Gambusia affinis (western mosquitofish): 122821268
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Entry
122821268 CDS
T07758
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaf02000
]
122821268
03037 Cilium and associated proteins [BR:
gaf03037
]
122821268
Transporters [BR:
gaf02000
]
Other transporters
Pores ion channels [TC:
1
]
122821268
Cilium and associated proteins [BR:
gaf03037
]
Other cilia and associated proteins
Stereociliary proteins
122821268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
122821268
NCBI-ProteinID:
XP_043954978
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All DBs
Position
LG02:complement(33145288..33218542)
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AA seq
1157 aa
AA seq
DB search
MSSASEPVVGSSRSLLAAKRHRTVRKNSRRIYSAYRDHQQGSSDEEGGDDKEVDSNDPEE
MFQNIQYQKEIIANIRSRPWPMRRKLKVLKQAREIVLKYEGQLTRTRGYQTAGADLLKKL
YRVLYNIVVTFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGSFVVLPELL
AGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGSVRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAECKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAPHVSSSNWTNTSSTISSLSAQVSRISVSEHHNSTMATISTAINFI
HNRSSLITAYNQTIPFEKNARSQQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFIRGL
VVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKLIGL
MYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSEHCGPFS
GQEKIYDIISDTVASDFPLWFSKVMSYVTSPVVVLPAVLLLFMLIYYLQAIARSLKFTNN
QLRIQLQTERTEDKKKVFQMAAARLQVPEASADKNADQQESDIPSQEASIHTSSPQQNGS
ITNIQSPINRSNSIRTITQSASGADLNEGHVSGSVRSPAVIVLPKHPVEHFPNSRPRHFI
GGRSGSCRSKSCHHMAYNPPSGLSNAIHTDPLYRKTIRSLHPVEAAGIIAAQNYGGRRGP
TTRYVIVNEHRPRKKLLCSTTRIPRHYLMEEPTEILELYPRNIKHYTPRTIHQQHPPRSH
TSQQLRKEEEETGKDRKRSSLGKSLRPCSLPDHHQQAHFYIGERLDSCRESQRARYEMQE
DDEEEAGKEGIDWGDFNLPSPSRTSVKEKESFHTQRHPVHSPRRQYQCPTRTRHMGSQLK
PKLRGQLETHLTESDSASIASSSDQQNSSTDQYIQVIHSKERHLGSDVRQEKMSKKKTKT
NFDLHYTESNDLICSNV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcatctgaacctgtggttggaagcagtagatccttgcttgctgccaaaaga
catcggactgtacggaagaactcaagaaggatttattctgcttaccgagaccaccagcag
ggctcatcggatgaagaaggtggagatgataaggaagtggacagcaatgaccctgaagaa
atgttccagaacattcagtaccaaaaagagatcattgccaacattcgctccagaccctgg
ccaatgagacgcaagctcaaagttttaaagcaggctcgagagattgtcctaaagtatgaa
ggccagctgacgagaacaagaggttatcagaccgccggagctgatctgctgaaaaaactt
taccgtgtgctttacaacattgttgttacattcattccgtgggaagtgaggatcaaaaaa
attgaaagtcactttggatcaggcgtagcctcctattttatctttcttcgctggctgttt
gggataaacatcgtcctcaccatcatgacaggatcttttgtggtgctaccagagctgttg
gctggagctccatttggaacaacaagaagtaaaactatccccaaagagcatcttgcatca
gcccaagacttggacaccatctggtctcttgggggttacctgcagtactctgttttattc
tatggttattatggcagcgtgaggaagattggcagtgctggctaccggctgccacttgca
tacttccttgttgggatggctgtttttgcctacagtttcatcatcctgttacgcaaaatg
gcaaagaactctcgtctgagtctggccagtgcttctgatgaaaacttcacattctgttgg
agagttttctgtgcctgggattacctgattggtaatccggaagctgcagagtgcaaaggg
gctgcaattgttaacaacatcagggaagcaattgttgaagagcaagaaaagaagaaggat
acaagcctggcagttctcatcagtctgcgtattttagccaatatcttggttttgctgtca
ctagctgggagcatctacatcatctattttgttgtagaccgatcccagaaactggagcag
gaaaagccagagctgacgttgtgggagaagaatgaggtgagtgtggtggtctcactcatc
actatgatcgcaccttctgcctttgagctggttgcccagctggagatgtatcacccaaga
acctccctgagattccagttggccagagtccttgttctatatctgggaaacctctacagc
ctcattattgctctcttggataaagtcaacagtatgagttctgctcctcatgtgagttca
agtaactggactaacaccagctccaccatatccagtctctctgcccaagtatcaaggatc
tctgtgtctgagcatcacaacagtaccatggcaaccatcagcacagcaatcaatttcatc
cacaacaggagcagcttgattactgcatacaaccagacaattccttttgagaaaaatgca
cgatctcaacaggaccagtgctgggagacctatgttggacaggagatgttgaagctttct
attattgacatgatcttcacagtggccagcatcttgctcattgactttatcaggggtctg
gtggttcggtatctgagtgactgctgctgctgggacttagaaagcaaatttcctgaatat
ggagaatttaaaatagctgaaaatgtcctacacttgatctacaaccaaggaatgatctgg
atgggagcctttttctctccatgccttcctgcctttaatgtgttgaaactgattggtcta
atgtatctaaggagctgggctgtcctcacttgcaatgttcctcatcagcaggttttccga
gcttccagatcaaataatttctacttggctatgctacttttcatgctcttcctgtgtatg
ctccccaccatctttgccattgtgcgatatagaccatcagaacactgtggaccattcagt
ggccaggagaagatttatgacatcatctcagacacagtggcatcagacttcccactttgg
ttcagtaaagtgatgagttatgtcaccagccctgttgtggtgctgccagcagtgctactg
ctatttatgctgatatattatcttcaagctattgccagatccctaaaatttactaacaac
caactgaggattcagctccagactgagcggacagaggacaagaaaaaagtgtttcagatg
gctgcagcaaggctgcaagtcccagaggcctcagctgacaaaaacgcagatcagcaggaa
agtgacatcccaagccaggaagcttccatacacacctcatctccccagcaaaatggcagc
attacaaacattcagtctcctattaatcgtagtaacagcatccggaccatcacccaatca
gcttctggagctgacctgaatgaaggacatgtgtctggatctgtcagaagtccagctgtg
atcgtactacccaaacacccggtggaacactttccgaacagtagacctcgacatttcatt
ggtggccgaagtggttcctgcagatccaagtcttgccaccacatggcatataatccacca
tctggcctttctaatgcaatccatactgaccccttgtacaggaaaaccattcgttctcta
caccctgttgaggctgctggaatcattgctgcacaaaattatggggggcgccgtggtccc
actacccgctatgtgattgtcaatgagcacaggccccgtaagaagctactgtgctcaacc
acacgaatcccaaggcactatctcatggaggagcccacagagatcctagagctatacccg
cgcaacataaaacactacacacctcgcaccattcaccaacaacatcccccccgctcccac
acatcacagcaactcaggaaagaggaggaagaaactggaaaagacaggaaaaggtcttct
ttaggcaaaagccttcgaccttgttcattgcctgaccaccaccaacaagcgcacttctat
attggtgaaaggttagatagttgtagagaaagtcagagagcaaggtatgagatgcaagaa
gatgatgaagaggaagctggtaaagaaggaattgactggggagatttcaacttaccgtct
ccatctcggaccagtgtaaaagaaaaagaatcttttcacacacaaaggcatcctgtccat
tctccaaggagacagtaccagtgccccaccagaaccagacacatggggtctcaattaaag
cccaagttaaggggtcagcttgaaactcatctgactgaatctgactcagcctccatagcc
tccagcagtgaccaacaaaacagcagcactgatcaatatattcaggtcatccacagcaaa
gagcgccatcttggatctgatgtcaggcaagaaaagatgtccaaaaagaaaaccaagaca
aactttgatctacactacacagaatcaaatgacttgatctgttccaatgtgtaa
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integrated database retrieval system
