Gambusia affinis (western mosquitofish): 122820674
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Entry
122820674 CDS
T07758
Symbol
si:ch211-186j3.6
Name
(RefSeq) LOW QUALITY PROTEIN: neural-cadherin
KO
K27892
neural-cadherin
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122820674 (si:ch211-186j3.6)
Cell adhesion molecules [BR:
gaf04515
]
Cadherins
Cadherin related
122820674 (si:ch211-186j3.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
EGF
Cadherin_pro
CADH_Y-type_LIR
hEGF
Fibulin_C
Big_9
Laminin_G_3
He_PIG
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
122820674
NCBI-ProteinID:
XP_043954182
LinkDB
All DBs
Position
LG02:30169978..30470901
Genome browser
AA seq
3035 aa
AA seq
DB search
MGRKGSERRQTALLVRQQTEESRREGRTTQTRISHFQLEHAARRXQRSSLVKVFGSQQDG
GSLHIPPRDLGSKHGRRRGTSALSGVEPKRHPDMIWVTFLPFLMPCVAANRTSDLVPFFH
GHVFENSSPGSRVNGLSVPLKRLNSRRLCGTAQPGSAAAHYKLLGDRSEDFRVFAHHKRG
HVLLKTTQTLDREERAEYALSLGLCCGQCAEGEDASELVASIKVDVLDTNDHQPVFPSAN
MKLDLDDATALRAAICSLSARDGDSGKNAELIYFAEPKNGSFYAVPKTGDILLVDSILGL
EEPIKFQVFARDRGWPPRTSQGVSVEINPRQWPAARSATPGPRQQVEVQARKSRSVTEEE
TPVLISVSEDAGIGSVVVNLNPVRFQSAAFELVEPELESSPVSVSRDGGDVVIMRRLDRE
TEPLVEITVRVQDKRGLEWYLVRVELTVTDVNDNIPEWSMVPAPYLAVVSPDATAGSLVY
KLIAQDGDEGLNGEVEYFLSDGGDGRFEVDRKSGQIRTTGLPLQRDREYLLTVVAADGLG
SRSAPAIISVVAGARPPQFTNASFTIAIPENTPEGQPFLVTPAVSFQKKPISYSLLINPS
SLFSISADTGEISLTRTIDYESDQHRYLLLVRASEGQDSMSSAAEVRVVIVDENDCVPEF
LQSIYSKDGVPEMVTTATSLLQVSASDCDSGPNADLTYYTLSPDFIISPHGTIFPAGPLD
YERPNHLYEFVVMAIDKGDVPRTGTTTVRIRMANVNDEAPEFSQHIYRTFVSEDAGPNTL
VATVLAKDPDGDGITYKITTGNDEGNFVIDSQKGLIRLRSSPPPRLQGVEYVLNVTATDD
NASGGPQALASTAQVIVGVDDVNNNKPVFEQCQQYRESTSVLENQPAGSFVLQVHAVDAD
EGSNGRVTYGFMHKDSTVPAFSIHPDTGVIVTARKFDRERQREYAVTVTATDQAADPLIG
ICQLNILILDQNDNSPKFENLRYEYFLREDTMIGTSFLRVAAHDDDFGSNAAVTYTMSGE
LPEYLRVNPLTGWVYVNQPISQRTYITREIVATDGGNKSSSVELAVTITNVKNQPPQWEK
DTYSVVIPTQLLSDTPIKTIKATSPLGDPRVTYNLEDGMVPETNMPVRFYLTPNREDGSA
SILVAEPLDYETTRNFILRVRAQNVAAVPLAAFTTVYVNVTDVNDNVPFFTSSIYEASVT
EGAESGILIFQVSANDLDLGLNGKISYSLLEDRSGDHKYFRIDSEVGFIYSQAVFDRETK
SSYLLEVQSVDGWESSRPGKHGQPNSDTAYVRVFISDVNDNKPVFAQASYEVDVDEDADV
GFAILTVSANDGDEGGNAKLRYQITSGNTGGVFDVEPEVGTIFIAQPLDYEQNKRYKLHV
LASDGKWEDYTAVTVNVVNKNDESPVFTVNEYYGSVTEELDGSPVFVLQVTASDPDKDAD
QEALRYSLHGQGAESEFIIDEVTGKIYAQRTLDREERAVWRFVVLATDEGGEGLTGFTDV
IINVWDINDNAPIFPCALSCHGDVAENSAIGTSVMEMTATDLDDSAVGQNAVLSYRIVGI
LDATNAKLGGVPTISEMFSINPTTGTITVGLGGLDREQVESYLLLVEARDGGGMTGTGTA
TIQIADVNDHAPRFIDHSCQARISENSEPNTQVLELAAEDRDTGENAQLTFSIVAGDQEQ
KFYMVSHKQEQRGVLRLKKRLDYERHSEQKFNLTLKVEDLDFSSFLHCVVEVEDYNDHTP
VFIPHFLSLAPLPEDVSVGTSVARLVASDSDSGQNREITYSLSEDSDPEGLFTIDQSGLL
SVARPLDREKTAQHHLVVIATDHGMPALTGSATVQLPLLDVNDNGPEFEAAYSPVVFENV
AGPQVVRLNQTSVLLRAVDRDSPENGPPFHFTVPPEYRYGNDFYLQDNLNGTSTLTALRT
FDRERQKEFLLPIVMSDSGRPAKTVTSTLTVTIGDQNDHAHVAGEKQISINSHRGRMPTT
VLGKVYAPDPDDWDNKTYVFEGHMPSYFILNKRTGFLIIKENTLPGTYQFQVRVSDGVWP
DAVSTVTVYVRELRDEAIYNSASLRLADITAKEFMELRGKQRSRYELLVDFLSEMLSVPP
GEVNIFSLMDVKERMLDVRFAVSAGPSFLQPEKMHGYLAAHKQKLQSVLQVSVFQVRVDE
CPGSECAGSGGCTSVLEVRDAPTVVDCGTMSLVSVMVESKAVCSCPGREQSHQPCASYPR
NPCFNGGLCVDTQHGYRCQCPAQFEGPECQQNKHSFHGNGYAWFPPMMPCFESHVSLEFI
TDVADGLLLYSGPLAQLQAWDHEDFMAIELIDGTPTLKINHGSGTLVLQLPGNINVADRR
WHRLDVRSNSKEVRFTLDRCSGAAVMEMEGLGSWLTTEDHSSCEVMGVTPNTDRHLNTSQ
VLQLGGVNEDIPYIYPQLQHKHFTGCIRNLIVDSKLYDLGSPADWQSSSPGCLTTDSSCV
NMGFPACGHRGRCHGEWGSFSCQCVAGYTGQQCEEVAPEYSFDGHSHLHYQLASALPPRR
TWIQVLVRTRKHSSSIVSLVSRDQSEYLRLEVFQGLLCTFYNLGDGDYNLTLPSYRLDNG
EWHEVSLDRHDNEMTLRLDGGGGKREVTGSQSRSREIVIDPTAVMLGNSFPSESNRSFQG
CIRDLRLNGRYMPLDSQPLDGVSQVSVQGLSVGCSSDSCKKYHCKAPFTCVDLWRVHECR
CPPGHMIRVNGTKKSCVYTLCATRPCHRGTCVAQSPSKFTCHCPEGYRGRHCETTLAVYR
EDVGLSFSSLFAICICFMALLVLLLGIFLYTRWRSYKGLKEGVYHVSAHHDGWEDIRENV
LNYDEEGGGEEDQNAYDMAELQKSLQPSPAQSVQYCRSRALHHPPPTHHLHHHLLHQAPP
VPASAPPLDPLSRTSSSTTLPPSAASTSSTSTTAASLRRDVPPARPPAQGQARPSQLARR
SLSFSSQDLARYLCEIIRDADQHPDTGPFDSLQVFSTEGGGSPAGSLSSFSSAGLDGGST
GEGSGEARREETLGEWGPRFEKLRALYERAEASDL
NT seq
9108 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaaaggaagcgaacggagacagacagcactgctggtgaggcagcagactgag
gagagcaggagagaaggacgcacaactcaaacgcgcatctctcacttccagctggagcat
gctgccaggagatagcagcgctccagtctagtcaaagtttttggatcacagcaggacgga
gggagcctccacatccccccaagggatctgggaagcaagcatggacgtcggagaggcacc
agcgctttgagcggagtggagccaaagagacatccagacatgatttgggtcacgttttta
cccttcttgatgccttgcgtggcagcgaacaggacgtcggaccttgtgccgttctttcac
gggcatgtgttcgagaactcgtctcccggctcgcgggtcaacgggctcagcgtcccgctg
aagcgactcaactcgcgccggctgtgcggcaccgcgcagcccggctcggcggcagcgcac
tataaacttctgggagacaggagcgaggacttccgcgtctttgcgcaccacaaacgaggg
catgtacttctgaagacgacccagactctggaccgagaggagcgggctgagtacgccctg
agtctgggtctctgctgtggacagtgcgcggaaggggaggacgcgtccgaactcgtggcg
tccattaaggtggacgtcctggacaccaacgaccaccagcccgttttccccagcgccaac
atgaagctggatctggacgatgccactgccctgcgcgcggctatctgctcactgagcgcg
cgggacggcgacagcggcaagaacgcggagctcatctacttcgccgagcccaaaaacgga
agtttctacgcggtgcccaaaacgggggatatcctcctggtcgactccatcctcggtctg
gaagaacccattaagtttcaagtgtttgcgcgggaccgcggctggccaccccgcacgagt
caaggtgtctccgtggaaataaacccgcggcaatggcccgccgcgcgctctgcgaccccc
ggaccacggcagcaagttgaagtgcaagcgcggaagtcccgatcggtcacggaggaggaa
acgccggttctcatcagcgtgtccgaggacgcggggatcggttctgtcgtggtgaacctg
aacccggtcaggttccagtcggccgccttcgagctggtggagccggagctggagagctcc
ccggtcagcgtgagccgggacggcggggatgtagtcatcatgcggaggctggaccgggag
accgaacctctggtggagatcaccgtcagggtgcaggacaagagaggtttggagtggtac
ctggttagagtggagctgactgtgactgatgtaaacgacaacatcccggaatggagcatg
gttcctgctccctaccttgctgtggtttccccagatgcgactgcaggatcactggtttac
aaactcattgctcaggatggagacgaaggtcttaatggtgaagtggagtacttcctatct
gatggtggcgacggtcgatttgaagtggacaggaagagtggccagatacggacgacgggg
cttcctctgcagcgtgacagagagtacctgctgacggtggtggcagccgatgggctgggc
agccgcagtgcccctgccatcatatctgtggtggctggagcccggccaccgcagtttact
aatgcctccttcaccatcgctataccggaaaacacgccggaaggacagccgtttctggtg
acacctgctgtgtccttccaaaagaaaccaatcagctacagcctcctcatcaatcccagc
agtctgttctccatctcggcagacacgggcgaaatcagcctgacccgcaccatcgattac
gagagtgaccaacatcgttacttgcttctggtgcgggccagcgagggccaggacagcatg
agcagtgcagcagaggtgcgagttgttattgttgatgagaacgactgcgttccagaattc
ctgcagtcgatttacagcaaggacggcgttccggagatggttacaacggcaacctccttg
ttgcaggtgtccgccagcgactgcgactccggaccgaatgccgacctgacctattacacc
ctgagtccagatttcatcatttctcctcacgggaccatcttcccagcgggacctctagac
tacgagagacccaatcacctgtatgagtttgtcgtcatggcaattgacaagggagacgtc
cctcggacgggaacgacgacggtacgaattaggatggccaacgtgaacgacgaggcaccc
gagttttcccaacatatataccggacgtttgtgtcagaagatgcggggcccaacacactt
gttgccacggtgctggcgaaggaccctgatggtgatgggatcacttacaaaatcactaca
ggaaatgatgaaggcaattttgtcattgacagccaaaaaggtttgatccggctgcgctcc
agcccaccgcctcgcctgcagggcgtggagtacgtcctcaacgtcacggccacagacgac
aacgcctcgggcgggccgcaggcgctggcctccacggcgcaggtcatagtgggagtggac
gacgtgaacaacaacaagcccgtctttgaacagtgtcagcagtacagagagagcacatcg
gttctggagaaccagccggcggggtctttcgttctgcaggttcacgctgtggatgcagac
gaaggctccaatggcagggtcacgtatggcttcatgcacaaagactctacagttcctgca
ttcagtatccaccctgatactggcgtgatcgtgactgccaggaaatttgatcgtgagcgt
cagcgggagtatgcggtgacagtgactgccactgaccaggcagccgatcctctgatcggc
atctgtcaactcaacattctcatcctggaccagaatgacaacagcccgaagtttgagaac
ctccgatatgagtacttccttcgtgaggatacaatgatcggaactagtttcctgcgggtg
gcagcccatgacgatgactttggcagcaatgcagccgtcacgtacaccatgtctggtgag
ctgccggagtacctcagggtcaacccgctgacaggctgggtgtacgtcaaccagcccatc
tcccagaggacatacatcaccagggagatcgtagcaacagacggaggaaacaagagcagt
tcggtggaactggctgtcaccatcaccaatgtgaagaaccagcctccacagtgggaaaaa
gacacttacagtgtggtgattccaacacagttactttcagatacccccataaagaccatc
aaagccacatcccctcttggtgatccgagggtaacgtacaacttggaggatggaatggtc
ccagagaccaacatgccggtccgcttctacttgactcccaatcgagaagacggttcagcc
tccatcctggtggcggagcctttggactatgagaccaccaggaactttattctgcgggtt
cgcgcccagaatgtggcagctgtaccattagctgccttcaccacggtctatgtcaatgtc
acggatgttaatgacaacgttccattcttcacttcctccatctatgaggcctcagtcact
gaaggagcagaatcaggaattttgattttccaggtatcagccaatgatctggatctgggc
cttaatggcaagatttcctactcgttgctggaggaccgcagtggggaccacaagtatttc
cgcatcgactcggaggttggcttcatctactctcaggctgtgtttgatagagagaccaaa
agctcttatctgttggaggttcagtctgtggatggctgggagtcttcgcgaccaggaaaa
catggacaacccaactctgacacagcatatgttcgcgttttcatcagcgacgtgaacgat
aacaagcccgtgtttgcacaggcgtcttatgaagttgatgtggatgaggacgctgacgtg
ggctttgctattctcacagttagtgccaatgatggggacgaaggtgggaatgcgaagctg
cgttaccagatcacatcaggaaacacaggaggcgtgtttgacgtggagccagaggtggga
accatctttatcgctcagcctctggactatgaacagaacaaaagatacaagctgcatgtc
ctggcttcggacgggaagtgggaggattacacggcggtgacggtgaacgtggtgaacaag
aacgacgagtcgcctgtgttcacagtgaacgagtactacggcagcgtgaccgaggagctg
gacggctcgcctgtctttgtcctgcaggtaacagcgtctgaccctgataaggatgccgac
caggaggccctgcggtactcccttcatggccagggtgctgagagcgagttcataatcgat
gaggtcactggcaagatctacgctcagaggacgctggaccgcgaggaacgcgccgtctgg
cgcttcgtcgtcctggcaacagatgagggcggggaaggcctgacgggctttacggacgtt
atcatcaacgtgtgggacatcaacgacaatgcccccatattcccctgcgccctcagttgc
cacggagatgtagccgagaactctgctatcgggacgtccgtcatggagatgactgccact
gacctggacgattcggcggtgggacagaacgccgtgctctcctacaggatcgtgggcatc
ttagacgccacaaatgccaaactgggcggagtgcccaccatctcagaaatgttcagcatc
aatcccaccacgggaaccatcaccgtgggcttgggcggtctggacagggagcaggtggag
tcctacctcctcctcgtcgaggccagagacggaggagggatgacgggaactggaaccgca
accattcagattgcagacgtcaacgaccacgctccaaggttcatcgatcattcctgtcag
gcaaggatctctgaaaactcagagcccaacacacaggttctggagctggctgcagaagac
agagacactggagaaaacgctcagctgaccttcagcattgtggccggagatcaagagcag
aagttctacatggtcagtcacaagcaggagcagcgtggagtcctgaggctgaagaagcgc
ttggactatgaacgacacagtgaacagaagttcaacctcacgctgaaggtggaggatctg
gacttctccagctttctgcactgcgtggtcgaggtggaggactataatgatcacacgcct
gtcttcattccacacttcctgtcccttgcgccgctaccagaggacgtcagcgtgggaacc
agcgtggcccgtctggtggccagtgactcggactcgggccaaaaccgcgaaatcacctac
agcctgtcggaagactcagaccctgagggcctgttcaccatcgaccagtccggcctactc
tcggtggcccggccgctggaccgagagaaaacagctcagcatcacttggttgtcatagca
acagatcacgggatgcctgctttgacaggcagcgccacagttcagctgcccctgttggat
gttaacgataacggaccagagtttgaggctgcctactctcctgtcgtctttgagaatgtg
gctggtccacaggtagtgaggttgaaccaaacctcggtcctcctccgagccgtggaccgg
gactctcccgagaacgggccgccctttcacttcaccgtcccaccggagtatcgctacggc
aacgacttctacctccaggataacctgaacggcacgtccactctgacggccctcaggacg
ttcgaccgcgagcgccagaaggagtttctcctgcccattgtcatgagcgacagtggccgc
ccggccaaaacggtgaccagcaccctgactgtgaccattggtgaccagaatgatcacgct
cacgtagcgggagagaaacagatatccatcaacagccacagaggccgcatgccaactaca
gtccttggaaaggtctatgctcctgaccctgatgactgggataataagacctacgtcttt
gagggacacatgccaagttacttcatcctgaacaagcgtaccgggttccttatcatcaag
gagaacaccctacccggcacctaccagttccaggtccgtgtgtctgatggagtttggccc
gacgccgtctccacagtaaccgtatacgtgagggagctgcgagacgaagccatctacaac
tctgcgtcccttcgcctcgcagacatcactgccaaggagttcatggagctccgagggaag
cagcgcagccgctacgagctgctggtggacttcctgtcggagatgctctccgtcccaccg
ggggaagttaacatcttcagcctcatggacgtgaaggagcgaatgctggacgtccgcttt
gctgtgagcgccggcccctccttcctgcagccggagaaaatgcacggctacctagccgcc
cacaaacaaaagctccagtccgtcctgcaggtcagcgtgttccaggtccgggtggacgag
tgtcccggttcagagtgcgccggctccggcggctgcaccagcgtgctggaggtgcgggac
gcgcccacggtggtggactgcggcaccatgagcctggtttccgtcatggtggagtccaag
gccgtgtgctcctgccctggacgggagcagtcccatcagccctgcgcctcgtatcccaga
aacccctgcttcaacggagggctgtgcgtggacacgcagcacggctacaggtgccagtgc
cctgctcagttcgagggacctgaatgccagcagaacaagcacagtttccatggcaatggc
tatgcttggtttcctcctatgatgccttgttttgagagccatgtgtcgctggagtttatc
acagacgtggctgatggactgctgttgtacagcggcccactggcacagctgcaagcctgg
gaccacgaggacttcatggccatagagcttatagacgggaccccaaccttgaaaatcaac
catggctctggcacgcttgtgttacagctgcccggaaacatcaacgtggcagacaggcgc
tggcatcggctggacgtccgtagcaacagcaaggaagtacgtttcactctggaccgatgt
tcaggagcagcagtgatggagatggagggtctgggcagctggttgaccactgaggaccac
tcctcctgtgaagtgatgggtgttacacccaacactgacagacacctaaacaccagtcaa
gttctccagctcggaggtgtgaacgaggacattccctacatctaccctcagcttcagcac
aaacacttcaccggctgcatccgcaacctcattgtggacagcaagctgtatgatctgggc
tcccctgccgactggcagtccagctccccaggctgcctcaccactgatagcagctgtgtc
aacatgggctttccagcctgcggccatcgtggccgttgtcatggggagtggggctccttc
agctgccagtgtgtggccggatacactggacagcagtgtgaagaagtggccccggagtat
tccttcgacggccacagtcatctgcactaccagctggcgtccgcactgccgcccagaaga
acgtggatccaagtcctggttcgaacccggaaacacagcagcagcatcgtcagcctggtg
tccagggatcagagtgaatacctgcgactggaggtatttcagggccttctttgcactttc
tacaacctcggcgacggagactacaacctgaccctacccagctatcgccttgacaacggc
gagtggcacgaggtctccttggacagacacgacaacgagatgacactgcggctggatggc
ggcggagggaagcgggaggtgacgggatcgcagagcagaagccgagaaatcgtcatcgac
ccgaccgccgtgatgctggggaactccttcccctcggaaagcaacaggagctttcaaggc
tgcatcagggatctacgcctcaacggccgttacatgccactggacagccagccacttgac
ggggtttcccaggtcagcgtgcaagggctctctgttggatgttcatcagactcctgcaaa
aagtaccactgtaaagccccgtttacctgcgtggacttgtggagagtgcacgaatgcagg
tgtcctcctggtcacatgatccgtgtgaacggcaccaaaaagtcctgtgtgtacacgcta
tgcgctacgcggccttgtcaccggggaacctgtgtggcccagtcaccctctaaattcacc
tgccactgtccggagggctacagggggcgccactgtgagacgacattggctgtttatagg
gaggacgtgggcctgagcttcagctcgctctttgccatctgtatctgcttcatggcgttg
ctagtgctgctgctgggaattttcctctacacccgctggcggagctacaaaggtctgaag
gagggcgtgtaccacgtgtcggcgcaccacgacggctgggaggacatccgggagaacgtg
ctcaactacgacgaggagggaggcggtgaggaggatcagaacgcctacgacatggcggag
ctgcagaagtcccttcagccaagccccgcccagtcggtccagtactgccgctccagagcg
ctgcaccacccgccgcccacccaccacctacaccaccacctgctccaccaggctccgccc
gtcccggcctccgccccgccgctggaccccctaagccggacgtccagctccaccaccctg
cctccctcggccgcgtccacgtcctccacgtccaccaccgccgccagcctccgcagggac
gtgccccccgcccggccccccgcccagggccaggcgcgcccctcccagctggcgcggcgc
tccctctccttctccagccaggacctggcccgctacctgtgtgagatcatccgtgatgcc
gaccagcacccggacacggggcccttcgactccctgcaggtgttctccaccgagggcggg
gggtcgcccgccggctccctcagctccttcagttcggcagggctggacggggggagcaca
ggggaggggagtggggaggctcggcgggaggagacgctgggggagtggggccctcgcttt
gagaaactgagagctctgtatgaacgagccgaggccagcgacctgtga
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integrated database retrieval system
