Gambusia affinis (western mosquitofish): 122820881
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Entry
122820881 CDS
T07758
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122820881 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122820881 (cnga1b)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122820881 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
DUF3043
PFF1_TM
NPR3
Sec62
CDC45
Tim54
Piezo_TM1-24
DDHD
CLN3
DUF2126
ANKRD13_C
RR_TM4-6
CIS_TMP
AAA_11
Serinc
DUF2828
MDM10
Motif
Other DBs
NCBI-GeneID:
122820881
NCBI-ProteinID:
XP_043954470
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All DBs
Position
LG18:25535451..25544797
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AA seq
748 aa
AA seq
DB search
MVREWRGNSEGTARERRGNGEGTSTLFSFHMLQFSLRSRNVFMNCSSASRRGNGCNPKCN
RSQRRRSTGSRYRTTAHISKTNRITMAKVAPLIPGPSSGLNPPSIVLQDMEEGAEPGDIT
QGLRRSQRGGAGALFNINNSNNNEEEEEEEKKRKKKEKKEKKEKREKEKQEKKERKEQKQ
KEKEEKEKEKQKEKEKLEKEKKAKEEAAKEITVIDPAGNTYYNWLFIVTIPVMYNWTLII
ARACFEELQTDYLIMWFIVDFICDVIYIMDMVFRTRTGYLEQGLLVKDEQKLRERYMKTF
QFKLDLVSMIPTDILYLILGITYPEIRLNKLLRFNRMMEFFQRTETRTNYPNALRISNLV
MYILIIIHWNACLYYSFSKAIGFGSDRFVYPDPTDPEFGRLVRKYAYSMYWSTLTLTTIG
ETPPPVENSEYFFVVTDFLVGVLIFATIVGNVGSMITNMNAARADFQARIDAIKQYMSFR
KVTKDLEKRVIKWFDFLWTNKKAVDERDVLKYLPDKLRAEIAINVHLDTLKKVRIFADCE
AGLLVELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGIKQFVVLSEGSYF
GEISILAIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKALLEEKGRQILM
KDGLLDLEVAAQGPDPKEMEEKVDKMTSNLDMLQTQYARLLAEHDATHSKLKHRVTRLEK
KLAPPQEDAPGDAPPPPTPETTKEEEKK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggaatggcgagggaacagtgagggaacggcgagggaacggcgagggaacggt
gagggaacctccaccctcttctccttccacatgctccagttctccttgcggtccaggaac
gtcttcatgaactgcagctctgcatcaaggaggggaaacggctgcaacccgaaatgcaac
agatcacagagacgcaggtccaccgggtccagatacagaaccacggctcacatcagcaag
accaaccgtatcaccatggcgaaggtagcgccgctaatccctggcccttcatctgggtta
aaccctcccagcatcgtgctgcaggacatggaggagggggcggagccaggtgacatcaca
caggggctcagaagatcccaaagaggcggagcaggagctctgttcaacatcaacaacagc
aacaacaacgaggaagaggaggaggaggagaagaagaggaaaaagaaagagaagaaagag
aaaaaggagaaaagagaaaaggaaaagcaggagaaaaaggaaaggaaggagcagaaacag
aaggagaaggaagaaaaagagaaggagaaacagaaagagaaggagaagctggagaaagag
aagaaggccaaagaggaggcggcgaaagagatcacagtgatcgatccagctgggaacacg
tactacaactggctcttcatcgtcaccatcccagtcatgtacaactggaccctgatcata
gccagggcttgttttgaggagcttcagactgactacctgatcatgtggttcattgtggac
tttatctgtgacgtcatttatatcatggacatggttttcagaaccagaacaggttacctg
gagcagggtttactggtgaaagatgagcagaaactacgtgaacgttacatgaaaactttc
cagttcaaactggatttggtctccatgattcccaccgacatcctgtacctgattcttggt
atcacctaccctgagatccgcctcaacaagcttctaagattcaacaggatgatggagttc
ttccagcgcactgagaccagaaccaattaccccaatgctctacgtatctccaaccttgtc
atgtatattctcatcatcatccactggaatgcctgcctctactattccttctccaaagcc
atcggttttggttctgacaggttcgtgtatcctgacccgacagatcctgagtttggccgt
ctggtgaggaagtacgcttacagtatgtactggtccacgctaacgctcaccaccattgga
gaaacgccgccccctgtggagaactcggagtacttcttcgttgtgacggacttcctggtg
ggtgtgctgatttttgccaccattgtcggtaacgttggctcgatgatcactaacatgaat
gctgccagagccgacttccaggcccggatcgacgccatcaagcagtacatgagtttccga
aaggtaactaaagacctggaaaagcgagtgatcaagtggtttgacttcctgtggaccaat
aagaaggctgtggatgagagagatgttctgaagtaccttcctgacaagctaagggctgag
atcgccatcaacgtacatctggacaccctgaagaaggtccggatctttgcggactgcgag
gctggtctgttggtggagctggtgctgaagctgcagccgcaggtcttcagtccaggagat
tacatctgcaagaagggagacatcggcagggagatgtacatcatcaaggaagggaaactg
gctgtggttgctgatgatggcatcaaacagtttgttgttctaagtgaaggaagttacttt
ggggagatcagtatcctggctatcaaaggtagtaaggcaggaaacaggaggacagctaac
atcaggagcatcgggtactccgacctcttctgtctttccaaagacgacctgatggaggcg
ctaacagagtatcctgatgctaaagctctgctggaggagaagggacgacagattctgatg
aaggatggcctgctggatctggaggtggcagcccagggcccagaccccaaagagatggag
gagaaggtggacaagatgacgagcaacctggacatgctgcagacccagtacgcccggctg
ctggcagaacacgatgcgactcacagcaaactcaaacacagagtcacccgactggagaag
aagctggcgccgccacaggaggatgcacctggtgatgctccgccccctcccacacctgag
accaccaaagaagaagagaagaaataa
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