Gambusia affinis (western mosquitofish): 122822279
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Entry
122822279 CDS
T07758
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122822279
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122822279
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
U-box type E3
122822279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-CCHC_2
zf-RING_5
zf-RING_2
zf-CCHC
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122822279
NCBI-ProteinID:
XP_043956753
LinkDB
All DBs
Position
LG19:complement(7899452..7917014)
Genome browser
AA seq
1666 aa
AA seq
DB search
MAHIHYKFSSKLSYDTVVFDGPNISLTDLKKQIMGREKLRAGDCDLQIINAQTKEEFTED
GGHIPKGSSVIVRRIPLIGVKSSSNSKTNHKERSDVQIPKAFGSHRAISESSSTRALSFF
SKMQLANLAEADVSEEDKIRVMMNQSSCEMMKMNSKLGPTLPENYACYRCGNSGHHIRNC
PGSGDKNFEAPPRIKKSTGIPRSFMVEVDDPNIKGVMLTSCGRYAIPAIDAEAYAVGKKE
KPPFIPQEQPKCEEKEEPIPDELLCLICHDLLSDAVVIPCCGNSYCDDCIRTALLESETH
VCPTCGQSDVSPDTLIANKFLRQAVNNFKKERGSGKIQRTSLSQNTTPKPSPVPTLTAST
LQNKTKKPLQSPCTEQESMVNKPKPEKSPLLSQSAEGRPATPEPSAVENPSESTSTQPEQ
SLGVTSNNEEPEKTPDDLEAVALSGPASNKDLPDAPSQLIPLVNSVEGTEQLQTICVKQS
QPSSDSTTRPPGSSTSRDSIMSTYPAGSLTESNSEQHRTRSSSSSYSSLQTTPSPLFRSP
PFHTFVPTHQPLSSYLPGYPPTTPAWKLPIPPGAPLPSLCSSTTSSIPVLIPKEWYRFQR
KKKERSPHKRSFSHSVSKSSKSKSSRSYSGSSSRSESRSRSRSRHRSPHSSHRAFHSHSN
PSRSFGYKRPRSPTPSSSSSPLSSSHSRSKSSSDHSQKNRHHSKRSGLSTHGSKRRGERP
AREARKSSGLKGLSDTSCLELERQCYLQWKKEYQEWYDKYFSNYISQFHHLPFPPPPPPP
PLFSQDSFYLKQEGESVRKGDGSPTSEDSNYSGSPPSNSSNDRHSPICHLSSDSCSSPKV
NDDHFSPSRCSNDRPSTPSEVQVQLTDNMKESLERDSSLPDSLTKSREEASRQKAKTDDN
PQTKTKVEDCSTRRNEEKKKKPKKSPSSDSSGSTNVLRQDKRRRKTEPNSCEDDSLLRHK
GTTGDSLKSIQPLLKPNQPLHKEKKEKPKDKTKLETQQEPRKDKGSNSCQNRERKCKTKP
STDSNMSEVHQHPEGSKTSDSKSEQDKKRQKQDEERNKKHKDLPTKTKSSKCLQPKVAEG
PKSLESESLKSSERRVQSTEEKRKEREASPLAKKDIWEGGGKVMSQKKISININLDGKSK
EEKTKQNSSGLEICTGERTELSGVTEEKATEEGTKTESKEKRESSPGVKSQEKILSLLKD
IRETGNKATSSVNKKDVSMKIPKRDEKDGGEKKREDDFDLWHCALEGVEDREQRTGKEDR
KAEREKDGCGGHKNTLPQLEKGGAGRGNRVEAQKEDNAVRSSSQRSKTKIHRQNETLKHS
SKASLKSSRGAEGSLEATMAGGKLLEEKPNDQAEVTQNEPTQPNLLVPHSKREKTEKDVT
KGEVKATLPQASETTTDVESVEDNEQKSLRSTERARDRNRVTVGGRDQEKERNSASSGSH
SSVAPSCGSERERDRERPNERQREGERSKPGVREEERRRDWDAPVSKRTAFNSVSKDTEW
RDLLREGDRRSSCYSRKSPRSTYLPDQNVAKRHRDVSLDINSQNKDRFYDYSYPRQSADY
GYKDRPPGSQHSPPAYSHCRDRGTQPPAGSQRGFTTWEFMQSKNRNEERMQKAEKPGKER
KAAGNEEGGWSRREENAQRLDERRRSSSSSSSSVYSSASRRSSRDE
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggctcatattcattataagttttcctccaaactcagctacgacacggtggtttttgat
gggccgaacatctcgctgactgacttgaagaagcagattatgggcagggagaagctcaga
gccggggactgcgacctgcagatcataaacgcacaaaccaaagaagagttcactgaagat
ggtggtcacatccccaaaggctcctctgtcatagtcaggagaattcccctcattggagta
aagtccagctcaaatagcaagaccaaccacaaagaaagatcagacgtccagattcccaaa
gcctttggatcccatagagcaatcagtgagtccagctctaccagagctttgtcatttttc
tccaagatgcagttggctaacttggctgaagcggatgtctcagaagaggataagatcaga
gttatgatgaatcagtccagctgtgaaatgatgaagatgaactcaaagcttggccctacc
cttccagaaaactacgcctgttatcggtgtgggaacagtggacaccatatcaggaactgc
ccagggagtggggataaaaattttgaggctcctccgaggataaagaagagcacaggaatc
cctcgatccttcatggttgaggtggacgatcctaatattaagggagtcatgctgaccagt
tgtggacgttacgcaattcctgccatagatgctgaagcgtatgctgttggtaagaaggag
aagcctccttttattccacaggagcaacctaagtgtgaagaaaaggaagaacccatacct
gatgaactcctctgtttaatttgtcatgacttgctgagtgacgctgtggtcataccctgc
tgtggaaatagctactgtgacgattgtattcgaactgccttgcttgagtcggagacccat
gtttgccctacatgtggccaatcagacgtctcccctgataccttgattgccaataaattt
cttagacaggctgtgaataactttaaaaaagaacgaggctcgggcaaaatccagagaacg
tctttgtctcagaacactaccccaaagccgagccccgtccccactctgaccgcttccacc
cttcagaacaagaccaagaaacctctccagtcaccctgcactgagcaggagtcgatggtg
aacaagcctaaaccagaaaaatccccgctcttgtcacaaagcgccgaaggccgcccagca
actccagaaccttcagctgttgagaacccctctgagagcacgtccacccagcctgagcaa
agccttggagtgacatccaacaatgaggaaccagaaaagacgccggatgatttagaagct
gttgctctatctggcccggcttctaataaagatttgcctgatgctccctcccagctgatc
ccattagtaaactctgtggagggaacagaacagcttcagactatatgtgtcaaacaaagc
caaccgtcttctgattcaaccacaagaccccctgggtcatcaacctccagggacagcatc
atgtccacttatcctgctggaagcctgactgaatcgaactcagagcagcacagaactcgc
tcctcttcatcgtcatactcttcactgcagaccacaccttcgcctctgtttcgctcgccg
ccctttcacacatttgttccaacccaccagcctctcagcagctacctccctggatacccg
ccgaccacacccgcctggaagcttccaatcccacctggagccccgctcccatccctctgc
tcctccaccacatcatctatccccgttctaatccccaaggagtggtacaggtttcagagg
aagaaaaaagagaggtcgcctcacaaacggtccttttctcactctgtttcaaagtcctcc
aaatccaaatcgtcccgctcctactctggatcatccagtcgctctgaatcccgctcccgc
tccagatcaaggcatcgctctccccactcaagtcacagagccttccacagccactccaac
ccctccaggtcttttggctacaaacggcctcgttcgcccacaccgtcctcgtcttcttca
cctctgagtagttcccattctagatccaagtcgtcctcggaccacagccagaagaaccgc
caccacagcaagcgttcgggtttgagcacccacggctcaaagaggcgcggggagcgcccg
gccagggaagcaagaaagtcttcaggccttaagggtttgagtgacacgagttgcctggag
ctggagaggcagtgctaccttcagtggaagaaggagtaccaagaatggtatgataaatac
ttcagtaactatatcagccagtttcaccatctgccttttccgcccccgcctccaccgcca
ccactgtttagtcaggactctttctacctaaagcaagagggagagtcggtgaggaagggc
gacggctcacctacatctgaggactctaattacagtggctctcctccttctaattcctca
aatgaccgtcactccccgatatgtcacctctcaagtgacagctgttcatcccctaaagtc
aacgacgaccatttttcaccctctcgttgttccaatgacagaccctccacgccatcagaa
gtccaggttcagctgacggacaacatgaaggagagcctggagagggatagcagtctacca
gactctctaacaaagagcagagaggaagcaagtcgacaaaaagcaaaaacagatgacaat
ccacaaactaagacaaaggtcgaagactgcagcacccggagaaatgaggagaagaagaaa
aaaccaaagaagtcgccatcttctgactcttctggctccacaaatgttctcaggcaagac
aagaggaggcgcaaaactgaaccaaacagctgcgaggatgactcactgctacggcacaaa
gggactaccggcgactccttaaaatcaatccagcctcttctaaaaccaaatcaacctcta
cacaaagaaaagaaggaaaaacccaaagacaaaactaaattagaaacacagcaagagcct
agaaaggacaaaggttcaaactcttgtcaaaacagagagagaaaatgcaaaacaaaaccc
agcacagattcaaatatgtcagaagtgcaccagcaccccgaaggcagcaagacttccgac
tcaaaatcagagcaggacaaaaagagacagaaacaggatgaggagagaaataaaaaacac
aaggatcttcctactaagactaaaagtagcaaatgcctccaacctaaagttgcagaagga
cccaaaagccttgaaagtgaatccctgaagtcgtctgagagacgagtgcaaagtactgag
gagaagaggaaagagagagaagcatcacctctggctaaaaaagacatctgggaaggaggg
ggaaaggtaatgtctcagaagaagataagtatcaatataaacttggatgggaaaagcaag
gaggagaagaccaaacagaactcttctggtttggagatctgtactggcgagaggacagag
ctgtcaggagttacagaggagaaggctacggaagaaggtacaaaaactgaatcaaaagaa
aagagagaatcaagccctggagttaagtcacaggagaaaatattaagtctattaaaagat
attagagagacaggaaataaagccacctctagtgttaacaagaaggatgtgtctatgaaa
atccctaaacgggacgaaaaggacgggggggagaagaagagagaggatgactttgattta
tggcactgtgcacttgaaggagtggaggacagggagcaaagaacaggaaaagaagacaga
aaggcagagagggaaaaagatggctgtggaggtcacaagaataccctacctcagctagag
aaaggtggtgcaggcagaggaaaccgagtcgaagcgcagaaagaagacaacgccgtgaga
tcaagctcacagagaagcaaaacaaaaatccaccgacagaatgagactttaaagcacagc
agcaaagcctctttaaagagcagccgtggtgctgaaggcagcctggaggcgacgatggcg
gggggaaaacttctggaagagaaaccaaacgaccaagctgaagtcacacagaatgaaccc
acacagccgaatctactggtacctcactccaagcgggagaaaactgaaaaagatgtgaca
aagggagaagttaaggccactctgcctcaggcgtcagagacgacaaccgacgtcgagtca
gtggaagacaatgaacagaagagtctcagatcaacggagagagcgagagacaggaacagg
gtgaccgtgggaggcagagaccaggagaaggagagaaactctgcctcttctgggtcacac
tctagtgtggctccctcttgtggcagtgagagagagagggacagagagagacctaatgaa
agacaaagagagggtgagaggtcaaaaccaggagtgagggaagaggaaaggagaagagat
tgggatgccccggtgtcaaagagaaccgcgttcaactctgtttcaaaagatacggagtgg
agagacctgctgagagagggtgaccggaggtcttcctgttatagcagaaagtctcccaga
tccacctacctgcctgatcaaaatgtagctaaaagacacagagatgtatccttggatatt
aatagtcaaaacaaagaccgtttctacgactacagttatccccgtcaatctgcggactac
ggctataaagacagacctcctgggtctcaacactcgccacctgcttacagccactgtagg
gacagaggcacacagccacctgcaggctctcaaagaggctttaccacctgggaattcatg
caaagcaaaaacagaaatgaggaaaggatgcagaaagcagagaaaccgggaaaggagagg
aaagctgctggaaatgaggaaggagggtggagtcggagggaggaaaacgcccagagactg
gacgagcgacgcagatccagcagcagtagcagcagcagcgtctattcctcagcaagccgc
aggagcagcagggacgaatag
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