Gambusia affinis (western mosquitofish): 122822519
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Entry
122822519 CDS
T07758
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
gaf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122822519 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122822519 (grin2ca)
04082 Neuroactive ligand signaling
122822519 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122822519 (grin2ca)
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122822519 (grin2ca)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
122822519
NCBI-ProteinID:
XP_043957183
LinkDB
All DBs
Position
LG19:23103501..23162870
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AA seq
1416 aa
AA seq
DB search
MGLRLGSWSDSLWWPPPLPLLLLLLLFCTTPSSLGRPFGFPVPSVNVAVVFSGPAYQTEI
KGRLSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQ
ILDFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFV
VITSLYPGYEAYVDYIKSFTDTSYFMWDLQDVLSFDMSADSTNDIRARRLLQQIDAQVLL
VYCSHEEAQYLFSLATEVGLIGPGYIWIIPSMAVGNPDIPPPDSFPVGLISIITDRWRMS
LRKRVRDGVAIVVKGVQSFRKQRGFIPEGHSDCHNPVKQSAINDTLFRHMLNVTWEHNDF
SFNSNGYLVNPAMIVITLDRERQWDKVGTYEMGILQMRYPVWPRFGSYLEPVSDYRHLTV
ATLEERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKK
LSRTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSV
PFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNR
SLVSAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYT
ANLAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMV
KYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQ
KDSRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLV
AMGLSLLVFAWEHLLYWKLRHSVHKSDRLDFLLAISRGIYSCFNGVEQSDRNGSLQSPDV
TTNYTQANMLKMLRTAKDMVSSARVENSLDSATKTIENWSRRGADNVRAGLPPRVTTTDV
THSRLPYISSITDNHSPYPQRAITPTFPVHYGDTSTQPLLEKPRVVTRPTPLRYTLPTRS
SQHLLERTLPISSLSSPHIAMRDPTPSGTSNPHHSSRLYVENQGRHPASPFVSYREFQVP
DIYVEHKGPLRRKFSYPPDCVSRRRRSFSYLLNNPEQRVRVDYDEPRSCFAELRANHLLN
NQPPDGMAMACTPGHYPGSSTSCNSCMKSYLEPQMDDIPLLGKDKLNRRASFLKATWGND
RIRQVDETKPSTSTAPSTRTDMPDLFPQVVGPNPKPHRLYGSLGHNLSCYPLAAEPAYLD
PAHMGSYPYKQKIKYADSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVY
VGPLPQGPSQFYNSSKDMCHLFPCTSHCPENTAMLSRMANRPVVYHNNMFGPYDAPKRED
LGSGSRDRRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgggccttcgtctgggcagttggagtgactccctgtggtggccgccaccgctgccgctg
ttgctgctgctgctgctgttctgcacaaccccctcctctttgggtcggcccttcgggttc
cccgtgccctctgtgaacgtagcggtggtgttcagcggcccggcctaccagacggagata
aagggccgtttgagccgggaaaacttcatggacctgccgctggaggtgaaccccatcact
gtgctggtcaacaacactaacccacgcgctctgctcacccggatctgcgacaccctgtca
actaaccgggtccacggcgtggtgtttgaggacaatgttggctctgaggctgtggcacag
attctggacttcatctccacacagacagcagtgcccattgtgggtatcagcggcggctct
gcagtggtcctgccttacaagggtgaaggttccaacttcctccaactgggttcctccatc
gagcagcagattaacggcatgttcaaggtgatggaggagtacaactgggacagctttgtg
gtcataaccagcctgtacccgggttatgaagcctacgtggattatatcaagtccttcaca
gacaccagctacttcatgtgggacctgcaggacgtgttgtccttcgacatgtcggctgac
agcacaaacgacatacgagctcggaggctgctgcagcagattgatgcccaggtcctgttg
gtctactgctcccacgaagaggcacagtaccttttttcattagcaaccgaagttggacta
ataggaccgggctacatctggattatccccagcatggccgtgggaaacccagacatcccg
ccacctgacagcttcccagtggggttgatcagcatcatcacagaccgctggaggatgagt
ctgaggaagagggtgcgggacggggtagctattgtggttaaaggggtccagagcttcagg
aagcagagaggcttcattcctgagggtcacagcgactgtcacaaccctgtcaaacaatct
gccatcaacgacacgctgttcagacacatgttgaatgtaacatgggagcacaatgatttc
tccttcaacagtaatggctacctggtgaacccagccatgatagtcatcactctggataga
gagagacagtgggacaaggtggggacgtacgagatgggaatcttgcagatgagatacccg
gtgtggccgcggtttggctcctacctagagccggtgtcagattacagacacctgactgtg
gctacactggaggagcggccctttgttattgtggaggcagtggaccctgtgactggtact
tgtgttagcaacactgtaccctgtcgacgacagtccaacaagacagaggctattgtgggt
cacactgagccatacaccaagttgtgctgtaaaggtttctgcatagacattctgaagaaa
ctctcacgcaccatcaagttctcctacgacctttacctggtcaccaacggcaagcacggc
aagctggtcagaggcatctggaacgggatgattggagaggtgttctacaaacgagcggac
atggctatcggctcactgaccataaacgaagagcgttcagaaatcattgatttttcggtg
ccatttgttgagacgggaataagtgtgatggtggctagaagtaacgggacagtctctcca
tcagcttttttagaaccatacagtccagcagtctgggtcatgatgttcgtcatgtgtctg
accgttgtggccatcacagtattcgtctttgaatactgcagtccagttgggtataaccgt
agcttggtcagtgccaaagatcccggaggtcccacattcactattggaaaatcagtttgg
ctgctgtggggaatcgtcttcaacaattcggttcctattgagaatccaaagggcaccacc
agtaagatcatggttctggtctgggctttctttgctgtcatcttcctggcttcgtacaca
gccaatctagctgcctttatgatccaggagcaatacatcgacaccgtttccggactgagt
gacaaaaagtttcaaaagccacaggagcagtatcctccgttccgctttggtaccgtccca
aatggcagcacggagcgcaacataaggagtaactaccccgagatgcactcccacatggtc
aaatacaaccaaaaaggagtagaggatgctctcaacagccttaaaacagggaaactggat
gcctttatctatgatgctgctgtgctgaattacatggctggcaaagacgaaggatgcaaa
ctggtaaccattggcagcgggaaagtgtttgctactactggttatggaattgctctgcag
aaggattcacgctggaaacgccccatcgacctggccctgctgcagttcctggctgatggt
gacacccaaaagttgcaaaccgtctggctcacaggtatctgtcgaaacgaaaagaaagaa
gtcatgagcagtaagctggacatcgacaacatggccggagttttttacatgctgcttgtc
gccatgggcctaagcctactggtatttgcctgggaacatctgctctactggaaacttcgc
cattcagttcacaaatcagaccgtctggactttctcctggctatcagtagaggcatctac
agctgctttaacggagtagagcaaagtgaccgcaatgggagtctgcagagtccagacgtc
accaccaactacactcaagccaacatgcttaagatgctgaggacagccaaggacatggtg
tcctctgccagagttgagaactctctcgatagcgccaccaaaacaatagaaaactggagc
agacgtggagccgacaatgtgcgagctggcctgcctcccagagttacaaccacagatgtg
acccacagccggctaccctatatctccagtataacagacaatcattccccctaccctcag
agggccattacaccaacgttcccagttcattacggggacacatccacccagccgcttcta
gagaagcccagggtggtaacccgacccactcctcttcggtacacgctgcctacacgcagc
agtcagcatctgttggagagaactttgcccatttccagtctcagcagcccacacatcgcc
atgagagatccaactccctctggaacgtccaatccccaccacagcagcaggctgtatgtg
gaaaaccagggccggcacccagcatccccttttgtttcctacagggagtttcaggtacct
gacatttatgtggagcacaagggacccctgcgcaggaagttcagctaccccccagactgt
gtaagccggagacggaggtcttttagctatctgcttaacaatccagagcaaagagtgaga
gtcgactacgatgaaccacggtcttgctttgctgagttgagagccaatcacctcctcaac
aaccagccccctgatggtatggccatggcctgcactccaggacactaccccggcagcagc
accagctgcaactcctgcatgaagtcttacctggagccacaaatggacgacatccccctc
ttaggaaaggacaagttaaatcgacgagcctcatttctcaaggccacgtggggaaatgat
agaatccgtcaggtagatgaaacaaagccttccacatccacagctccctccacccgaaca
gacatgcctgatttgtttccacaggtggtggggccaaatccaaagcctcacaggctgtac
ggtagtttagggcacaacctctcctgttaccccctggctgctgagccagcctacttagat
ccagcccatatgggttcttacccctacaagcaaaagataaagtacgctgactctacccgg
ctgccctcgtacagggaagctatcctgcaaaacgcagctgcactgcgccgctcctcctct
acggtggtgcacagacattattccacatacctgaactcgtacacagatttaccagtatat
gtggggcctctcccacaaggaccgtcccagttctacaacagctcaaaggacatgtgccac
ttgtttccgtgtaccagtcactgcccagaaaacacagcaatgctctctagaatggcgaac
agaccagtggtttaccacaacaacatgtttgggccttatgatgccccaaagcgagaggac
ttgggttcagggagccgagatcggaggcaagtccttgtggcgagaagagtcaacagtccc
tatgtgccaaagccctggggcagggtctccagtctggagtctgaggtctga
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