Gambusia affinis (western mosquitofish): 122821242
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Entry
122821242 CDS
T07758
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122821242 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122821242 (hdac5)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122821242 (hdac5)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122821242 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
122821242
NCBI-ProteinID:
XP_043954914
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All DBs
Position
LG19:406507..483179
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AA seq
1138 aa
AA seq
DB search
MLLHPTVSGLCTMLQTIYETESCFSSASTDSHHQPLELLSDSRGSGADMTAAVLEVKSSL
PSGMQSPVEATCEQRGGGGEGVGGIPEEGPGGGGGPVDLRTEPRLGSVSGGGAVDTALRE
QQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQELE
HKRKLEQQRHEEQEKQRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGPGGL
NHSFSPKCWGGQHTSLEQSSPPQSNAPGTPPSYKLPPLLGNYEGKDDFPLRKTVSEPNLK
VRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEISVSSLCNSAPGSGPSSPNSSNTAI
ANGNTGSVPNIQTELRSLHQTLGADGTLSPLTLYTSPSLPNISLGLPANTHITPPQKLST
QQEAERQSIQSLRGGGALTGKFLSTSSLPAGAAHDVETPPPGSHSAHSSLLQHVLLLEQA
RQQTAMLVPMYNQSPLVTAERGVATGMRPVNKLPRHRPLARTQSAPLPQSPQALQQLVVQ
QQHQHFLEKHYKMLSKGGDLPRPPPTHPEETEEELTETNDMQEDEGTTPNSSLQKEGSED
SSHSSERLASHLKGEEESRVIQVKGESTESELDEDEEDDDVIQLRESEEEERGSYIQQSL
QHLSVFSSSLSHRPLGRAKSSPATAVNPIKHLFTTGLVYDSLMLKHQCVCGNAHIHPEHA
GRVQSIWSRLQETGLLSRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLL
GPISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVR
PPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYNDPNVL
YISLHRYDDGNFFPGSGAPEEVGSGAGVGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMPI
AQQFSPDVVLVSAGFDAVEGHQSPLGGYNVSAQCFGKLTQLLMGLAGGRIVMALEGGHDL
TAICDASEACVSALLGDLCDSGFQWPQENPCPKACASLERVIDIQSKHWPCLQSASQTSG
PSLLAGSPVAPGQSERDEAETLSAMASLSVDVDQPGSVPENRDSNRSAEEPMEEEPVL
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacatcccaccgtgtcaggattgtgcaccatgctgcagaccatctacgagact
gagtcgtgtttttcctctgccagcacagacagccaccaccagcctctggagctcctgagt
gacagcaggggctccggtgctgacatgaccgctgctgtcttggaggtgaagagcagcctc
ccatcaggcatgcagagtccagttgaagcaacatgtgagcagagaggaggtggtggtgaa
ggggttggtggtattcctgaagaaggcccaggtggaggcggaggcccagtggacttgagg
acggagcccaggttgggctctgtgtctggagggggagcagtggatacagccctgagagag
cagcagcttcagcaggaacttgtgcttctcaaacagcaacaggaactccagaagcagctg
ctatttgcagagtttcagaagaaacatgaagtgttaacaaggcagcacgaagtccagctg
caagagcacttaaagcaacaacaggagctgctggcagcaaagcggcagcaggagttggag
cataagagaaaactggagcaacaaagacatgaagagcaggagaaacagagactggagcaa
caactgttgctgctgagaaacaaagagaaagggaaagagagtgccattgccagcacagag
gtgaagctgaagcttcaggagtttcttctcagtaagaaagaacctggtccaggaggactc
aaccattccttctccccaaagtgctggggaggccagcacacgtctctagagcaaagctcc
ccccctcagagtaatgcccccggaacccctccctcctacaaactccccccccttctcgga
aactacgagggcaaagatgacttcccacttcggaagacagtttcagagccgaacctgaag
gttcgatccagactcaagcagaaagtggcagagaggcgcagctcaccattgttgcgcagg
aaggatggaactgtcatcagcaccttcaagaaaagggctgttgagatatcagtctcctcc
ctttgtaacagtgctccaggctcaggtcccagcagccccaacagttccaatacggccatt
gccaacggcaacacgggctcagtccccaacatacaaaccgagctgagatctctccatcag
acactgggggctgatgggacattgagtcctcttaccctctacacatcaccctccctgccc
aatatctccctaggcctccctgccaacacacacatcacaccaccccagaaactgtccacc
cagcaggaagcagagcgtcagtccatccagtccctacgagggggaggagctctaactggg
aagtttctctccacttcctccctaccagcaggtgcagcacatgatgtggagactccgccc
cccggctcccattcagcccattcctcgttgctgcaacacgtcctgttgcttgagcaggcc
cgacaacagaccgctatgttagtgcccatgtacaatcagtcaccgctggtaactgcagag
agaggtgtagccactggaatgcggcccgtcaacaagctgccccgccaccgaccgttggct
cgcacacagagcgccccgttaccccagtcgccccaggcgctgcagcagctggtggtccaa
cagcagcaccagcacttcctggagaagcactacaagatgctatcgaaggggggagacctc
cctagaccaccacccactcaccctgaggagacggaggaagagctaacagagaccaatgac
atgcaggaggatgaaggcacgactcctaacagtagcctgcagaaagagggatcagaagac
agcagccactcatctgaacgactggccagccacctgaagggggaggaggaatccagggtc
atccaggtcaaaggcgagagcacagagagtgagctagatgaagatgaagaggatgatgat
gtcattcagctaagggagagcgaggaagaggaaaggggcagctacatacagcagtccttg
cagcatctgagcgtgttttcatcctcgctgtcccacagacctctgggaagagccaagtca
tcccctgcaactgctgtcaaccccatcaaacacctcttcaccaccgggttggtgtatgac
agcctgatgctgaaacatcaatgtgtgtgtggcaatgctcacattcacccagagcatgct
gggagagtccaaagcatctggtccagactgcaggaaacaggcttactgagccgctgtgag
aggattcgtgggagaaaagcatctctagatgaaatccagtcggtccattcagagttccac
accctgctgtatggaaccagcccgctcaatcggcacaaactggaccacaagaagcttctg
ggtcctatcagtcagaagatgtatgctgttctgccctgtggaggaataggggtggacagt
gacactgtgtggaatgaaatgcactcatcagcagcagttcgcatggcagtgggctcagtt
attgagctggcctttaaggtggctgcaggggagctgaagaacggctttgcagttgtgcgt
ccacctggtcaccatgcagaggaatccacagccatgggcttttgcttcttcaactcagta
gccatcaccgccaagctgctgcaacagaagcttggagtagggaagatcctcattgtggac
tgggacattcaccatggcaatggcacccagcaagccttctacaatgatcccaatgtgctc
tacatatctctgcatcggtatgatgatggaaacttctttcctggcagtggagcaccagag
gaagtgggctcaggtgcaggagttggctttaatgtaaatatagcatggactggaggagta
gagcctcctatgggtgatgtggaatatctcactgctttcaggagtgtggtaatgccaatt
gcccagcagttcagtccagatgtggtcctggtgtctgcaggctttgatgcagtggaaggt
catcagtctcctctgggtggctacaatgtttctgcacaatgttttggtaagctaacacag
ctgctgatgggactggcaggtgggcggattgtaatggcgctcgagggtggccatgaccta
actgctatctgtgacgcatcagaggcctgcgtctctgccctcctgggagatctgtgtgac
tctgggtttcagtggcctcaggagaatccatgtccaaaggcctgcgcctccctggagaga
gtcatagacatccagagtaagcattggccttgtctccagagtgcgtctcagaccagtggc
ccctcgctcctggcagggtcacctgtggccccaggccagtctgagagggacgaagctgaa
acgctcagcgccatggcctcactaagtgttgatgtggaccagccaggctctgttcctgaa
aacagagactctaacaggtctgcagaggagccaatggaggaagagcctgtgttgtaa
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integrated database retrieval system
