Gambusia affinis (western mosquitofish): 122821862
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Entry
122821862 CDS
T07758
Name
(RefSeq) integrin alpha-3-like
KO
K06482
integrin alpha 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04810
Regulation of actin cytoskeleton
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122821862
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122821862
09142 Cell motility
04820 Cytoskeleton in muscle cells
122821862
04810 Regulation of actin cytoskeleton
122821862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122821862
04515 Cell adhesion molecules [BR:
gaf04515
]
122821862
04090 CD molecules [BR:
gaf04090
]
122821862
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122821862
Cell adhesion molecules [BR:
gaf04515
]
Integrins
Integrin alpha subunits
122821862
CD molecules [BR:
gaf04090
]
Proteins
122821862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
122821862
NCBI-ProteinID:
XP_043956081
LinkDB
All DBs
Position
LG19:22122484..22146692
Genome browser
AA seq
1036 aa
AA seq
DB search
MATDMFMLLSVCLSVSLAINIDTSFPVLKTIGSKNLFGFSVALHEDLETGKYLLLVGAPR
EKAEPHIPANRTGGVYSCPVTANPSECSRIKFIDENLDPTVDLLEDMWLGVTVASQGRPG
GRVLACGHRFVKVYQGDRKIIGRCYLHRNGQHLDEEPPNWEQIQQPCDYRGDHTGEGMCT
YGISAFITHTDAIFGSPGSYSWQGNVYAFWMNPNNDFFWTKNSFDHKNSSYRNIYLGYSV
TQALYLLSAESQTIVAGAPRDNKMDARGSVMLAVKRSNDLVIQQTLRGQQVGSYFGNVVV
AVDLNRDGWNDLLVGAPFYFNRQQEVGGAVYVYMNKGGRFHSEATVVLMGSVGSAFGMAV
AAAGDLNQDGYQDFVVGAPFHDTGCVMIWTGSQEGISAEPSQMIEGRSVSPGFKTFGYSL
AAGVDVDGNHYPDLLVGSLDDTVALLRSRPVIQLNTTLRVSPGVVARNETDIKVKVCFFF
KFNAGENLSSISVNFTVTGDVTSLSPRLRFHDNRQSVYSSIQSVGSGKCKTLKAGLLSTI
QNVVEPLVFSLNVSLNEKLPNRSNIVQDLKRFPILSPTPQLTKTLIHIKKACGSDNVCQS
NLQMVAWFTDEDYKPFPMQDGNQLLNYNSSIRRLLLEVNVSNTASPGRLAEDAHNTVLNV
SVPPSLVYSGVQKKGGSSGAIECSVDGATLLCQLGNPFKTNQKIQMFIKFEPSAIALDTK
EIQSRLVLSTLSNQSDLSPVFVSLLVEYSLQATLTVIKPGSVFFSGQVVGERAMKSTEDV
GSLVVFTFQVHVQGKPLGHLGELEVEFDWPKEVANGKWLLYLTEVLLEGTSNRQCTHGDI
INPLKLVMSNDERTMRMRLGMKGEEERKQQEKTLPVLSMQRQRKNFKLSCSSGARCVKFS
CPLLNMNNSATLLVKSRLWNSTMIEDYRDASSVLVQGLATLKLKTMKRTVTMKSSPSLIE
VSIYPEFELQLNSGAPWWIIMVSVLAGVLLLALICVLLWKCGFFKRASTREMYEAKTQRA
HMKSQPSDMDKLTEEL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagatatgtttatgctgctgagcgtctgcctcagtgtgagcctggcgatcaac
atcgacacgtcgtttccggtgctgaagacaatcgggagcaagaatctctttggattctca
gttgctctgcatgaggatctggagacgggaaaatacctgctattggtcggcgctcccagg
gagaaggcggagcctcacattccagccaatcgaacagggggcgtgtacagctgcccggtc
acggctaacccatcagagtgcagtaggataaaattcatagatgaaaacctggaccccact
gtggacctgctggaggacatgtggttgggcgtcacagtagccagtcagggccgacctgga
gggagggttctggcatgtggacaccggttcgttaaggtctaccagggagatagaaagata
attggccggtgctatctccatagaaacggccaacatcttgatgaagagccgccaaactgg
gagcaaatacagcagccatgcgattacaggggggatcacaccggtgagggcatgtgtact
tatggaatctctgccttcatcacgcacaccgacgccatctttggctcacctgggagctac
agttggcaaggaaatgtttatgccttctggatgaatccgaacaatgactttttttggaca
aagaactcctttgaccacaagaactcaagttataggaatatttatttaggatactcggtc
actcaggctctttaccttctctctgcagagagtcaaaccatcgtagcaggggctcccaga
gacaataaaatggatgcccgtggttctgtgatgctggcggtcaagcgatccaatgatctg
gtgattcagcagactctacgaggtcaacaggttggctcgtactttggtaacgtcgtggta
gccgtagacctcaacagggatgggtggaatgacctgctggtgggtgctcctttttacttc
aaccgccagcaggaggtgggtggggcagtttatgtttacatgaataaaggagggaggttc
cactctgaagccactgtggttctgatgggttcagttggatctgcttttggaatggctgtt
gctgcagcaggggacctcaaccaagatggctatcaggactttgtagtgggagctcctttt
cacgataccggatgtgtgatgatctggactgggagccaagagggaatctctgcagaaccg
agtcagatgatcgaaggacgttctgtatctcctgggttcaagaccttcgggtactccctg
gctgcaggtgtggatgttgatggaaaccactacccagacctcctggtcggctctctggac
gataccgtcgccctcctcagatctcgccccgtcatccagctgaacaccacattaagagtt
tctccaggtgtggtcgcccgaaatgagaccgatatcaaggtgaaggtgtgcttcttcttc
aagttcaacgctggagaaaacctcagcagcatctctgtcaactttactgtgactggagac
gtcaccagtctctcgccccgcctccgtttccatgacaacagacagagcgtgtactccagc
atccagtcagtaggaagtggaaagtgtaaaaccctgaaagccggactgctgagtaccatc
caaaacgtggtggaacctctggtgttctccctgaacgtctctctaaatgagaaacttccc
aacagaagcaatattgttcaagatctgaagcgcttccccatcctaagcccgacacctcaa
ctcaccaaaaccctgattcacatcaagaaggcctgcgggtctgataacgtctgtcaaagt
aaccttcagatggtggcctggttcacagatgaggattacaaacccttccccatgcaggac
ggcaaccaactgctgaactacaacagcagcatcaggaggttacttctggaggtcaacgtc
agcaacacggcgtcaccaggccgactagcagaggatgctcacaacactgtcctcaacgtc
agcgtcccgccgtcgcttgtttactctggagtccaaaaaaaggggggcagctcaggagcc
attgagtgttctgttgatggggccactcttctctgtcagctgggaaatcccttcaaaacc
aaccagaagattcagatgttcattaaatttgagccatctgcgatcgctttggacaccaag
gaaatccagtctcggctggtgctgtccacgctcagcaaccagtcagatctgtctccagtc
ttcgtctccttgctggtggagtattccctgcaggcgactctcactgtaatcaaaccgggt
tcagtcttcttcagtggtcaggtggttggtgagcgggccatgaagagcacggaggatgtg
ggcagtctggtggtcttcacctttcaggttcacgtccaggggaagcctctgggtcacctt
ggcgagctggaggtcgagttcgattggccgaaggaggtggcgaacggaaagtggctgctg
tacctgacagaggtcctcttggaaggcacctcgaatcgtcaatgcacacacggcgacatc
atcaaccctttgaagcttgtgatgtccaatgatgagaggacgatgaggatgaggctgggg
atgaagggagaagaggaaaggaaacaacaagagaaaactctcccagtcctcagcatgcag
agacagaggaagaactttaaactgagctgcagcagtggggccaggtgtgtgaagttctcc
tgtcctctgctcaacatgaacaactctgcaactctgttggtgaagagccggctgtggaac
tccaccatgattgaggactacagagatgctagcagtgtgttggttcaaggcctggccact
ttgaaattgaagaccatgaagagaaccgtcaccatgaagtcgtccccctcactgattgag
gtcagcatttacccagagtttgagctgcaactgaactctggcgccccctggtggatcatc
atggtgtcagtcctggctggagttctgctgctggctctgatctgcgttctgctttggaag
tgtggcttcttcaagagagccagcaccagggagatgtacgaggccaagacccaaagagcc
cacatgaagagccagccgtctgacatggacaagctgaccgaggagctctga
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