Gambusia affinis (western mosquitofish): 122822208
Help
Entry
122822208 CDS
T07758
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122822208 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122822208 (cpsf4)
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122822208 (cpsf4)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122822208 (cpsf4)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122822208 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
122822208
NCBI-ProteinID:
XP_043956628
LinkDB
All DBs
Position
LG19:6685738..6689506
Genome browser
AA seq
272 aa
AA seq
DB search
MQELLANVDHIKFDLEFAVEQQLGAQPLPFPGMDKSGSAVCEFFMRGACMKGKETTISAG
GMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPF
LHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKACKFMHPRFELP
MGTSEQPPLPQQAQIQTKAASVNRSSLSLIQLTNTSPIQRPQNNINSGVQQNHMSVNRGP
RPLDQVTCYKCGEKGHYANKCNKGHLAFLSGQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttactggccaacgtggatcacatcaagttcgacctggagtttgctgtggag
cagcagctcggagcgcagcctctacctttccctggcatggataagtccgggtcagctgtg
tgtgagttcttcatgaggggagcttgtatgaaaggtaaagaaaccacaatttcggcaggc
gggatgtgtccgttccgccacatcagcggagagaagacggtggtgtgtaaacactggctc
agaggcctgtgcaagaagggagaccagtgcgagtttcttcacgagtacgacatgaccaag
atgcctgaatgctacttctactcgaaattcggagaatgtagcaacaaggagtgtcccttc
ctgcacattgacccagagtcaaagatcaaagactgtccgtggtacgaccgaggattctgt
aaacacggtcccgactgcagacacagacacacacggcgggtaatctgtgtgaactacctg
gtgggcttctgtcctgaagggaaagcctgtaaatttatgcatcctcggtttgagctgcca
atgggaacgtccgaacagcctcctctgccacaacaagcacaaattcagaccaaggctgcg
tctgtcaaccgctcctcgctctctctcatccagctgaccaacaccagtcccatccagcgg
ccgcagaacaacatcaactctggagttcagcagaatcacatgtccgtcaacagagggcct
cggcctctggaccaggtcacctgctataagtgtggagagaagggccactatgccaacaaa
tgtaataagggtcaccttgccttcctgagcggacagtag
DBGET
integrated database retrieval system
