Gambusia affinis (western mosquitofish): 122822455
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Entry
122822455 CDS
T07758
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122822455 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122822455 (nup85)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122822455 (nup85)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122822455 (nup85)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122822455 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
122822455
NCBI-ProteinID:
XP_043957075
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Position
LG19:11116813..11123547
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AA seq
654 aa
AA seq
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MEEVDVEPTVTNIPGIRHGKHMGFAWGPGDILVYETHFKPSGNTLSGPGGSFIHKVRKDE
DINSPILRKLFNESHHIFVGLQTINDDLPSKSKRPQFVSISRNYRSVIRACMEELQQVAV
STRDTEKGTQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKA
KDVLQSDSPAEHHNYWDVVVSYVLQGRLEEARQMLVKQATLQPASRNMYKLMDNLLSKMP
FYNPSGTQTLTEFDVKWRNWHEEVDRYLKDNTFASNHHLELICKILVGDEDTLLEQKELL
GTWYHFLVTRLLYSHPTVKPTDLHYYAQSCLTMFLDSRSVQEPLDSILLAAFEFDIYLVI
KDCSIVLNNWWFVAHLTDLLDHCKLLQSHNLNFGSNMREFLLLEYASGLFTHHSLWQCAV
DYFDHCPELGRACLELQIERVPLDTERKALKVLRICEERQMSEQVRSICKIMAMRALRNN
RLGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKY
REFHKLYGEKRFKEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSADQTYELM
YCLEELTSSLDTATSGGDRPMQEEDVEQTKVELLRLSLARNLAMAIVKEGTMET
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagacgtcgagccgacggtcactaatataccaggaatcagacatgggaag
catatggggtttgcctgggggcctggagatatccttgtttatgagacacattttaaacct
tcaggtaatacactgtcaggcccaggtggctccttcatccacaaagtcaggaaagatgag
gacataaattctcctattttacgcaaactgtttaatgagtcgcatcacatcttcgttgga
ttgcagacaatcaacgacgacctccccagcaagagcaaaagaccccaattcgtcagcatc
agtagaaactacagatctgtgattcgggcgtgtatggaggagcttcagcaagttgcagtt
tctacaagagatacagaaaaaggcacacaatatggaaatcaggtttctattcttttggcc
attgaactgatctggaatctgtgtgaagtgctttttatcgacgctgctcctgctggctcc
ctcttgcttcatcttctggactgggtaaggttacacaaggctgatgttgatgagaaggcc
aaggatgtgctgcagagcgacagtcctgcagagcaccacaactactgggatgtggtggtg
agttatgttctgcagggcaggttggaagaagccagacagatgctggtgaagcaggccaca
ctacagccagcctccaggaacatgtacaagctgatggataacttactcagtaaaatgcct
ttttacaaccctagcggcacgcagacactgacggagtttgatgtgaagtggaggaactgg
catgaggaggtggatcgctacctcaaggacaacacttttgccagcaaccaccacctggag
ctcatctgtaagatcctggtgggtgatgaagacactctgttggagcagaaggagctgctc
ggcacctggtatcacttccttgtgactcggctgctctacagccaccccacagtgaaaccg
actgacttgcattactatgcacagtcgtgcctgacgatgttcctggactccaggagcgtc
caggagcctctagacagcatcctactggccgcctttgagtttgacatttatctggtcatc
aaggactgcagcatcgttctcaacaactggtggtttgtggctcatttgacagacttgctg
gatcactgcaaactcctccagtctcataatctaaactttgggtccaatatgagggagttc
ctcctgttagagtatgcctcaggtttattcactcatcacagtctttggcagtgcgctgtg
gattactttgaccactgtccggagttggggcgagcttgcctcgagctgcagatcgagcgt
gtgccgttagacacggaacggaaagcactcaaagtgctccggatttgtgaagagaggcag
atgtcagagcaagtgcggagtatctgtaagataatggctatgagagctctgaggaacaac
agactgggctccgctctgtcctggagcatcagggccaaagacgccgcctttgccaccctc
atttctgagaggttcctacaggattactgtgccaaagggactttttctgacttggatctg
attgataatttgggtccagcaatgctactcagcgacaggctcacattccttgggaagtac
agggagttccacaaactgtacggggagaaacgcttcaaggaggccgcaaagctgctgctc
tcccttatgacggcaaagattgctccccgaagcttctggatgactctgctgaccgacgct
ctgccgctgctggagcagaaggaggtgatcttctctgctgaccaaacctatgagttgatg
tactgtttagaggaactgacctcctcactagacactgcaacttctggtggagacagacca
atgcaggaggaagatgtggagcagaccaaagtggagctcctgagactctctctggccagg
aatctggccatggctatcgtcaaagaaggaaccatggagacataa
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