Gambusia affinis (western mosquitofish): 122821816
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Entry
122821816 CDS
T07758
Symbol
coro1a
Name
(RefSeq) coronin-1A isoform X1
KO
K13882
coronin-1A
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122821816 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122821816 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122821816 (coro1a)
04147 Exosome [BR:
gaf04147
]
122821816 (coro1a)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Coronins
122821816 (coro1a)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122821816 (coro1a)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122821816 (coro1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
WDCP
Beta-prop_EML
Beta-prop_WDR75_1st
Trimer_CC
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
WD40_RFWD3
NBCH_WD40
Beta-prop_HPS5
DUF6779
CC4_CEP85
DUF7310
TolA_bind_tri
Beta-prop_NUP159_NUP214
DivIC
Motif
Other DBs
NCBI-GeneID:
122821816
NCBI-ProteinID:
XP_043955981
LinkDB
All DBs
Position
LG19:20973393..20982552
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AA seq
460 aa
AA seq
DB search
MEFTMSRKVVRTSKFRHVFGQAVKADQCYDDIRISTMTWDSNFCSVNPKFVSMIVDASGG
GAFMVLPLNKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPDGGL
TSPLTEPVVKLEGHCKRVGILNWHPTAHNVLLSAGSDNVIILWNVARGEEVVRIDSVHPD
LIYSACWNRDGSRILTSCKDKKLRVLDPRKGTVLSEKDKPHEGSRPVRAVFVSDGKILST
GFSRMSERQVALWDPNNFGEPLTLQELDTSSGVLLPFFDPDTGIIYLCGKGDSSIRYFEV
TDEAPYVHYLSMFSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSD
LFQEDLYPDTVGPDPSVEADEWFDGKEAPPVLISLKEGFVATTKSKEFKVHKSLLKTTTA
SAGSQSEGSGEVQSLRKEVKDLKAALEELTKRVKELETKN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaccatgtccaggaaggttgtgagaaccagcaagttccgtcacgtctttggc
caggccgtgaaggccgaccagtgttacgatgacatccgcatctccaccatgacctgggac
agcaacttctgctccgtcaaccccaagtttgtgtccatgatagtggacgccagcggcggc
ggggccttcatggtgctgcccctcaacaagactggacgtatcgacatgtcctaccccacc
gtctgtggccacacaggtccggttctggacatcgagttctgccctcacaatgacaacatc
attgccagtggatctgaggactgcagcgtcatgatttgggagatcccagacggcgggctc
acctcgccgctcacagagccggtcgtgaagctggaaggtcactgcaagcgtgtcggcatc
ctgaactggcaccccaccgcccacaatgtgctgctgagcgcaggttctgataacgtgata
atcctgtggaacgtggctcggggggaggaggtggtgaggatcgacagcgttcatcccgac
ctcatctacagcgcctgctggaacagggacggctcccggatcctcacctcctgcaaagac
aagaagctgagagtgctggacccccgcaaaggcaccgtcctctctgagaaggataaacct
cacgaaggctccaggcctgtgagagccgtgttcgtgtctgatgggaagatcctgagcacc
ggcttcagtcgcatgagtgaacggcaggtggcgctatgggatccgaacaactttggagaa
ccgctgaccctgcaggagctggacacgagcagcggcgtcctcctgccgttcttcgaccca
gacacgggaatcatctacctctgtggcaagggagacagcagcatccgttacttcgaagtg
acggacgaggctccttacgtccactacctgtccatgttcagcagcaaggagagccagaag
gggatgggatacatgcccaagagaggcctggaggtcaacaagtgtgaaatcgcaaggttc
tacaaactgcatgagaggaaatgtgaacccatagtcatgacggtgcctcgtaagtcggat
ctattccaggaggatctgtacccagacaccgtcggacctgatccgtcggttgaagccgac
gagtggtttgatgggaaagaagctccgcctgttctgatttccctaaaggaagggtttgta
gccaccaccaagtccaaggaattcaaagtccataagagtctcctgaagactacgactgct
tctgcggggagccaatcagaaggcagtggggaggtgcagtctctaaggaaggaggtgaag
gacctgaaagcagctttagaggagctgaccaagcgcgtgaaagaactggagaccaaaaac
taa
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