Gambusia affinis (western mosquitofish): 122822205
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Entry
122822205 CDS
T07758
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00260
Glycine, serine and threonine metabolism
gaf00630
Glyoxylate and dicarboxylate metabolism
gaf00670
One carbon pool by folate
gaf01100
Metabolic pathways
gaf01200
Carbon metabolism
gaf01230
Biosynthesis of amino acids
gaf01240
Biosynthesis of cofactors
gaf04981
Folate transport and metabolism
Module
gaf_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122822205 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122822205 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122822205 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122822205 (shmt1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
122822205 (shmt1)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
122822205
NCBI-ProteinID:
XP_043956624
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Position
LG19:6675960..6683129
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AA seq
482 aa
AA seq
DB search
MSVTNGHSVGKGTWDSHSKMMLEPLSVNDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAFGLNSEKWGVNAQPYSGS
PANFAVYAAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDKLQENARLFHPKLIIAGTSCYSRNLDYGRLKQIASENGAYLMGDMAHISGLVAAGVV
PSPFDHCDIVTTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLEPLINQAVFPGLQG
GPHNHAIAGVTVALKQALTPEFKAYQLQVLANCKALSSSLMDLGYKIVTGGSDNHLILLD
LRNKGTDGGRAEKVLEACAVACNKNTCPGDKSALRPSGLRFGSPALTSRGMVEEDFKKVA
HFIHRGIELTLEVQRSLDPKATLKEFVQALAQGEKFQQRVSEVRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaacaaatggtcacagcgtgggcaaaggaacatgggactcccacagcaagatg
atgctggagcctctgtccgtcaacgactcagaggtgttctccatcataaagaaggagaag
cacaggcagacgtacggactggagctgatcgcttcggagaacttcgccagcagagcggtt
ctcgaagctctcggttcctgcatgaacaacaagtactctgagggttaccccggccagagg
tactatggtggaactgaacatgtggatgagctggaaaggctttgccagaagagggcgctg
gaggcctttggtctgaactctgagaagtggggagttaatgctcagccatactcaggttcc
ccggccaactttgcggtctacgccgccgtggtggagccgcacggccggatcatgggcctg
gaccttcccgacggcggccacctcactcacggcttcatgaccgagaagaagaaaatctca
gcgacgtccatcttctttgaatccatgccctataaggtgaacccagagaccggctacatt
gattatgacaaactgcaggaaaacgcccggctgttccacccaaagctcatcatcgcagga
acaagctgctattcccgtaaccttgactacggccgcttgaagcagatcgccagcgagaac
ggcgcctatctgatgggggacatggctcacatcagtgggctggtggcagccggggtcgtg
ccctcgccctttgatcactgtgacatcgtcacgacaaccactcacaaaactctccgcggc
tgccgcgccgggcttatcttctatcggaaaggagtgcggagtgtggacgccaaagggaaa
gagacgctgtacaacttggagcctttgatcaaccaggccgtgtttccagggctgcaggga
gggcctcacaaccacgctattgcaggtgtcaccgtggctctgaaacaagccttgactcca
gagttcaaggcttaccagctgcaggttcttgctaattgcaaagctctgtccagttccctc
atggacctcggctacaagattgtcaccggcggttctgacaaccatttaatcctgctggac
cttcgcaacaaaggaacggacggaggacgagctgagaaggtcttggaggcctgcgccgtc
gcctgcaacaagaacacctgtccaggcgataagagtgctctgcgtccaagcggtctgagg
tttggctctccggctctgacctccagaggaatggtagaggaagacttcaagaaggtggcc
cacttcattcatagaggtattgagctgactttggaagtgcagagaagtctggaccctaag
gccaccctgaaggagttcgtccaggcgttggctcagggagagaagttccagcagcgggtg
tcagaggtcagggcggaggtggaggccttcgccgggcagttccccatgccgggccttcct
gaactgtag
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