Gambusia affinis (western mosquitofish): 122822060
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Entry
122822060 CDS
T07758
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122822060 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gaf01007
]
122822060 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122822060 (farsa)
Enzymes [BR:
gaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122822060 (farsa)
Amino acid related enzymes [BR:
gaf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122822060 (farsa)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122822060 (farsa)
Prokaryotic type
122822060 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
DUF5953
Motif
Other DBs
NCBI-GeneID:
122822060
NCBI-ProteinID:
XP_043956358
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All DBs
Position
LG19:complement(4086659..4094458)
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AA seq
497 aa
AA seq
DB search
MADTGVVETFLQRIEKVDGGADSLEVAASLGVDHQVIVGAVKSLQALGDVISAELRSSKH
WELTEEGTEIAEQGSHEARVFNSIPLEGLPQAELMKLSFGKIGFSKAMSNKWIRVDKSHD
GGPRIFRTAESIQDQVREKLLLAKQGDAARLDEKEKNELKKRKLLAEVTVKSYWIIKGNS
FSATVTKQETELTPEMIASGSWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLE
MGFSEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPSLAHHFPMDYLERVKKVH
SEGGYGSQGYKYDWKMEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGVLHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPICRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggtgtggtggaaacgtttcttcagcggattgagaaggtggacggcgga
gcggacagcctggaagtggcagccagcctcggggtggaccaccaggtcatcgtcggagct
gtgaagagtctgcaagcgcttggcgacgttatctcagcggagctgcgctcttccaaacac
tgggaactgaccgaggagggcaccgagatagccgagcagggcagccatgaagcccgtgtc
ttcaactccatccccctggagggtctgccacaggctgagctcatgaaactctccttcggg
aagatcggcttcagcaaggccatgtccaacaagtggatccgcgtggacaagtcccacgac
ggaggccccaggatattcagaaccgcggagagcatccaggaccaggtcagagagaagctg
ctgctggccaaacagggcgacgcggcacggctcgacgagaaggagaagaacgagctgaag
aagagaaaactcctcgctgaagtcaccgttaagtcttactggatcataaagggaaactcc
ttcagcgccacggtaaccaagcaggagacggagctgactcctgagatgattgccagtggc
agctggaaagagaagaagtttaagccgtacaacttcgaggcgatgggcgtggcccccgac
tgcggacacctccaccctctgatgaaggtgcggacgcagttcaggcagatcttcctggag
atgggtttctccgagatgccgaccaacaacttcatcgagagctccttctggaatttcgac
tctctgttccagcctcagcagcacccggccagagaccagcacgacaccttcttcctgtcc
gacccgtcactcgctcaccacttccccatggactacctggagagagtgaagaaggtccac
tcagagggcggctacggctcgcaggggtacaaatacgactggaagatggaggaggctcag
aagaacatcctccgaacgcacactacagctgttagcgctcgcatgctgtataagctagca
cagcaggaaaagttcacccctgtcaagtatttctccatcgaccgggtgttcaggaacgag
acactggacgccacccacctggcagagtttcaccagatagagggggtggtggccgactac
ggcctcacgctgggggacctgatgggggtgctgcaccagttcttcaccaaactaggaata
accaaactgcgcttcaagccagcttacaacccctacacagagcccagtatggaagtgttc
agctaccatgaagggctgaaaaagtgggtggaagtggggaactctggggtgttcaggcca
gagatgctgctgcccatgggcctcccggaggacgtgtcggtgatagcctggggtctgtct
ctggagaggcccaccatgatcaaatacggcatcaacaacatcagagagctggtgggacac
aaggtgaacctgcagatggtctacgacagccccatatgtcgactggactcctga
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