Gambusia affinis (western mosquitofish): 122820614
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Entry
122820614 CDS
T07758
Name
(RefSeq) protein translocase subunit SecA-like
Organism
gaf
Gambusia affinis (western mosquitofish)
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Gene cluster
GFIT
Motif
Pfam:
SecA_DEAD
P-loop_SecA
DEAD
Helicase_C
TPR_8
TPR_1
Motif
Other DBs
NCBI-GeneID:
122820614
NCBI-ProteinID:
XP_043954112
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Position
LG18:6484222..6489066
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AA seq
1185 aa
AA seq
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MDPRVIHRVVTSFLAPRLFTPNENEKSLVKLLQGLVRSIKWRPEDVSELFNALLQRFELV
NSNDRSHLLTWLLQMLHCIQVNYITPSWRSRTGRNLLELVRDTAVTNEALKACLGDDEDK
TLDEIIEEIRNGDFNQVNNELLAEIRDIVSSVQAALSSRSSGSELTGLRKVLLTLCQAAE
RSHFRPRLTQMVSWCLMAPSKTGRLIQVGTGEGKSCIVAMFAAYRALRGEKVDIMSSSSV
LAERDMREWKKFYELLKISVDCNINKQDEDSKKCYESQIVYGTAEQFTRDWLKHHVLRMD
IFGQRTFQCAIVDEVDSLMLDKGNDVLYLSSDMPALQHLNPLLALIWATANQYSKLGSGH
IVGRKYPFHQVVLKQLKQEGLDELTVLQIAEETGVLANGVVTEIQRKPNLLDEKIATTAN
VPADKLVEFFSAVETRFPSCQFVLHNLNTDGSVQELNRSSRGSGQRRVSLLLNGGFCQYM
YPDTDSVLRATEEEVRRFLHFTPRELNKSEGSCYIPGFLSKLVESKLKVWIENAFQAQSM
EKDDEYIFEGDIIVPEDYSSTDVVGNSLKWCDGLQQFLEMKHQTKISDMTIISNYMSNVG
LLQKYKSQIYGLSGTLGQQAEIETMRKTFQGIKTCQIPSYKRRKLFEVQGVIMKDERRWI
EKICEVVFDQIKPTPYRSPRAVLVTCESIKLAKLLYQIFSGRFSSTMLYIKNNKDNSVVF
KKKLGAGDVIIATNLAARGTDLQVSDSVKSAGGLFVVQTFLPDNSRVEAQGIGHTARQGS
PGSAQMVVCFTHLSEPLQLLILTRNLLSFMENIADASATFMQLFLMHLRQYQRSNTRGES
QEMSSLLYRILTENTNSDLMMIKEIRDALVAEQLSGYVESDLPNIKKKEELFNQYLDTLD
LLYKSNNNKPAESDVAALNEFWGMWLLTKFSGEGSVVRLKSILSADLSAALQKLRQRESP
SSNVHYYTAKGSELEKMGRLSESIDMYTKVINQDPCWAAVAFYNRASASLTQHNRTQDPE
CLRQVLEDLQKALMSVKLHTDQLDVTYRYVTQQTTNPAGNSTTRFDKQIMARHTVLVSFK
TNIYEAMQKIDRARDMSRSVRVKRTPVYFLVSLEHLLPMPVILLESARAIYSRNPLLRHQ
LANHPSLDIFNEVMSLESMGLTHVYVLEIPSSLATFFSKITRAFH
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagagtgattcaccgagttgtaacttctttccttgctccccgtttattcact
ccaaatgaaaatgaaaagagtctcgtcaagctgctgcaaggactggtcaggagtattaaa
tggagacctgaagatgtcagtgaactgttcaatgcccttctgcagagatttgagttggtg
aatagtaatgacagatcgcatctcctcacatggttgctccaaatgttgcactgcattcaa
gttaattacatcacaccctcatggagatccagaacaggaagaaaccttctggagttggtc
agagacacggcagtgaccaatgaagcactcaaggcgtgtttgggagacgatgaagacaaa
accttggatgagattattgaagaaatccgaaatggagactttaaccaagttaataatgag
ctgttggccgagatcagggatattgtctcatcagttcaagctgcccttagttcccgcagt
tcaggatcagagctgactggcctgagaaaagtcttgttgactctttgccaggcagcagaa
agaagtcacttcagaccacgactgacccagatggtgagctggtgtctcatggctccttcc
aaaacggggcgcctcattcaggtcggcactggagaggggaagtcctgcattgtggccatg
tttgcagcctatcgagctctgagaggagagaaagttgacatcatgtcgagttcatctgtt
ctagcagagagagacatgagagaatggaagaaattctatgaacttttaaagatcagcgtg
gactgcaacatcaacaagcaagacgaagactcaaaaaaatgttatgagagccaaattgtt
tatggtactgcagagcagttcactagagactggctgaaacaccatgttcttaggatggac
atatttggccagaggacattccagtgtgcaattgtggatgaggtggattccttgatgttg
gacaaaggtaatgatgttctttacttaagcagtgacatgccagctcttcagcatctcaac
cctcttctggcattaatatgggccactgctaaccagtacagcaaattagggtcaggccac
attgttgggcgaaaatacccctttcatcaagttgtattaaaacagctcaagcaggaagga
ttggatgagttgactgttcttcaaatagccgaggagactggtgtactggccaatggcgta
gttacggaaatacagaggaaaccaaatcttttggatgagaaaattgcaacaactgcaaat
gttccagctgacaagctggttgaattctttagtgcagtggagaccagattcccatcatgt
cagtttgttctacacaacctcaacacagatggatccgtacaagaactgaacaggtcatca
agaggaagtggtcagagacgagtgtctctgcttttgaatggtggcttctgtcaatacatg
tatcctgatacagacagtgtactgagagctacagaagaggaagtaaggcgttttctgcat
ttcacaccacgtgagctgaacaagtctgaaggcagttgctacatcccaggtttcctttca
aaactagtagaatctaaactaaaggtctggattgaaaatgccttccaagcacaaagcatg
gaaaaagatgatgaatatatctttgaaggtgatataattgtacctgaggactacagcagc
acagatgtggttggaaacagtttgaaatggtgtgatggtctacagcagttccttgagatg
aaacatcagacgaagataagtgatatgaccatcatctccaactatatgtccaacgttggt
ttgcttcaaaagtacaaaagtcagatttatggactgtctgggactcttgggcaacaagca
gagattgagaccatgaggaaaacatttcagggcatcaagacttgccaaatcccttcatac
aagcgcaggaagctgtttgaggttcagggagttatcatgaaggatgaaagaagatggatt
gagaaaatctgtgaagttgtatttgatcaaatcaagcctacaccatacagatctccaaga
gctgtgctagtgacttgtgagtccatcaagctagcaaagttactgtaccaaatttttagc
ggtagattctcaagcacaatgctttacatcaaaaacaacaaagacaacagtgttgtcttt
aaaaagaagttgggtgcaggtgatgtcattatagcaacaaacctggctgctcgtggaaca
gaccttcaggtttctgactctgtaaagtcagcggggggtttgttcgttgtgcaaactttt
ctgcctgataattcccgtgtggaggctcagggcattggacatacagctagacaaggatca
cctgggtctgcccagatggttgtctgcttcactcatctgtcagagcctctacaattgcta
attcttacacgtaaccttctgtccttcatggaaaatattgcagatgcgtctgcaactttt
atgcagttgtttcttatgcacttgcggcaatatcagaggagcaacaccaggggagaaagt
caagaaatgtcctcgctgctgtatcgtattttgactgaaaacaccaactctgatttgatg
atgattaaagagatcagagatgcgttagtggctgaacaactgtctggctatgtggagtct
gatctaccaaacataaagaagaaagaagagctcttcaatcagtacctggacacactggat
ctgctctacaagagcaacaacaacaaaccggctgaatcagatgttgccgcactcaatgag
ttttggggaatgtggctccttacaaaattttctggggaaggttctgttgttagattgaaa
agtatcctgagtgcagacctgagtgcagccttacaaaaactaaggcagagagagtctccc
tcatccaatgtccactactacactgccaaaggtagtgagcttgaaaaaatgggaaggctt
tcagagagtattgacatgtatactaaagtcataaaccaggacccctgttgggcagcagtt
gcattttacaatcgtgcttctgcatctttaacccaacacaacaggacccaagaccctgaa
tgtctccgtcaggttctggaagatttgcaaaaagctctcatgtctgtgaagctccacact
gaccagctagacgtcacttacagatacgtcacacagcaaaccacaaaccccgctggcaac
tcgacaacaagatttgacaaacagatcatggccagacacacagttctggtgtccttcaaa
acaaatatctacgaagcaatgcagaagatagacagggccagggatatgagcaggtctgtt
agagtgaagaggactcctgtctacttcctggtttctctggagcatcttcttcccatgcca
gtaatcttgctggagtcagccagggcgatttattccagaaaccctctgttgaggcaccaa
ctcgccaatcacccctccttagacattttcaatgaagtcatgagtcttgaatctatgggc
cttactcatgtctatgtcttagagataccgtcttctttggctaccttcttttcaaagata
actcgagcttttcactga
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