Gambusia affinis (western mosquitofish): 122822480
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Entry
122822480 CDS
T07758
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122822480
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122822480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122822480
NCBI-ProteinID:
XP_043957112
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All DBs
Position
LG19:11608143..11668463
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AA seq
2262 aa
AA seq
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MQSFRERNSGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGHNRS
GYEAMSNTANVPTGGAAGIGGPKDCYSQQNYSGYPGSTGGSGNGNGSSSASQAKKSFRGS
KVPPPNPSQHLQGPGGYSNHMAPGNYSAQYMSEGHLQQKWEDPAQLAQYEQEMVGRLEAG
ASPAPGSSQYIDSNMLGHSQTPCHQPSTPSYTSPHHQPHPPNPAPSPLMYPQSHLHYPQP
SPSPSPYMEKCSPMPHCYKGYNIPPNSQYSRQLSSHSSLKQGAYRSTQNSYGYQQSTPRG
YEQQTSLQAMTNPQEPHPKYQHYSQPQQNYCLSELPVRSPEQYYQTCSPSSSHSPARSVG
RSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAGMQDQASTNTMLMPPRSHPSP
NISHTASHSYTSTPQAPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSEALV
ANKKGSKRSSGGSNSSTGSGASTKKGEEYKSPPYPDSGGMVGGAMHEPYSTPQHQPLPME
LHEGGYSSSSDEPLDRGFYYFGQGRSPAQAHNNTQLSLDTASSCSIASPDDMSTRSGDSG
LHNLTPDPIRCTAGQGGDGMNTPVKSIGDERSPTSITIPSPMKQESDSPSDIQHINQPVK
ENFEESAWTEKPAGKEEEAMEKTLDFISKTDSSNPTEKQEKWTDEEKCPNFYSKINTNMA
EKGYCYEDSMYQEVQSKYDSDARDSVEQSPADLSDSSNKDHFSQEMKSGVFKSESPTASE
SSVKTLPFISRGDLEQDPYSTEKDDSSANTSPTPQTEVLEESSCDKKESRTQENDKDIVE
DREEDEINEDEKEEIEKSSLSQLLSKDIREEAEEEKERQSLTEEHINDEDIQMSPSEDLC
SRTEFHNLALNTDSDFAGGPGHLNAAAATTATDVSTRESAIGDTAPQPQSAMPVFSALND
KAAPPAQARDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPQKGDDDIEPGISCS
SAVTPLAKPEPMVPSAQPRTYGRKHVRGRRRIIHSGVALRRQLSLKKEEEKEDKETNSSQ
QKSSMAPSKTILFSDQTNLAHQDSMVSQTPKMLTDGFQSRMCTRSFNAPDMQAKVEPNVK
RKPGPKPGSKPGSKPSAKPGPKPGAKPGLKSGPKPGPKPGKKTGQKPASQESEVPLKLET
IVRQKPGPKPGSKSGPKPGPKPVLRPGPKPGLKPGEVLPPTEAAPIKAPVGRPRGSISKA
KLMDREDPRQVPEMQSRTRKALKHATLQYNQDGKSPTEEKRSLPEIKVQERENNNMVLRS
RKLSQDKLTKEKERGGEDIQTSTSTENKISDISLKVKEVIVVKKLLTPNPDAMITTNVSL
HSPVPLAKPALSEESKEKTLSILKHTSSPDISTPPVKKKRGPKPKLRNLPSQSVLFEEIL
PARKDKSVRGPRRKRGPPRKASLVSASTKDAPPNSSGSATSDMPVVPPQCPTKTKVLPPR
KGRGQKYEAMVQKITSPSSKKHFPATQQDSSLSEDFTSKAFSEFVFKEGEAFIQINNTET
LEFTKEEMKEQEEAMTMEDVSQLGGKHELSREESAKDIVRPLVEEEITNKNYGRQEKGKV
ETKMEVADNKALSSTETSLDVGTLDERTQQTSKSDATKSVRTKRKRWAMVESTDASVVAL
EADSLIITTPRLAKQRAIKNNHEMHLKQRRKKRKGEANLEETETVDELNTTETPEPVERI
EEKVTATESTKYTEPLPTSEDKFTETPQAISAELIQKPRRGRKPSANPTKQKRSQASMEH
APGKPVKIHKKPGPKPGMKDAIEVIEAVVRAAGCEQDQKEERAKEEREKRERENIESEET
SIVGPVVTVTEKQMEFISVKRIRRRPINRNSKLSFCPYVRINNSRDFSSWCAIVNKPDDA
VVFQRRRKKGILRMRNPFTVAKVVPHTAAMQLGPLVNTNLSDMRLMCCLCGKPPNYKDLG
DLCGPYYTEDSIPRKILTITHTQLFREDGSKTHENDSNSSEEPGTSSKTEDRVNSEKEGN
TEATTEEAGNSRHHHRHYRRLLRPERPCQEGGPRRVTLRERFRRMKQLQNLYTATSKDQE
GNESMFQKLQMEAVAKEHWAHENCTIWTKGIIMVAGRLYGLKEAANKSAQTSCHKCQISG
ASLSCCWRGCSYKYHYICAKEIGCTFHEDDFSIKCPKHEPSWSAEFISSFMQQPRFDVFC
TFLQKKLQFSPLRVAWRLSPPASQLPEAFSGSNQRKNFKKGS
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgtgagcgcaacagtggttaccacagcaaccaaccctgctatcagcag
gagccccatgaattatctcgcctggagacctaccggcaacacccacatcatccccatccg
cagcatccacacccaggccctggtcctcatccaggccctggccccgggcacaacaggtca
ggctatgaggctatgtctaacacagcaaatgtgcccacaggtggagcagctggaattgga
ggacccaaggactgctacagccagcaaaactattctgggtacccaggaagtactggaggc
agtggaaatggaaatgggagctcatcagcttcacaggcaaaaaaatcctttagaggaagc
aaagttcccccaccaaaccccagtcaacacttgcagggccctggaggctatagcaatcat
atggccccaggaaattattccgcccagtatatgagcgagggccatctccagcagaaatgg
gaggaccctgcacagttagcacagtatgaacaggagatggtggggcgactggaggctggt
gcttcccctgcacctggatcctcccagtacatagactcaaacatgttggggcattcccaa
accccatgccaccagccttctaccccaagttatacaagtccacaccaccagcctcaccct
cctaatcctgctccttcacctctcatgtatccccaaagtcatctacactatcctcagccc
tccccctctccatccccatacatggaaaaatgcagtcccatgccccattgttataaaggc
tacaacatacctccaaattctcagtatagcagacagctaagtagtcatagcagtttgaag
cagggggcttacaggtcaacccagaacagctatgggtaccagcagtcaacacccagaggt
tatgagcagcagacatctttacaggcaatgaccaacccccaagaaccccaccctaaatac
caacactatagccaaccccaacaaaattactgtctgtcagagctccctgtcagatctcca
gaacagtattatcagacttgcagcccctcctcaagtcattcccctgctcgctctgtcgga
cgttcaccctcatacagttccaccccttcaccactgatgactaatccagaatcattccag
tatggccaaccaccaatgacacctggggcagcctcatcatcatcatcctcttcagctggt
atgcaagatcaagccagcacaaacaccatgctaatgcccccacggtcccacccttcaccc
aacatatcccacacagcatcccacagctacacttcaacaccacaagcgcccacaatgaaa
gagcgcttctcggagaagttgttatcaaaccccagcttgtggagcctaaacgctctcacc
tctcaggtggagaatatctccaataatgttcaacagctcctgctttcagaagccctggtt
gcaaacaagaagggcagcaagcgcagcagtggtgggagcaacagcagcactggaagtggg
gcctccaccaagaaaggtgaagaatacaaaagccctccatatccagacagtggtggcatg
gtgggtggggccatgcatgaaccttactctaccccacagcaccaaccattgcctatggaa
ctccatgagggtggctactccagcagtagtgatgaaccattggacagaggtttctattac
tttggccagggtagaagtccagcccaggcccacaacaacacacaactcagcctggacaca
gcctcctcttgctccattgcctctccagatgatatgtctactaggtctggggactcaggg
ttgcacaaccttacccctgatcctataagatgcacggcagggcaaggaggagatggcatg
aataccccagtgaagagcattggtgatgagagatctccaacaagcattacaataccaagt
cctatgaaacaagaaagtgattccccatcagacatacaacacatcaatcagcctgtaaaa
gagaactttgaagagtcagcttggactgaaaaacctgctggaaaagaagaggaagcaatg
gaaaagactcttgattttataagtaaaacagactcaagcaaccctacagagaagcaagag
aaatggacagatgaggaaaaatgcccaaatttctacagcaaaataaacactaatatggca
gaaaaaggctattgctatgaagactcaatgtaccaagaggtccagagcaaatatgactct
gatgcaagagattcagttgaacagtccccagctgatctctctgattccagtaacaaagat
cactttagtcaagagatgaagtcaggggtattcaagtctgaatctccaactgcatctgag
agttctgtgaaaacgttgccattcatttcaagaggagaccttgagcaggatccatattcc
acagagaaagatgacagttcagcaaatacctctccaaccccacaaactgaagtcctggaa
gagtctagttgtgacaagaaggagagcagaacacaggagaatgacaaagacatagtagaa
gatagggaagaggatgagataaatgaagatgagaaagaagaaattgaaaaaagttctctt
tcacagcttttgtctaaagatattagggaggaagcagaggaggagaaagaaagacagtca
ttaactgaagagcacataaatgacgaagacatccaaatgagtccctctgaagatctctgc
agcagaacagaattccacaatttagctcttaacactgacagtgattttgcagggggaccc
ggtcatcttaatgcagcagcagcaacgacagcaacagatgtttcaacaagggagtcagcc
atcggcgacacagcacctcagccacagtctgctatgccagtcttctctgctctcaatgat
aaggcagctcctcctgcccaggctagagatcatattgatcacagcgatgctaaggtcctg
gagccggactctcctcagctgccagggaagtcaatacttccctctgccccttcctgggct
gacactccaccatctcctcaaaaaggggatgatgatatagaaccaggcataagttgttcc
agtgctgtgacaccactagctaaaccagagcctatggttccatctgctcagccaaggaca
tatgggcgtaagcatgttaggggtagaaggagaatcatacattcaggtgtggcattaagg
cgacaactgagtttgaagaaggaggaagaaaaggaggacaaagaaacaaattcctctcag
caaaaatcaagcatggctccaagcaagactattttattctcagatcaaactaaccttgct
catcaggattctatggtgagccagactcctaaaatgctgacagatggttttcaatccaga
atgtgcactcgctcttttaatgcaccagatatgcaagcaaaagttgaacctaatgtgaag
agaaaaccaggcccaaaacctggatctaagccagggtcaaaacccagtgcaaaaccaggg
cctaagccaggtgctaagcctggtctaaagtcagggccaaaacctggaccaaaacctggg
aaaaagacaggacaaaagcctgcatcacaggaatcagaagtgccactgaaacttgaaact
attgtaaggcaaaaaccagggccaaagccaggttcaaaatctggaccaaaacctggacca
aaaccagtcctaagaccaggtccaaaacctggactcaagcctggtgaggttttgcctcct
accgaggctgctcccatcaaagctccagttggtcgcccaaggggctcaatttcaaaagca
aaattgatggaccgggaagatccaagacaagtcccagaaatgcaaagcaggaccaggaaa
gctctaaaacatgcaacactgcaatataaccaagacggaaaatctccaacagaggaaaag
cgatctctcccagaaataaaggtacaagaaagggaaaacaacaatatggtcttaagatcc
agaaaactctcacaggataagctaacgaaagaaaaggaaaggggaggggaagatattcaa
acttcaacatcaacagaaaataaaatcagcgatatctctctaaaagttaaagaggtcata
gttgtgaaaaaactactaactccaaatcctgatgccatgataacaaccaatgtttcccta
cactcacctgtaccacttgcaaagccagccctctctgaagaatctaaagaaaagacatta
tcaatactaaagcacacatctagcccagacatttccacaccacctgtaaaaaagaagaga
ggtccaaagcccaaactaagaaacttaccatctcagtcagtcctgtttgaagagattcta
ccagcacgcaaagacaaaagtgtccgaggccccagaagaaagcgaggaccacccaggaaa
gcttctctggtcagtgcctcaacaaaagatgcgcctcctaacagcagtggatctgccacc
agtgacatgcctgtggtgcctccccagtgccccaccaaaacaaaagttctccctccacgc
aaaggcagagggcagaaatatgaggcaatggtacagaagattacatctcccagctcaaaa
aaacacttcccagctacgcaacaggacagtagtctaagtgaggactttacgtcaaaggct
ttttctgaatttgtctttaaggaaggtgaggcttttattcaaataaataacacagagaca
ttagagtttacaaaggaggaaatgaaagagcaagaagaagcaatgacaatggaagatgta
tcacaactaggtggcaagcatgagttaagccgagaagaatcagcaaaagatatagtaaga
ccattagtggaagaagagattacaaataagaattacggaagacaagaaaaaggtaaagta
gaaaccaagatggaggttgctgacaataaggctttgtcttcaacagagacatcattagat
gttggaactctagatgagaggacacaacagacttccaagagtgatgccacaaagtctgtc
agaacgaagagaaagagatgggccatggtggaaagtacagatgcatcagtggtagctttg
gaagcagacagcctcattattacaacaccaagacttgctaaacagagagctattaagaac
aaccatgaaatgcaccttaaacagaggaggaagaagagaaagggtgaagccaatttagag
gaaaccgagacagtagatgagctcaacacaacagaaacaccagaacctgtggagagaata
gaggaaaaagtcacggccacagagtccacaaagtacacggaacctctaccaactagcgag
gataaattcacagaaaccccacaagctatctctgcagaacttattcaaaaacctcgaaga
ggccgaaaaccatccgcaaacccaactaaacaaaaaagaagccaagcctcaatggagcac
gctcctgggaagccagtgaagatccacaaaaaacctgggccaaaacctggaatgaaagat
gccattgaggtaattgaggcagttgtaagggcagctggatgtgagcaggaccaaaaagag
gaaagagcaaaagaagaaagagaaaaaagagaacgagagaatatagaaagtgaagagact
agtattgtgggtcctgtggtgactgttacagaaaaacagatggagttcatctctgtgaaa
agaatcagaaggagaccaatcaacaggaattccaaactatctttttgtccttatgtacgg
atcaacaactctagagacttttcttcttggtgtgccatagtcaacaagcctgacgatgct
gttgtatttcagagacggagaaaaaagggcatacttagaatgaggaatcctttcacagtt
gctaaagtagtgccacacactgctgccatgcaactaggaccattggtaaacacaaatcta
tctgacatgcgtcttatgtgttgcttgtgtgggaaaccaccaaactacaaagacctgggt
gatttgtgtggaccatactacacagaagatagtattccacggaaaattttgactatcaca
catacgcaactcttcagggaagatggcagcaagacccacgagaatgacagtaacagcagt
gaagaaccagggacttcctcgaagactgaagatagagtgaactcagaaaaggagggaaat
acagaagctaccactgaagaggctggaaacagcaggcaccatcaccggcactacagacgg
ctactgagaccggaaagaccgtgtcaggaaggtggtccgagaagagttaccctcagagag
cgattcaggagaatgaagcagctccagaatctctacacggccacttcaaaagaccaagag
ggcaatgaaagcatgttccaaaagctacaaatggaggcagtggccaaggagcactgggct
catgaaaactgtaccatctggaccaaggggataattatggtagctggaaggctatatgga
ctgaaggaagctgccaacaagtcagctcaaacgagctgtcacaagtgccagatttcagga
gcgtctctcagctgctgttggagaggctgctcttataagtaccactacatctgcgccaaa
gagataggctgcacatttcatgaggatgatttttccatcaaatgcccaaaacatgagcca
agctggtcagctgaattcatctcctctttcatgcagcagcctcgctttgatgttttctgc
acatttctgcagaaaaagcttcaattctcaccgctcagagtggcctggaggctctctcca
cctgcatcacagctgcctgaagctttttctggttcaaaccaaaggaagaattttaaaaaa
gggtcataa
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