Gambusia affinis (western mosquitofish): 122822108
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Entry
122822108 CDS
T07758
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122822108
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
122822108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
I-set
CarboxypepD_reg
CarbopepD_reg_2
Ig_2
TSP1_spondin
ig
Prok-E2_C
Motif
Other DBs
NCBI-GeneID:
122822108
NCBI-ProteinID:
XP_043956451
LinkDB
All DBs
Position
LG02:complement(18675376..18685833)
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AA seq
1159 aa
AA seq
DB search
MSHRSLLIFLGVTAATVLTVQGSWRGNNKESKRAVYHSDDNFEWTTWFNVDHPGGRGDYE
QLDAIRFYYRTRVCESPRAVEARTTEWVPARETGEVVHADPTVGFWCLNEEQSPGRNCSN
YAVRFLCPKERSVNTQGTWGLWSNWSPCPALCGQVGVQLRYRNCQSQSVTCNGPKIEGKP
CNGPECIKTDCYLHCVIGRVNADCDACMCEEHILLGSVRSAGGLIAEGAAILRSGKLLTL
TDHNGHFRIPGICPDGNTTLTVSLLGHASLDVVVPLTTERTSVLSVQLKRAEKLHVLSNP
ESKARREGQSAAFCCKVAGIPQPNKYQWFHNNIIMELQSESTLVLKDLHPEQAGEYYCRA
SGPSGAVKTKPAILKIIGREEHSCNPTPESHLIRLPHDCYQNSTNSFYYDVGKCPSATCA
GQLDNAIRCKDNVAYCCGVAKMEERQLTCQGYQLPTMVVTECGCQKCVDSKAVVYGRAIA
ADNGEPMRFGHIFKNGVRIGRTGYKGTFSVQVPPDTERLVLTFVDNMQKFVNTTKVLPFN
TKGGAVYHEIKVLRKKAPVTISSSETNTLNLGEVEGQEAMVQIQIPPHSFYKENGEVFTG
NVNASVTFLDPRDVTTAAAASSDLNFIGGDGDVLPLRTYGMFSVDFRGEENNEPLNAGEV
KVFLDSAQVKMSEHLSNMKLWSLNPETGLWEEEGSLQLDKRRRGKREERTFLIGNMEIRE
RRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVVSLINMEPTPGYSSNPRAWGRFDS
VVTGPNGACLPAFCDEQKPDAYSAYVMANLGGEELEAVPSAPKLNPSLVGVPQPYLRKLN
YRRTDHEDSRVKKTAFSINVAKPSPNAAEESNGPVYAFEKLKECEEAPFSAAHFRFSRVE
GDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKINSPHEINVRSRNMGGTHP
KTVGQLYGLRDTRSIRDMEQANVSAVCLEFKCSGMLHDQDRVDRTLVKVIPQGSCKRDHV
NTMLQDYLVNHLPLAVNNDTNEFTMLAPLDSLGHNYGIYTETEQDPRTAKEIALGRCFDG
TSDGTSRVMKTGEGVALSFSCGDREVTRQSVFQAMQSSQSQIVTSVARGDNRKTRRRQRA
NTLRRSGKRSARNPTGGKR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcacataggtctcttctcatctttctgggagtaactgcagccactgttcttacagtt
caaggatcatggagaggaaacaacaaagagtctaaacgtgcagtctaccactctgatgac
aactttgagtggaccacatggttcaacgttgaccacccaggaggccgaggcgactacgag
cagctggacgccattcgcttctattaccgtaccagagtgtgtgagagtccgcgtgcagtt
gaagctagaaccaccgaatgggtcccagcccgggaaactggggaggtggtacacgcagat
ccaactgtaggattctggtgtctcaatgaagagcaaagtcctggacgcaactgctctaac
tacgcagttcgctttctctgtccaaaagaaagaagtgtaaacactcagggaacctggggt
ctatggtcaaactggagcccatgtcctgctctctgcggtcaagtaggtgtgcagcttcgc
tatcgaaactgccagtctcaatcagtaacttgcaatgggcctaaaatagaggggaaaccc
tgcaacggacctgagtgcatcaagacagattgttatctgcactgtgtgattgggagagtg
aatgctgactgtgatgcttgcatgtgtgaagagcacatccttttgggttctgtgcgaagc
gccggtggtctgattgctgagggagcagcaattcttcgctcaggcaaactcctcaccctc
acagaccacaatgggcactttagaattcctggaatatgcccagatggcaacacaacactg
acagtcagcctgctgggtcacgcatcgcttgatgtcgttgttcccctcaccactgagcgg
acctcagtgctcagtgtacagttaaaaagagcagaaaagcttcatgtcttaagcaaccct
gagagtaaagccaggagagaaggacaaagtgctgccttctgctgcaaagtagctggaata
ccacagcctaacaagtaccaatggtttcataacaacattattatggaactgcaatccgag
agcacgctggtcctgaaagatttacatccagagcaagctggagagtactactgcagagca
agtgggccgtccggcgccgtcaagaccaaacctgccattctgaaaatcataggtagagag
gagcattcatgcaaccccacgcctgaatcacacctcattcgtcttccacatgactgctac
caaaacagtacaaactccttctactacgatgtgggcaagtgcccttcagccacctgtgct
ggacagctggacaatgccatcaggtgcaaagacaatgtggcatactgctgtggcgtggca
aagatggaagagaggcagctgacgtgccaaggctaccagttgcccaccatggtagtgaca
gagtgtggctgtcagaaatgtgtggactccaaggctgttgtttatggtcgtgccattgct
gcagacaatggtgagccaatgaggtttggccacatcttcaagaatggagtcagaatcggc
cgcacaggctacaaaggcaccttctccgtccaggttcccccagacactgaaagactggtg
ctgacttttgttgacaacatgcaaaaatttgtcaacaccacaaaggtgcttccatttaac
acaaaaggaggagctgtttaccatgaaatcaaagttctacgaaagaaagctcctgtgacc
atcagctcctcagaaactaacactctaaatctcggggaggtagaaggccaggaagcaatg
gtccaaatccagattccccctcattctttctacaaggagaacggagaagtctttaccggt
aatgtcaatgcaagtgttacatttttagacccaagagatgtcactactgctgctgctgct
tcaagtgaccttaattttataggaggtgatggtgatgtgcttccactgagaacctacggc
atgttttcagttgactttagaggtgaggaaaataatgagcctctaaatgctggcgaggtt
aaagtattcttggactcagcccaggtgaagatgtcagagcacctcagcaacatgaagctt
tggtcactgaaccctgaaactggcctgtgggaggaagaagggagtttgcagctagataag
agaaggagaggcaaaagagaggagagaacatttttgataggaaacatggagatcagagag
aggcgtctgtttaatcttgatgtccctgaaaatcgcagatgctatgtgaaagtgagagct
ttccgcagtgagcgtttcatgcccagtgagcaggtagagggagttgtggtgagtctcata
aacatggaaccaacacctggctactcctctaatcctcgtgcctggggtcgttttgatagt
gttgtcactggcccgaatggagcttgtcttcctgccttctgtgatgagcaaaaacctgat
gcttattctgcatatgtgatggctaacctcggaggagaggaactagaggctgtgccttca
gctcctaaactcaatcccagccttgttggagtgccccagccttaccttagaaagctaaac
tacaggcgaacagaccacgaagacagcagagtaaagaagactgcatttagtatcaatgtg
gcgaaaccaagtcctaacgcagctgaggagtctaatggaccggtatatgcatttgaaaag
ctgaaagaatgtgaagaggccccatttagtgctgcacacttcaggttttcaagagttgaa
ggagaccgttatgattacaacactgtgccatttaatgaagatgacccaatgagctggaca
gaggattacctgagttggtggcctaagcccatggaataccgggcctgctacatcaaggtt
aaaattaacagtccgcatgaaatcaatgtaaggtctcgtaacatgggtggcacccatcca
aagacagtaggccagctgtatggtctcagagacactcgcagtattcgtgatatggaacag
gcaaatgtttcagcagtgtgtctggagttcaagtgcagtggcatgctgcatgatcaggac
cgtgtggatcgtaccctggtgaaggtgattcctcaaggtagctgtaagagagaccatgtg
aacacgatgcttcaagattatctggtgaaccacctacctctagctgtcaacaatgacacc
aatgagttcaccatgctggcacctcttgactctcttggccacaactatggaatctacaca
gagacggaacaagatccgcgcacagcaaaagagattgcacttgggcgctgctttgatggc
acttctgatggcacatctagagtcatgaaaaccggtgagggtgtggcattaagcttcagt
tgtggggatcgtgaagtgacacgtcagagtgtctttcaagctatgcagagctcccaaagt
cagatagtaacaagtgttgcgagaggagacaacaggaagaccagacgtcgacaaagggcc
aacacactccgcaggagtgggaaacgtagcgccagaaatcccacaggaggaaaaagataa
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