Gambusia affinis (western mosquitofish): 122820656
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Entry
122820656 CDS
T07758
Symbol
arhgef40
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122820656 (arhgef40)
Membrane trafficking [BR:
gaf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122820656 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
GCP_N_terminal
Spectrin
IQ_SEC7_PH
DHC_N2
Motif
Other DBs
NCBI-GeneID:
122820656
NCBI-ProteinID:
XP_043954162
LinkDB
All DBs
Position
LG18:complement(6328754..6376706)
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AA seq
1836 aa
AA seq
DB search
MNPVYCRAAPPPERVRSCKKVDLCGGCVHRTASLSPSRSRTDLQGVVYTRGGGGVTGQQR
KCLTLPRSYDRKLKAAYLCILICVGVSSEGDEPAVQHNTNPDGSEAMEDCVQGALSSLYP
PFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPAKHLLHKLQQHACSQYLGCLFLHSG
WPLCLGEKVVVQLSTLDWRLLRSNDFYLQVVPFSTRCPRLALKCLAPGGRTVQEILVPES
QHPLVFTSEWLHSINKERGHKREVGGGLDTCLVSTCDGVVRVPWKEIVYPKFLHDPSEEL
GLGSNRLSSEGGSSLGGWGGSSSGDMDSWSWDDEDDDSLPPRCMDSDPAIRRRRSEDGLG
RTARQPQMDGDYVELLEPRGGPDGGVDTKQRYLEMHGICKTRTLPLCRRGKAIKLRKGKA
WGYAKPERSGSFRGAYSTKEKEGNPKDDLPLPKPPTTVSGSARVRQSYSSSAHDSDEGDK
TSRDNNSLESRSPYFDVPLKERRPGVGKERDSNGFPQPSRDGHQNKDSQRSDSLIANEIY
DISHKSGHDVEGQSDHGSHSDSVFEDADKPLSGDSDAVTPTSDAPERLFTGVSESKDTAN
VQSKTRNSPKPKIPDERAEGQAEDRVCPRGKEVKTAGFRAPRRKRKGKGAKGKARSGGKN
QKGTKLQGKSPLPSPTAHSATTKLLIPEEKKAEETEKIDKLDDVPTTDTKGKENTRKGSG
AETDDGSLPVCNGQSSTSSFNHLTVEPGSPETCPDQINGVTYKELALLRELDAELLQSGK
LQLTGTVDRLGRALVFTDAGAFQEGFCSEEVARVLSCYHRITRPEAKEKGLTVLIDSRCS
QPSSLCLSALKRFQVLVPGGLGSALVLVEEQQESLSLALDGTETHIVRGTGVLQQYVDSQ
QLPKQLDGDFSHSHSDWLAFRLRLEKLTERCESALSLLGEALQSMETEEMPNDIKAVPQS
IDKHRQLMASVLADQRLTELQQRGGAWLAGLTNCSSGLAQRSPDCRAALNATSQLYDGVD
DALHRLVQVSNRRGRDLEALGRLAGMVHKLEKCDKEIEQVQSQLEEYKDPPLSLSRLSLK
QQKFRTFREMANELHSDTLSVLSDLEGWCELNWAGLSDIQIRLPPVREKLRDMSHCLSDC
WTTLDNTQRLLSTLTEATQWCDAVSSTPSSPTASSSTCPLASLPPIPPSRFQDARSLAME
LGGGALLDLWTQTVERYQRTVAQVKPRFLHSERTQSQGQGKAKTPSGSTFWDLVGPDGEG
DWGLGGGDGGLQSWGSLASLFRPQTCSTLKIGEDKGNRRDGSAGNGGGAGGGKFLQNLLN
PGKKSPPEAPLPPKPPRKRHPSFDLQALLAPRKGTATPKPESPVGGASRSSPMSWLGRKN
MADPVIATSMAAAIPGWGVGVAGGGGGGVLIRGVEVSSKEVVDHTGSPRQHVLLGRTERD
MGADRTGSTAQSKLYLLWCRMLSSERQYVAVLKGVEETYLPLLELSDTPASIRGKEDTLF
PNWGSLSAFHSRDLLPAMEGALVQSLLQQDCFSKYREEFLQYSHYIRSKPEMDSPLVTQA
ADFFKSKLPQASPLSPLSFPYCLQAPIQRLEQYCEALEELGGLNLASDSALSVLRHAQRH
GEDLRASDLIVGCPISVADRGDLVRQGELTVCGGPRRKRAGVRNVFLYQHAIIFTKQKSP
SPGRTAYNYKHSIKTSEMGLTQKVGDEGVKFEVWVRQAPRTRDCITLQAQDRAGRESWAH
DIAHLLWTHAINNTELCLKESLCMGVSSKLLLDATGTPGSELDSSCSLSDRVHSSCSDSS
SVGSQKEGGSPASGRDPRSSSGSTSYSQSLSPSTAV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgtttactgccgagcagctcctcccccagaacgcgtccgcagctgtaagaaa
gttgacctctgtggcggttgtgtccataggacggccagtctgagtccctctcgatcgcgc
actgacctccaaggggtggtctacacccgagggggagggggggtcaccggccagcagagg
aaatgtttgacactccccagatcttacgacaggaagctgaaagcggcgtatctgtgtata
ttaatatgtgtgggtgtcagcagcgagggagacgagccggctgttcaacacaacacgaac
ccagacggttcggaggcaatggaggactgcgtgcagggggcgctctcctcactttatccg
ccgttcgagagcacggcgccacccctcctctctcaggtcttctcggtcctggagtcaacc
tatcaacacgacagcctgcgctacctcctggactatttcgtacctgccaagcatctcctg
cacaagcttcagcagcatgcctgttctcagtatttgggatgcttgttccttcactccggc
tggcccctctgcctgggagagaaagtggttgttcagctctccaccttggactggaggctc
ctgcgcagtaatgacttctacctgcaggtggtgcccttttctacacgctgcccacgactg
gccctaaaatgtctggcacccgggggtcgcaccgtgcaagaaatcttggtgcccgagtca
cagcatcccctggtgtttacctctgagtggctccacagtatcaacaaagaacggggtcac
aagagagaagttggagggggactcgacacctgtctggtcagtacatgcgatggcgtggta
cgagtgccgtggaaggaaatagtctacccaaaattcctccatgacccttctgaggagctt
ggcctgggttccaaccgcctttccagtgaagggggcagcagcctcggagggtggggtggc
tcctcctcaggagacatggactcctggtcctgggatgatgaagacgatgacagtctaccg
ccacgctgcatggactctgaccctgccatcagacggcggcgcagcgaagatggccttggg
cggacggcgaggcagcctcagatggatggggattatgtggagcttttggagcccagagga
ggacctgatggaggcgttgacaccaagcagaggtatttggagatgcacgggatttgcaag
accagaactttgcccttatgcaggagaggtaaggccatcaaacttcgcaaaggaaaagct
tggggttatgcaaaacctgaaagatcgggaagctttcggggtgcctatagcaccaaggag
aaggagggaaatccaaaggatgacttgccactgccaaaacctccaacaacggtttcagga
tctgccagagtaagacagtcttactcctcctctgctcatgactcagatgaaggagataaa
acaagcagagacaacaatagcttggaaagccgcagcccttattttgatgttccattaaaa
gaaaggagacctggtgtgggcaaggagagagacagcaacgggttcccacaaccgtcccga
gatggacaccaaaataaagactcccagagaagcgacagcttaatagcaaatgaaatctac
gacataagccataaaagtggccatgacgttgagggccagtcggatcatggctcacattca
gactctgtgtttgaggacgcagataaaccactgagtggagacagcgatgctgttacgcca
acatcggacgcaccagagaggctatttactggagtctctgaaagcaaagatacagccaac
gttcagtctaagacgaggaactcaccgaagccgaagattccagatgaaagggctgaaggg
caggcagaggacagagtgtgtcccagaggaaaagaagttaaaacagccggattcagagct
ccacggaggaaacggaagggaaagggcgccaaaggaaaggctaggtctggtggcaaaaac
caaaaaggcacaaaactacagggtaaaagtcctctgccaagtcccacagcccactctgca
actacaaagctgctaatcccagaggaaaagaaggcagaggaaacagaaaagattgacaaa
cttgatgacgtgcccacaactgacactaaagggaaggaaaacacgaggaaaggcagtgga
gctgagacagatgatggatcgttgcctgtgtgcaatggtcagtcaagcacgtcttcattt
aaccacttgactgtggagcctggatcaccggagacgtgtcctgaccagataaatggtgtt
acctataaagagctggcgcttttaagggaactggatgcagaattacttcagtcagggaag
ctgcagctgacaggtacagtggacagattggggcgagctctggttttcacagatgcaggt
gcgtttcaggaggggttctgctcggaggaggtggcgcgggtcctttcctgttaccaccgg
atcactcggcctgaagccaaagaaaagggactaactgtgctaatagacagcagatgctcc
caaccatctagtctttgcctttctgctcttaaacggttccaggtcttggttcctggcggt
ttaggatccgcgttggtcctggtggaggagcagcaggagtccctttccttagctttagat
gggacagagacccacatagtgcgcggtacaggagtccttcagcaatatgtagacagtcag
cagctccctaagcagctggatggagacttcagtcacagtcactcagactggctggcattc
agactgaggttggagaaactgacagagcgttgtgagagcgccctctctctgctcggagaa
gccctgcagtccatggagacggaggagatgccgaatgacatcaaggctgttcctcagagc
attgacaaacacaggcagctcatggcgagtgtgctggctgaccaacgcctaactgaactg
caacagaggggcggagcctggctagcaggactgactaactgttcgtccggactggcgcag
aggtcgcctgactgcagggctgctctcaacgccacttcgcaactctacgacggcgtggac
gatgccctccatcggctcgtccaggtttccaaccggcgaggacgtgacctggaagcgctg
ggacgactggcaggaatggtgcacaaactggaaaagtgtgacaaggaaattgagcaagtg
cagtcccagctggaggaatacaaggaccctcctctgtctctcagcaggctgtcgctgaag
cagcagaagttcagaacgttcagagaaatggccaacgagctgcacagcgacactctgtcg
gtgctcagcgatctggagggctggtgcgagctgaactgggccggcctcagtgacatccag
atccgtctgccccctgtgagggagaagctgagagacatgtcccactgtctgtccgactgc
tggaccaccctggacaacacccagaggctgctgtccacactgacagaggcgacccagtgg
tgtgacgcggtctcctccaccccttcctcacccaccgcctcctcttccacctgcccgctg
gcgtcccttcctccaatacccccgtctcgcttccaggacgcacggtccttagccatggag
ctgggaggcggggccctcctggacctctggacccaaacagtggagcgctaccagcggacc
gtggcgcaggtcaaacctcgtttcctccactccgagcggacgcagagccagggccagggg
aaggccaagacgccatccggcagcaccttctgggacctggtggggcccgacggggagggc
gactgggggctcggaggaggggacggcggcctgcagtcctgggggtccctggcgtcgctg
ttcaggcctcagacctgctccacgctgaagataggagaggacaaagggaatcggagggac
gggtcagcggggaacggagggggagccggtggagggaagttcctgcagaaccttctgaat
cccgggaagaaaagtcccccagaggctccgctccctcccaagcctccccggaagcgccac
cccagctttgacctccaggctctcctggccccccgcaaaggcaccgccacccccaagccg
gagtcccccgtcggcggggcgagccgctcctcgcccatgtcttggctggggcgaaagaac
atggccgaccccgtcatcgccaccagcatggcggcggctattcctgggtggggcgtcgga
gtagcaggcggaggtggaggcggcgtgctgatccgaggtgtggaggtcagcagcaaagaa
gtggtggatcacacagggtctccgcggcaacacgtcctgctcgggaggacggagagggac
atgggggcagacaggaccggctccactgcacagagtaaactgtacctgctctggtgcagg
atgctgagctcagagcggcagtacgtggccgtcctgaagggggttgaagagacgtacctg
cccctgctggagctctccgacaccccggcctccatcagggggaaggaagacacgctcttc
cccaactggggcagcctcagtgcctttcactcgcgggacctgcttcctgccatggagggc
gctcttgtgcagagtttgttgcaacaggactgcttcagcaaatatcgggaggaatttctc
cagtattcccactacatccgctctaaaccagaaatggattcacctctggtcacacaggca
gctgacttctttaagtccaaactcccccaggcgtcccccctctcccctttgtctttccct
tactgcctgcaggctcccattcagaggctggagcagtactgcgaggccctggaggagctg
ggcggtttaaatctggcctcagactccgccctctccgtcctgagacacgcccagcggcac
ggcgaggacctcagggccagtgacctcatcgtcggctgtccgatctcagtggcagatcgt
ggcgacctggtgaggcagggtgagctcaccgtgtgcgggggacctcggaggaagcgggcg
ggtgtcaggaatgtcttcctctaccagcacgccatcatcttcaccaagcagaagagcccg
agtccgggtcgcaccgcctacaactacaagcacagcatcaagacgagtgaaatgggtcta
actcagaaagtcggcgatgagggagtgaagtttgaagtctgggtccgacaggcacccagg
accagagactgtatcacccttcaggcccaggatagagcaggacgggagtcctgggctcat
gacatagcccacctgctgtggacgcacgccataaacaacacagagctgtgtctgaaggag
tcgctctgcatgggagtttccagcaagcttctgctggatgctacaggaactccgggatca
gagctggactccagctgcagtctcagcgacagagtccacagtagctgctcagactcgtcc
tctgtgggcagccagaaggaggggggatccccagcgtctgggagggaccccaggtcaagc
tccggatcaacaagctattcacagagtctctctccctctacagctgtgtga
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integrated database retrieval system
