Gambusia affinis (western mosquitofish): 122821831
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Entry
122821831 CDS
T07758
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
gaf04517
IgSF CAM signaling
gaf04530
Tight junction
gaf04810
Regulation of actin cytoskeleton
gaf05100
Bacterial invasion of epithelial cells
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122821831 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122821831 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
122821831 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122821831 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122821831 (zgc:86896)
05100 Bacterial invasion of epithelial cells
122821831 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122821831 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122821831 (zgc:86896)
Membrane trafficking [BR:
gaf04131
]
Others
Actin-binding proteins
Arp2/3 complex
122821831 (zgc:86896)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
122821831 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR75_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Rax2
Beta-prop_WDR3_2nd
Beta-prop_HPS5
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
122821831
NCBI-ProteinID:
XP_043956005
LinkDB
All DBs
Position
LG19:271664..286639
Genome browser
AA seq
356 aa
AA seq
DB search
MSLHSFGLEPLSCHAWNKDRSQIAVSPNNNVVNIYEKKGKDWHKIHELTEHSGRITGVDW
APVSNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKSIRSTVLSLDWHPNNILLAAGSADLHCRIFSTYIKEIEDKP
GPTAWGTKMPFGELLLEHKDCGGWVHSVSFSPSGDQLAWVAHNSSLTVVDAAQGKEVTQL
TTDLLPLLSVLYVNSTDIVAAGHDCCPYLFTYTGPHTLECVKKLDIPKQTSKGSLSAMQH
FRNLDKKATEEDNNELETLHQNSIMQLCVVSGEKAKVEKYSSVGLDGAMVIWNFKD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctccatagctttgggcttgagccgctctcctgccacgcctggaacaaagatagg
tctcaaattgctgtgagtcctaacaacaatgtggtgaacatttatgagaagaaaggcaaa
gactggcataagattcatgagctgactgagcacagtggacgcatcacaggtgttgattgg
gcgcctgtgtccaaccgtattgtgacctgtgcctctgatcgtaatgcctatgtgtggacg
ctgaaagatggtgtgtggaagcccactctcgtcctggtgcgtatcaaccgtgctgccacc
tgtgtgaaatggtccccgctggagaacaagtttgccttggggagtggagctcggctcatc
tctgtctgctactttgaaaaagagaatgactggtggctgagcaagcacattaagaagtcc
atccgttcaacagttctcagtctagactggcatcccaacaacattctactggcagctggg
tctgcagatcttcactgcaggattttctcaacctacatcaaggaaatcgaggacaaacca
ggccccacagcttgggggaccaagatgccttttggggagttgctgttggagcataaagac
tgtggtgggtgggtgcacagtgtctccttctcccctagtggggaccaattggcctgggtg
gctcacaacagcagcctcactgtggttgatgcagcacaggggaaggaggtaacccagcta
accacagaccttctgccactgctgagtgtcctttatgtcaactctacagatattgttgct
gcgggccacgattgctgcccttacctgtttacctacacaggtccacataccctggagtgt
gtgaagaagctggatatcccaaagcagacatcaaaaggcagtttgtcagccatgcagcac
ttccgtaacctggacaagaaggccactgaggaggataacaatgagttggaaactcttcat
cagaacagcatcatgcagctgtgtgttgtatcaggggagaaagccaaagtggaaaagtac
agcagcgtaggcctggatggagccatggtgatctggaattttaaggactga
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