Gambusia affinis (western mosquitofish): 122821893
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Entry
122821893 CDS
T07758
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122821893
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122821893
Membrane trafficking [BR:
gaf04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122821893
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
122821893
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7491
GAS
TolA_bind_tri
Trimer_CC
BLOC1_2
YwqH-like
TPR_MLP1_2
Sec10_N
HALZ
DUF4200
DUF4515
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
122821893
NCBI-ProteinID:
XP_043956131
LinkDB
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Position
LG19:20662386..20677345
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AA seq
449 aa
AA seq
DB search
MESQRVQSSYRKRFGPQGGSGARIGSLSSNRLSWHGTPRSITLSSPISRLSLGSASTALL
LGSPGDRLDFSADSLMKAHYKEIRTNEKMEMMGLNDRFASYIEKVRLLEQQNKMLVAELN
QLKVKEPSRLGDIYQDELRELRRQVDGLTNGKARLEVERDNLAADLAMLKQRLQDEMTLR
QEAENSLNTFRQDVDEAALSRVQLERKIESLQDEINFLKKIHEEELRELQDQLVAQQVHV
DLDVSKPDLTAALRDIRVQYENMATSNMHETEEWYRSKFADLTDAANRNAEALRQAKQDA
NEYRRQVQALTCDLDALRGTNESLERQLRELEDRCAMEAAGYQDTVSRLEEEIQALKEEM
ARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQSFSNLQFRETNLDTKTPEAH
VKRSILVRTVETRDGEIIKESTTEHKDLP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagagccagagggtccagtcctcatacaggaaacgttttgggccacagggcggctcg
ggcgccagaatcggtagcctgtcttccaaccgcctctcctggcatggcaccccgcggtcc
atcaccctctccagccccatttccaggctctccctgggctctgccagcacggccctgctg
ctggggagccccggcgaccggctggacttctccgccgactccctgatgaaggcccactac
aaagaaatacgcaccaacgagaagatggagatgatgggcctgaacgaccgctttgccagc
tacatagagaaggtgcgcttgctggagcagcagaacaagatgctggtggcggagctgaac
cagctgaaggtgaaggagcccagccgcctgggagatatctaccaggatgagctcagggag
cttcggcggcaggtggacgggctcaccaacgggaaggcccggctggaggtggagagggac
aacctggctgccgatctggccatgctgaagcaaagacttcaagatgagatgactctgcgt
caggaagcagaaaacagtttgaacactttcagacaggatgtggacgaagcggctctcagc
cgagtccagctggagaggaagatcgaatctctgcaggacgagatcaacttcctgaagaaa
atccacgaggaggagctgcgtgagctgcaggaccagcttgtggcccagcaggtccatgtc
gacctggacgtgtccaaaccggatttgactgcggctctgagggacatcagagttcagtac
gagaacatggccacgtccaacatgcacgaaaccgaggagtggtaccgatccaagtttgct
gacctgacagacgcggccaatcgaaatgcggaggccctgcgccaagcgaagcaggacgcc
aacgaatatcggcgtcaggttcaggctctgacctgcgacttggacgctctcagaggcacc
aacgagtctctggagcgccagctgcgggagctggaggaccgctgcgccatggaggctgcc
gggtaccaggacacggtgagccgcctggaggaggagatccaggccctgaaggaggagatg
gcccggcatctgcaggagtaccaggacctcctcaatgtcaaactggctctggacatcgag
atcgccacctacaggaaactgctggaaggagaagagagcaggatcaccatcccagttcag
agcttttccaacctgcagtttagagaaactaatttggacactaaaactccagaggctcat
gtgaagcgaagcatcctggtccgaactgtggagaccagagacggggagatcattaaggag
tcaaccactgaacacaaagaccttccttga
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integrated database retrieval system