Gambusia affinis (western mosquitofish): 122822591
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Entry
122822591 CDS
T07758
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
gaf
Gambusia affinis (western mosquitofish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
122822591
NCBI-ProteinID:
XP_043957341
LinkDB
All DBs
Position
LG19:21075775..21167632
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AA seq
2431 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNSRHLYPGAEDEEEEEEEEEEEMEEDERDEDGEEEENGELE
GEEDDDDEEMVEEVRRGGIPRIGRGEGHRQSGKPAGRPGGDRQMRSGNPGHAANPYSANP
GPTHQAAANQQPRRLKERTANSVPSEDAHIAMMVFRIGIPDIKQTKCLRFNPDATVWKAK
QQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERPLRDYPQSFEKGVPYLEFRYKTRV
YKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFIDKGLDPNYQDPDTGETPLSLA
VQCEPGGGEAIRVLVDGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDYKDRR
GLTPLYHTVLTGGDTSCCETLLYHRAKLGIRDENGWDETHQACQNGNSQHLEHLLFYGAD
SSSQNASGNTALHICALYNKESCARILLYRGASKDMKNNSGQTPFQVAVMSGHFELGEII
KNHQDTDVVPFVESPKYAPQRRESTRSLAVPHPHPFLRANSDSSMNLPDWMAVPNAPSTN
IVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSQRRGPPPTSTTTTIQTAG
QRRRLYSAVPGRVFVATRSHSAQGEREISFSKGDRVKVLSVGEGGYWEGTVRGRTGWFPS
DCVEEVVLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGF
GFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVG
HRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGARKKIPQQSKRLSTPAIALRSKSMTSELE
EMVERAATPWKKKSEFESSQVSEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRGHGP
KRDRGRSFYGNEPSYADQPGMGMMSGLGLGYERGQYGPGHGPPHGIMRQKSIGVPEEEKQ
FLHPPAVKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGWRTKLSQQPSVSMSQSTSS
SAHYQPFSQPGHLSQGGRERAGGPTAGPAADHTTPYVHASAHTAQSRTASRKVAYTGEPV
GAGIGAGAGAGAKPAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRADRSTAGAGGPKG
GARRGKGPLVKQSKIEELRLGQGSLGSKDSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSV
EADVPTSGETGDTKTPHGPPPSTPAPQPPAPPSIPAPPPPSMPSIRAQDNLDFTSQFGAA
IVGAARRDRERFLEARRKSASFFMSAEEDLSLGMSEALGGVSRTQVSQQQLNAQPESSST
RLRPSKSIDEGMFSADTFIQHTRSMPPAFGLPEYSSTALDYQPKSVPADLYTAAGRQPAP
SANTTFIHPLTGKALDPTSPLGLALAARERALRDDSRIRRGTEHLFTRQMSSVVFPSSTV
TSQPVSSHTTQSSSSYLVTSSSLAATTPTVGRPPSPRILRGAGSTWGEEGGERERDGGGT
REGLRVRFSEDKTVHTHHYQSQPYQPSYKERERSRERERDHSRERDIRRAEQAAESAPPQ
PRRPSFLRMESQADAYMLSLTPPSPPPNITHQASGSTGSGMMVLPPPAPSVDADDEFVYA
DPLPPPLEFANSFDRGGSGYSQHAMLSNSLTHRQQQVPPPPPPPPPPPPPPPPPPPQKEH
YISGFPAHTPLPSPQAGDSTASSLTSYDSEVANLTQSAPSPSQTSPNPPPPSSPSTLQPA
MGLPPPPAVSPPPPPGAGFYHRPFSMSHHLYNSTHASGRSSPTPPQHTVAPPPAYRGPPA
PSSTAATSVPHRGTASHATTASCAATTTTAATTSSSTQLHQERTHPAHSTYSTTITGRTG
EHHRPHPTAKKGESQETVVDSGIEELDSRSSSDHHLDSILGLSGAGVRGDRLDRGERLGA
GGPGRIGGGAGETERGGADFLESYMSYLDGQTFEMQNATAAASTYPKTSRFREGSRTGDS
HRQTSTAPAAYHSHRQRDGQVEDDVEEGLGDDESGQDGYGMRDMQNMGRPTSPYFDRPRT
PEMRTLWGDGQMSGDMGSQSGSLLEGKKIYPPASSMKPSIITELSSKLQQRSKDSWSSHR
PLSRHRFSEDSASALSPPSVRSQSLSPISLSQPSLSPSPTPASQYPNWGRSPSPQPPAAS
QPPRSHSPVSPTSYSPYPTSPKHRPVYRNKALEFQFIPSRESRKAESHILQRRRAPSPLI
SQSERPKVAPPRPSSLPLLPTSPLYSAIYDLRGSITPPSPGNPLGDPYFSPSPPLFAPSG
APPPPNSTLVVSRSLSPTHFLSGTSSPPLHPHPPPTCLSYPHLPPPSPTKPFASKPLPYW
TKYDVADWLAYLNLSEHRDRFLDNEIDGTHLPSLTKEDYLDLGVTRVGHRMNIERALRSV
MDRLSSSPFPISVLSPREGQPERRRDDGSRS
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaac
agcagacatctctatcctggggcagaagacgaggaggaggaggaggaagaggaagaagaa
gagatggaagaggatgaacgcgacgaggacggggaggaagaggagaacggcgagctggaa
ggagaggaagacgacgatgacgaggagatggtggaggaggtcaggcgaggaggcatccct
cggatcgggagaggcgagggacacaggcagtcgggcaaaccggcaggacgacccggcggg
gatcgacagatgagatcaggaaacccgggacacgccgccaacccgtactcggccaatccc
ggacccacgcaccaagcagcagccaatcagcagccgaggaggctgaaggagcgcactgcc
aactcagtgccatctgaagacgcccacatcgccatgatggtgtttcgcatcggcatccca
gacataaagcaaacgaaatgtctgcggttcaaccccgacgccaccgtgtggaaggccaag
cagcaggtgctttgctctctgaccgaatcgctgcgagacgtgctgaactacggcctcttc
cagccggccacagacggacacgacgccaagttcctggaggaggagaggccgctcagagac
tacccacaatcctttgagaaaggggtgccatatttggagttccgctataaaaccagggtt
tacaaacagaccaatctggatgagaagcaactggccaagctgcacaccaaggcgagtctg
aagaaattcatggattatatccaaaccagcgctgtggacaagatggccaagttcatagac
aagggcctggatccaaactaccaggatcctgacactggtgagactcctctgtcgctggca
gtgcagtgcgagccaggtggaggagaggccatccgggtcctggtggacggaggcgctcac
atcgacttccgtgccaaagatggactcacgccgcttcacaaggctgttcgaggccaccgc
catacagccctgctggtcctgctctctctgggtgcatctccagactacaaggaccggcgg
gggttgaccccgctctaccacactgtgctaacagggggcgacacctcctgctgtgaaacg
ctgctgtaccaccgcgccaagctgggcatcagggacgaaaacggctgggacgagacgcat
caggcctgccaaaacgggaactcacagcatctggagcacctgctcttctacggggcggat
tcctcctcccagaacgcttctggaaacactgccttgcacatctgtgctttatacaacaag
gaaagctgtgcacgaatcctgctgtaccgtggagccagtaaagacatgaagaacaacagc
ggccagactccgttccaggtggctgttatgtccgggcattttgaattgggggagattata
aaaaaccaccaggatacagatgtggttccctttgtggagtctccaaagtacgccccccag
aggagagagagcacccggtcgctggcggtgccccacccccacccgtttctgcgggccaac
agcgacagcagcatgaatctgccggactggatggccgttcccaacgcgccgagcaccaac
atcgtttctgtgcagggatataagcacacaggaaccctgcggagctccagcagccccaga
ggagcgaggacgcggtccccgtcccgcggacggatcggagacaaggaggaccggagccgg
cagagccagagacgggggcctcccccgacctccaccaccaccaccattcaaaccgcaggc
cagcgcaggcgcctctacagcgccgtcccaggacgagtctttgtagcaacgcggtcccac
tccgctcagggcgagcgcgagataagcttcagtaaaggagacagggtcaaagtgttgagt
gtcggcgagggcggctactgggaggggacagtcagaggtcgcacgggatggttcccctcc
gactgtgtggaggaagtggtgcttcgaagtcaggacaaccgatcagagagtcgtggagaa
cgagccaagaggttgttccgccattacactgtgggatcatatgacagctttgatgctcca
agcgactacataatcaaggagaagacggtgcttctgcagaaaaaagacagtgagggattc
ggctttgtgcttcgaggggccaaagctcaaactcccattgaagagtttactcccactccg
gccttcccggccctgcagtatttggagtcggtggacgagggcggcgtggcgtggagagct
ggtctcaggatgggggatttcctcatcgaggtcaacggtcagaacgtggtgaaggtcggc
caccggcaggtcgtcaacatgatccggcagggcggcaacagcctcatggtgaaggttgtc
atggtaacccgcaaccccgacatggaggaaggcgcgcggaagaaaatccctcagcagagc
aagaggctgagcactccagccatcgccctgcgctccaaatcaatgacttcagagctggag
gagatggtggagagagctgctaccccttggaaaaaaaaatcagagttcgaatcctcacaa
gtttcagagaagaagaggacagtctatcagatggctctgaataaactcgatgaaattctt
gcagcggctcagcagacaatcagcaccaacgaggcgcccgggacacggggacacgggccg
aagagggaccggggaagaagtttctatggcaacgagccgagctacgcggaccagcctggg
atggggatgatgtcgggtctgggtctgggctacgagcgaggccagtacggcccgggtcac
ggccctccgcacggtattatgcggcagaaatccatcggtgtgcctgaggaggagaagcag
ttcctgcatcctcctgcggtgaagtttgcgcggagtctgtcggtgcctggtccagacgat
atccctcctcctcccacaacggctccaccggagcccccgttctcctccgctccaccactt
ggttggagaacaaagttgtcccagcagccctctgtctccatgtcccagtcaacatccagc
tctgcgcactaccagcccttctcccaaccggggcacctgagccagggtggcagggagagg
gcaggtggtcccaccgctggcccagcagcagaccacacgacaccgtacgttcacgcatct
gcccatacagctcagagcaggactgcgtcgcgaaaggttgcctatactggggagcctgtt
ggagctgggattggggctggcgcaggcgcaggcgctaaaccagcaggcctgaggagaggc
tacagcacagccgtacctccgtccagcattgctactgtaatgccccagcaacaacagact
acccagagtcaaccccagcgggcagaccgaagcacagctggagcaggtggccctaaagga
ggggccaggagaggcaagggccctctggtgaagcaatccaagatagaggagctgcgtcta
ggccagggaagtctagggagcaaagactcagtggagaaaagctccattcctatccccacc
atcattgtcaaggctccctcaaccagcagcagtggacggagcagccagggcagcagcgtg
gaggctgacgtccccacgtcaggggagacgggggacacaaaaacgcctcacggccctcct
ccgtccactcctgctccacagccacctgctccaccctccattcctgcaccaccacctcca
tctatgccttctattcgagcccaggataatctggactttactagccagttcggggccgcc
attgttggcgcggctcgccgagacagggagagatttcttgaagcccgacgaaagagtgcc
tccttcttcatgtctgctgaggaggatctgagtcttgggatgagtgaagcgctaggagga
gtgtcaagaactcaggtgtctcagcagcagttaaacgctcagcctgaaagctcatcaaca
cgattgcgcccttccaagtcaattgatgagggcatgttttctgcagacacctttatccaa
cacacccggagtatgcctccagcctttggcctaccggagtactcctctacggccctggac
tatcagcccaaatctgtgcctgctgatctgtacacagcagcaggtcgacagccagcaccc
tccgccaacaccacttttattcatcctcttactgggaaggcgctcgaccccacatcacct
ctgggcctcgccctggctgccagggaacgtgctctgagggatgacagcaggataaggagg
ggaacggagcacctattcacccgccagatgtcgagcgttgtgttcccttcatctactgtt
acctctcagccagtgtcgtcccacacgacgcagtcttcaagctcttacctggtgacctcc
tcttctctggcagctaccacacccacagtcggtcgcccaccctcgcccagaatcctccga
ggagcagggagtacttggggggaagaaggtggggagcgggagcgggatgggggaggcact
cgcgagggtcttagagtgcggttctcggaggacaaaactgtccacacacaccactatcag
tctcagccatatcagccgtcttacaaagagcgggagaggtcacgggagcgggaaagagac
cactcgagggagagggacatcaggagggcagagcaggcagctgagagtgcacccccgcaa
ccccgaagaccctcttttctcaggatggaaagtcaagccgatgcctatatgctgtctctc
acccctccctctcctccaccaaacattacccatcaggcttctggaagcacagggagtggt
atgatggtccttcctcctcctgccccttcagttgatgcggacgatgaatttgtttatgca
gaccccctccctcctccgttagagtttgcaaacagcttcgacagagggggatcgggatat
tcccaacatgcaatgctttccaacagcctgacacatcggcaacagcaagtccctccccca
ccacctcctccaccgcctccgccgcccccaccacctcctccccctcctcagaaagagcat
tatataagtggctttcctgcccatacacctctgccctctccccaagcaggtgactccact
gcatccagcctcacgtcatatgacagcgaagtggcaaatctgactcagtctgctccttca
ccttcacagacatcaccaaatcctccacccccttcctcaccctcaacccttcagccagcc
atgggtcttcctcctccccctgcagtctcacccccacctccccctggagctggtttctac
cacagacccttttcaatgtctcaccacctttacaacagcactcatgcatccgggcgatct
tcaccaacacctccccaacatacagttgcaccacctccagcttaccgaggtcccccagct
ccatcctccactgctgccacatccgtcccacataggggcaccgcctcccatgcaacgacc
gctagctgtgctgctacaaccaccactgctgccacaacaagctcctccactcagctccat
caagagcgaacacaccctgctcattcgacatactccactaccatcacaggacggacaggc
gagcaccatcgtcctcatcccactgccaaaaaaggagagtcccaggaaacggttgtggac
tctgggattgaggaactggatagccgcagtagcagcgaccatcacctggacagtattttg
ggccttagtggggctggtgtccgaggagacagactggatcggggagagagactcggagct
ggaggtccagggcgaattggaggaggtgcgggagaaacagaacgaggaggagcggacttt
ctggaatcatacatgagctacctggatgggcaaacctttgagatgcagaatgcgacggcg
gcagcttccacctacccaaaaaccagcaggtttagagaaggtagccgcactggtgactcg
catcgacagaccagcaccgcccctgcagcctaccactcccacaggcaaagagatgggcag
gtagaggatgacgtagaggagggacttggagacgacgagagtggtcaagacgggtacggg
atgagggacatgcagaatatgggccgtcccacgtcaccgtactttgataggccacgcact
cctgagatgagaaccctatggggcgacggccagatgagcggcgatatggggagccagtct
gggtcgcttttagaggggaagaagatttacccccctgcatccagcatgaagccaagcatt
atcactgagctgagcagcaaattgcagcaaagaagtaaagacagctggagcagccacaga
ccactgagcagacacagattttctgaagactctgcctccgctctgagcccgccctcagtc
cgctcccagtctctgtctccaatctctttatcgcagccgtccttatcgccgtccccaacc
ccggcttcccaatacccaaactggggacgttccccatctcctcagcctccagccgcatct
caacctccgcgctcacattctccggtgtccccgacgtcgtactccccttaccctacgtct
cccaagcacagacccgtgtaccggaacaaagctctggaattccagttcatccccagtcga
gagtcccgcaaagcggaatcacacatactccagcgtcgacgagctccgagtcccctcatc
tcccaatcagagaggcccaaagtggccccgccccgcccgtcgtcacttccccttctcccc
acttcacccctgtacagtgccatctacgacctccgcgggtcaatcaccccaccgtcacct
gggaatcctcttggagacccttacttctcaccctctcctcccctttttgccccctctgga
gcccctccacctccaaactccaccttagtagtgtcacgatccctttctccgactcatttt
ctgtccgggacgtcgtctccacccctgcacccccacccgccgcctacctgcctgagttac
ccgcacttaccgccgccttcccccacaaagcctttcgcttccaagccgctgccctactgg
accaagtatgatgttgcagactggctggcgtacctcaaccttagcgagcatagagatcgg
tttcttgataacgagattgatggcacccatttaccctctttgaccaaggaagactatctg
gatcttggggtgacaagagtgggacacagaatgaacatagagcgagccctaaggagtgta
atggacaggttgtccagcagcccatttcccatttctgtcctctctcctcgggaagggcag
cctgagaggaggagagacgacgggagtcggagctga
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integrated database retrieval system
