Gambusia affinis (western mosquitofish): 122820514
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Entry
122820514 CDS
T07758
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122820514 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122820514 (nudt21)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
122820514 (nudt21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
VitK2_biosynth
Motif
Other DBs
NCBI-GeneID:
122820514
NCBI-ProteinID:
XP_043953930
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All DBs
Position
LG02:complement(15026572..15031281)
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AA seq
219 aa
AA seq
DB search
MSVVQPSRSSTGWPRRGGEQFGGKYISGPAKPLTLERTINLYPLLPRKDSSVAARFQRMR
EEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEI
LGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVP
KNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgtgcagcccagtcgctcgtccaccgggtggccgcgccgcggcggagagcag
ttcgggggcaaatacatcagcgggcccgctaaaccgctcaccctggagcggaccatcaac
ctatatcctcttttgcctagaaaagacagctctgtggccgccaggttccagagaatgcgt
gaagagtttgataagatgggcatgcgccggacagtagagggagtcctcatcgttcacgag
cacaggctgcctcacgttctcctgctgcagctgggcacaacgtttttcaagctgcctggt
ggagagctgaatcctggagaagacgaggtggagggtctgaaacgcctgatgactgagatc
ctcgggcggcaagacggggtgaagcaggactgggtgatagatgattgcatcggtaactgg
tggcgccccaactttgaacctccgcagtacccgtacattccagctcacatcactaaacct
aaggagcataaaaagctctttttggttcagctgcaggagaaagcattatttgccgttccc
aaaaattataagctggtggctgctccgttgtttgaactgtacgacaacgctcctggatat
ggaccgatcatttccagtctaccgcagctactgagcaggttcaactttatctacaactaa
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integrated database retrieval system
