Gambusia affinis (western mosquitofish): 122821405
Help
Entry
122821405 CDS
T07758
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03420
Nucleotide excision repair
gaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122821405 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
122821405 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gaf03051
]
122821405 (rad23aa)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122821405 (rad23aa)
Proteasome [BR:
gaf03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122821405 (rad23aa)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122821405 (rad23aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
122821405
NCBI-ProteinID:
XP_043955247
LinkDB
All DBs
Position
LG19:3403839..3415611
Genome browser
AA seq
367 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKPAAPASPPVSEAPKPPVQDSGSTPAPAPATNPAPAPALAPAP
AAVPISSEEAKPEPNPAATEPQQPASSSGVSQGLDASSTLVTGAEYEAMLTEIMSMGYER
ERVVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPTSGPTEPPSLAEGENPLAFL
RTQPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGDAP
EVGEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLL
NQGLEDD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctgaaaacactgcagcagcagactattcagattgagatagaccccgaa
caaacggtgaaggccttgaaggagaagatcgaggctgaacggggaaaggacaacttcccc
gtttctgggcagaagctgatttatgccgggaaaatcttgcaagatgacacgcctattaaa
gactacaagatcgacgagaagaattttgtcgtagtgatggtgtccaaggctaaacctgca
gctccagcctcaccgccagtctcagaagcccccaagccgcctgtacaagactcaggctcc
acccccgcccccgccccggctacaaacccggctccggccccggctctggccccggccccc
gcagctgtccccatttcttcagaggaggccaaaccggagcccaacccggcagccacagaa
ccccagcagccagccagctccagtggcgtcagtcagggcctggacgcctcctcaacgctc
gtgactggagccgaatacgaggccatgctgacagagatcatgtctatgggctacgagagg
gagagagtggtagctgcactacgggccagcttcaacaaccctcacagagcggtggagtac
ctcctcactggtatccccagcagcccggttcaggagagcaacccaccggcccaggccccc
acatctggccccacggagcctccgtctctagcagaaggtgagaacccactagcattcctg
agaacccagccgcagttcctgcacatgaggcaggccatccagcagaacccggctctgctc
ccagctctcctgcagcaactgggccgagagaacccacaacttctacagcaaatcagccaa
catcaggagctgttcatccagatgctgaacgagccggtgggagaaggaggcgacgcccca
gaggtcggcgagatgggggcggcgggcgaagagggcgcgcccgtcaactacatccaggtc
acaccgcaggagaaggaagccatcgaaaggttaaaagctctgggtttccccgaggctctg
gtcatccaggcctacttcgcctgcgagaagaacgagaacctggcggccaactttctcctc
aaccagggactggaagacgactga
DBGET
integrated database retrieval system
