Gambusia affinis (western mosquitofish): 122821846
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Entry
122821846 CDS
T07758
Symbol
caprin1a
Name
(RefSeq) caprin-1a isoform X1
KO
K18743
caprin-1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122821846 (caprin1a)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122821846 (caprin1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
122821846
NCBI-ProteinID:
XP_043956038
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All DBs
Position
LG02:complement(18098137..18107719)
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AA seq
637 aa
AA seq
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MPSAAVGNNAVQCAIPDLGNGSHSETMKQFLGVIDKKVRNMEKKKSKLDDYQARKNKGER
LNQDQLEALSKYQEIINNLDFARELQKSFLALGQEVQKAVKKSARREQLQREEMEQRRLK
TVLELQYLLDQLGEDGVRQDLKRPDSSGSPLLTDADLASFDEFYKLVGPDRDCDTRLTDQ
YEEASQHLWSLLEGRDKSVAGTTYKSLRETLDKLLISGYFDRAESKQNGACETEEKAEEQ
AVVDETAVTGEQPPEPEGPNNENYTEPVQVETTEFFNRQFVPETTYSSTDKDQVEEWTVE
AQMNSLQHHPPAQLVSEPTMAVNQAPPSPATDPVVRKQAVQDLMAQMQGTYNFMQDSMLE
FDGQALDPAIVSAQPMKALQTVDLQQMSGPSLHSEPRLPQTSTVSGPQESSQTSMSLSSE
QSSAPCTLSTAFPPVSKHIHSGGINVNAAPFQSVQAVFNMNAPVPPPTDGQADALKQSSQ
FPGGYGQGFTSQSENTVEQPEMPQERLQSVVGGFQPQDQVMPSTGSHDDPSPGSGFGPSS
QSFYSSRGAPRGGPRNTRGVMNGYRGSSNGFRGGYEGYRAPFSNAPSSSAYGQTQFNTSR
DYSNSSYQREGYQQGYKRGTAQGSRGLSRANAQAMRS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcagcggttggcaacaatgctgtccagtgtgccattccagacttgggaaat
ggaagtcattctgagacgatgaagcagtttcttggtgttatcgacaaaaaggtccggaat
atggaaaagaaaaagtccaaactggatgactatcaggccagaaagaataagggagaaaga
ctgaatcaggatcagctggaagccttgtcgaagtatcaagagatcatcaataaccttgat
tttgctcgagaactgcagaagagcttcctggctttgggccaagaggtccaaaaggcagtg
aaaaaatctgcacggcgagagcagcttcagcgggaggaaatggaacagcggcggttgaag
acggtattggagcttcagtatttgttggaccagctaggggaggacggcgtgcgacaggat
cttaaaagaccagattcctctggttctcctctactcacagatgctgaccttgcatctttt
gatgagttttataaactggtgggtcctgacagggactgtgataccagattaactgaccag
tatgaagaggcctcacagcacttgtggtctctccttgagggtcgagacaagtctgtggca
ggaaccacgtacaagtcactgagggagactctggacaaactactgatcagtggttacttt
gacagagcagaatctaaacagaacggggcttgtgagacagaagagaaagcagaagagcag
gctgttgtggatgaaacagcggttactggggagcagccacctgaacctgaaggaccaaat
aatgaaaactacacagagcctgtccaagtggaaaccacagagttttttaacagacagttt
gttccagaaactacatacagtagcactgacaaagaccaagtggaggagtggactgtggag
gctcagatgaattccctccagcaccacccacctgcacagctggtttctgagcccaccatg
gctgtgaaccaagctcctccctctcctgccactgaccctgtggtcagaaagcaggcggtg
caagatctcatggcccaaatgcaaggaacttacaacttcatgcaggattccatgttggag
tttgatggccaggctctggacccagccatcgtgtctgcccagccaatgaaagctctgcag
acggttgacctgcagcagatgagcggcccttcactccactcagaacccagacttcctcag
acaagtactgtatctggaccacaggaatcctcccaaacctctatgtctctgtcatctgaa
cagtcttctgccccatgtaccctgtctaccgccttcccacctgtctccaaacatatccac
tccggaggcatcaatgtgaacgcagcacctttccagtcagtgcaagcggtatttaatatg
aatgcacctgtacctccacccaccgacggccaagcagatgcactgaagcaatccagccaa
tttcctggtggctatggccagggctttaccagccagtcagagaacactgtagagcagccg
gaaatgccacaggaaagattacagtcagttgttggtggattccagcctcaagatcaggtc
atgccatcaacaggaagtcatgatgatccctctccagggtcagggttcgggccgtccagc
cagtcgttttacagcagcagaggtgcgcccaggggtggacccagaaacacccgtggcgtt
atgaatggatatcggggctcttcaaatggatttagaggtggttatgaaggataccgtgct
ccgttttcaaacgctccttccagcagtgcttatggccaaacccaatttaacacatctcgg
gactattccaacagcagctaccagcgtgagggatatcagcaaggctacaagcggggaact
gcccaaggatcaagaggcctgtcccgggccaacgctcaagcaatgcgatcctaa
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