Gambusia affinis (western mosquitofish): 122821897
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Entry
122821897 CDS
T07758
Symbol
ccdc47
Name
(RefSeq) PAT complex subunit CCDC47
KO
K24962
PAT complex subunit CCDC47
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gaf03110
]
122821897 (ccdc47)
04131 Membrane trafficking [BR:
gaf04131
]
122821897 (ccdc47)
Chaperones and folding catalysts [BR:
gaf03110
]
Other chaperones and cochaperones
Others
122821897 (ccdc47)
Membrane trafficking [BR:
gaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
122821897 (ccdc47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
122821897
NCBI-ProteinID:
XP_043956139
LinkDB
All DBs
Position
LG19:20729154..20738610
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AA seq
486 aa
AA seq
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MRSAFFLLVPTLLLLLALPAARGRYNDDFDDGEDLADFDDNDFAEFEDMNDDLTAEAETA
PPPRVSSPSSQTEDDEDEATVELEDGQDGFEDSDTQDEDMYSKYDKDEFEGMEKTGHSMK
DPLIIHTVPAHLQNSWESYYMEILMVTGLLCYIMNYIIGKNKNSRLAQAWFNSHRELLES
NFALVGDDGTSKEPVSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNTVTRM
MRPASDQVQVKVTLNDEDMDTFVFAVGSKRAMARLQKEMQDLSEFCSDKPKSGAKYGLPD
SMAILSEMGEVTDGVMDNKMVHYITNHADKIESIHFSDQFSGPKIMQEEGQPLKLPETKK
TLLFTFNVPGYGSTSPKDMDSLLPLMNMVIYSIDKVKKLRLNREGKQKADRNRARVEENF
LKQTHAQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRREQKKIEKKQMKMKQ
IKVKAM
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtgcatttttcctcctggttcccacactgttgctcctcctggcccttcctgcc
gccagaggacgttacaacgacgactttgacgacggcgaggacctggcagactttgatgac
aatgacttcgcagagtttgaggacatgaatgatgatttaacagcggaggcggagacggcc
ccgccgccacgcgtctcatcaccttcctcacagactgaagacgacgaagatgaagccacc
gtggagctggaggatggtcaggatggtttcgaggactccgacacacaagacgaagatatg
tacagcaaatatgacaaggacgagtttgaggggatggagaagacgggccactccatgaag
gacccgctcataatccacacggttcctgcacacctgcagaacagctgggagagttactac
atggagatcctgatggtgacgggtttactgtgctacatcatgaactacatcataggcaag
aacaagaacagccggctcgcccaggcctggtttaactcccacagagaacttctggagagc
aactttgcacttgtgggcgatgacggcaccagtaaagaacctgtgagcactgggaagctg
aatcaggaaaacgaacacatctataatctgtggtgctctggccgtgtgtgctgtgaagga
atgctgattcaactcaagttcctgaagaggcaggacctcctgaacacggtgaccaggatg
atgaggcccgcctctgaccaagtgcaagtcaaagtgacgcttaacgacgaagacatggac
actttcgtctttgctgtgggctctaagagagccatggctcggctgcagaaggagatgcag
gacttgagcgagttctgcagcgacaagccgaagtcgggggcaaaatatgggcttccagac
tccatggcaattctcagtgagatgggggaagtaacggatggtgtgatggataacaagatg
gttcactacatcaccaaccatgctgacaagatcgagtcgatccatttctcggatcagttt
tctggtccaaaaattatgcaagaggagggtcagccattaaagctgcctgagaccaagaag
actctactgtttacatttaatgtgcctggctacggcagcacgtctcccaaagacatggac
tctctgcttccgctcatgaacatggtgatctacagcatcgataaggtcaagaagctccga
ctgaacagagagggaaagcagaaagcggacagaaatcgggctcgcgttgaggagaacttc
ctgaaacagacgcacgctcagcgccaggaagcagcccagacccgcagagaggagaagaaa
agagccgagaaggagaggatcatgaacgaagaggatcctgagaggcaacgccgtctggag
gaagcagcgcagcggcgcgagcagaagaagattgagaagaagcagatgaagatgaagcag
atcaaagtgaaagccatgtga
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