Gambusia affinis (western mosquitofish): 122822216
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Entry
122822216 CDS
T07758
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
gaf04137
Mitophagy - animal
gaf04144
Endocytosis
gaf04340
Hedgehog signaling pathway
gaf04350
TGF-beta signaling pathway
gaf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122822216 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122822216 (smurf1)
04350 TGF-beta signaling pathway
122822216 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122822216 (smurf1)
04137 Mitophagy - animal
122822216 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
122822216 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122822216 (smurf1)
04121 Ubiquitin system [BR:
gaf04121
]
122822216 (smurf1)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122822216 (smurf1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122822216 (smurf1)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122822216 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
122822216 (smurf1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
HECT type E3
122822216 (smurf1)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122822216 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
122822216
NCBI-ProteinID:
XP_043956638
LinkDB
All DBs
Position
LG19:complement(6895016..6914254)
Genome browser
AA seq
725 aa
AA seq
DB search
MSNPGSRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISIWNHKKIHKRQGAGFLGCIRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGGGGPVVDCRGLLENDGPVFEGCFSEEPLPYSDPTGA
AGGGNCRLDSPGQESRLQTLRIRGPDSRGHGHTPQNRPHGHQPPDLPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLASVSCEELGPLPVGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHNIISHQSQAKETSQAPPMDVGVDEGGGGGGDGDVAVRYERDLVHKLKLLRHELSLQ
QPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLC
HEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRVMGLAVFHSHYINGSFTL
PFYKQLLGKPIQLNDLETTDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFSQHELKP
NGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFSELIPQHLLKPFDHKELELII
GGLGKIDLADWKANTRLKHCTGESNVVRWFWQAVEAFSEERRGRLLQFVTGSTRVPLQGF
KALQGSTGSAGPRLFTIHLIDANTENLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETC
GFAVE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggagtcggagaaacgggtccagcatcaaaatccgactgacagtatta
tgtgccaagaacctcgcgaagaaagacttctttcgcctaccggatcctttcgctaaggtg
gtggtagacggatcgggtcaatgccactccacagacacagtcaagagcacactggacccc
aagtggaatcagcactatgacctctacatcgggaagaccgactcgatcaccatcagcata
tggaaccacaagaagatccacaagcggcagggggccgggtttttgggctgcatacgactg
ctttccaacgccatcagcaggctaaaagacacaggataccagcgtctagatctatgcaag
ctgaacccctctgacagtgacgcagtgagggggcagatcgtagtgagcttacagacgcgg
gaccgcattggcggcggcggtcctgtagtggactgcagaggactgttggaaaacgatgga
cccgttttcgagggctgcttcagcgaagagccgctgccgtactccgaccccaccggcgcc
gcgggcggcgggaactgccggctggactcgccgggtcaggagagccgtctgcagactctg
cgaatccgagggccggactccaggggtcatggccacacccctcagaacagacctcacggg
catcaaccgcctgatctgccggagggatacgagcaacgaacaactgtgcaaggccaggtg
tacttccttcacacacagacaggcgtcagcacctggcacgaccctcggataccgcgggat
ctggccagcgtgagctgtgaggaactcggcccgctgccagtggggtgggaggtccgaagc
accgtgtccggccgcatctactttgtggaccacaacaaccggaccacgcagttcacagac
ccccgtctgcacaacatcatcagccaccaatcccaagcgaaggagacgtcccaggccccg
ccgatggacgtcggcgtggacgaggggggaggcggaggaggagacggcgacgtggcggtc
cgctacgagcgagacctggtgcacaagctgaagctgctgcgccacgagctgtcgctgcag
caacctcaagcgggacactgccgcattgaggtgtcccgagaggagatctttgaggagtcg
tatcgacagataatgaagatgaggccgaaggacctgaagaaacggctgatggtgaagttc
agaggagaggagggccttgattacggaggagtggccagggagtggctgtatctgctgtgt
catgaaatgttgaacccctactacggcctcttccagtactccactgacaatatctacaca
ctacagatcaaccccgactcctccatcaaccctgaccacttgtcctattttcactttgtg
ggccgcgtgatgggcctggcggtcttccacagtcactacatcaacggcagcttcacgctg
cccttctacaagcagctgctaggcaaacccatccagctcaacgacctggagaccacggac
ccggagttgcacaagagcctcgtctggatattggagaatgacatcacttctgtcctggat
cacaccttctgcgtggagcacaatgcctttgggaagttctcccaacatgaactcaagcct
aacggcagaaatgttcccgtcaccgaggagaacaagaaggaatacgttagactttatgtg
aactggaggttcatgcgtgggattgaagcccagtttctggctctccagaaaggattcagt
gagctgatcccacagcacctcctcaaaccgttcgaccacaaagagctagagctaataatc
ggcggactggggaagatagacctggcggactggaaggccaacacccggctgaagcactgc
acgggggagagcaacgtggtgcggtggttctggcaggccgtggaggccttcagcgaggag
aggagagggcgcctcctgcagttcgtcacgggctccactcgggttcccctgcaggggttc
aaagcgctgcagggctctacaggttctgcaggaccgaggctcttcaccatccacctgata
gacgccaacacagagaacctaccgaaagctcacacgtgttttaacaggatagacatccct
ccctacgagtcgtacgagaaactttacgagaagctgctgacagccgtggaggagacgtgc
ggcttcgccgtggagtaa
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