaaacatc
agcaatgctcaggccttgttggagtaccatgtgtcctacctgcaggaggtggagcagctg
cgcctcgagcgcctccagattgacgagcagctccgtcagatcggggtgggataccgcgcg
gcccccagccgacccgctgggcccggcggcgaccgggagaaaggttacatgacggacgag
agcagcaactctctccacgcatcgcgtacctacggcgggcgtggccgaggacgaagaccc
tccaatacacagtactctggatacggcacaaactccgaactgtcaaatgcttccgagtcg
gaggacgtcaacgaccgtgacctgaggccccgtggcatcggtggggacgagagaggttcc
agacggggaggcaggggccgaggcgcaaactcgggacgggggcgcgggggccccgcagcc
aaaccctccaactcgattagctcagttctgagggatccagacagcaacccatacgctctg
ctggagggagagggcgagcttgcagacgctgacctcagcgagggcatggtgggggaccgc
cacagacgctcccgccggcgccgtaacgaccaggagcccagcgtgatggacgccgccacg
gagtcggacaatcaggccggccccagtgagaacggactaggtgagaaccacccggtgtgt
tgcaaacagctgaaagtaaaacttctccagaacttaaagccggttttgccaaaggctagt
gaatcgagtggcagccggccagagggagggtccgccagtcgtgacaggcagccgggagaa
agtgtgaccgtagccgactacatatcccgtcctgagtcccagagccgacagaacctgcct
cagaaggagaaccactctggacctgaacccaaggagaacggaaccagtgcaaagaaggag
gagcgaacgccctctaagcgttctcctagcaaagagacgccgactttggtcaacggggtc
tcataa
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