Gambusia affinis (western mosquitofish): 122822756
Help
Entry
122822756 CDS
T07758
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gaf04054
]
122822756 (nlrc3)
Pattern recognition receptors [BR:
gaf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122822756 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
LRR_12
Motif
Other DBs
NCBI-GeneID:
122822756
NCBI-ProteinID:
XP_043957574
LinkDB
All DBs
Position
LG20:22776423..22794875
Genome browser
AA seq
1134 aa
AA seq
DB search
MDRKQHYDSLMDRSKRIMWQDDCYMDLQSTSCCAATHTETQQLHWIQKHKEQLLSFVSHS
FLEEILQHLRNVNVLTSAEETSIKGAGQLQDQINMLTSITTAKESQSSDALQAFIESSDS
EVAQLILSYDATVKKHKEVLLQQYEKQRDRDSVSCPKLNISSRSLLMVDGLSDFQQKEHD
VMQVGVTRGGRRSHLRQLGLAKLFEPLTRVSLPPRVTLTVGVAGIGKTTWVRHFIRQWCQ
GTMCPDIHFVLPFTLCELNGLDKLSAERLLKMTFPHLPAPSLVLNDACRTLLIFDGLDEF
HSTLNFSDAAPCNDPKKEISIDDLVTNIIRGNLLPDVSVWVTSRPGVASQIPGGLVDRVT
EIPGFSPADIQIFLNHHFSENDFATRIWAHLEAHKILMVMCYIPRICWMLAETLLYIMQS
GTQESLPKTCTELYAHFCSMKAEVGEPRGREPVKSEQHHATNRKLLGNLGRLAFYSLLKH
KYTFSEQDLRAYGIDLLQTQCSLGVGVLIRMESTIHTTYRFTHLTLQEFLAATFYHVSSK
RAIFDLFSESTMSWPKIGFQNHFRSTFQHSQQAEDGHLDLFVRFLTGLLCPTTIKPLAGL
LALGKDDGSQKVWAGGFLQSLLSSVGSVVSLRAVNLAYCLQELQHSELLRSVEEDLRQGS
LAGKLTRPHCVVLGFLLHVSPECSEQTNLTGCLNYPTVKSLLPQLLYCTHLRLENNNFKD
DVMELLGSLLSAKDCHIRKISLADNVISNKGAKALSRALLVNRTLTSINLKNNNIGSKGA
KFLAEALKMNQALVSINLQNNSIGEEGAQAIADVLQSNRKLVSLNMRKNTIGAGGAKRIA
EALKTNRTLTKLILCSNQLGDKGTVALAEALTFNHTLLSLQLQSNSISNKGMTGLTKALR
LNRGLVSLNLRENSIGVEGARNMAHALQENNSLQNLDLTANLLHDDGVQAIAGAIRFNQG
LTSLHLQWNFIKSTATKALAQALLTNTTIQLLDLQENTIGNEGVIHLAEALKVNSSLRTL
CLQGVSAGTSGAVAMAEALTSNQTLQTLDLRGNAVGMEGAKALANSLKSNRSLKSLNLQE
NSLGMDGAIFIATALKGNHQLAYINLQGNGIGESGAKVISDAIRASAPGCVVDI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaagcagcactacgactcgctgatggaccgcagcaaacgcatcatgtggcag
gacgactgttacatggacctgcagtccacttcctgctgcgccgccacgcacacagagacg
caacagctacattggatccaaaagcataaagagcagctgctgagcttcgtttcacattcc
ttcctggaggaaatactccagcacctcagaaatgtgaacgtcttgacgtcagccgaagag
acgagcattaagggagcaggacagttacaggaccagatcaacatgctcacctccatcacc
actgcaaaggaaagccaaagctcggacgcgctgcaggcgttcatagagagctcagactct
gaggtcgcccagctcatcttaagctacgatgccacagtgaagaagcacaaagaggtgctg
ctgcagcaatatgagaagcagagagacagagattcagtcagttgccccaaactgaacatc
tcctcaaggagtttactgatggtcgatggactctccgacttccagcaaaaggagcacgat
gtgatgcaggtgggagtgactcgaggagggaggaggagccatctgaggcagctgggcctt
gccaagctctttgagcccctcacaagggtcagcttgcctcccagagtgacgctcactgtg
ggtgtggctggtattggcaagacaacctgggtgcgacacttcatcagacaatggtgccaa
gggactatgtgtccggatatacactttgtcttgcctttcacgttgtgcgagctcaacggt
ctggacaaactttctgcagagaggctgttgaaaatgactttcccgcatctgccagcaccc
agcttggtcctaaacgacgcctgcaggacgctgctcatcttcgatggtttggacgaattt
cacagcactttgaatttctctgatgcggctccttgcaacgacccaaagaaggaaatttcc
attgacgacctcgtgacgaacatcatccgggggaatctgctcccagacgtatcggtgtgg
gtgacttcgagaccaggagtcgcctcccagatcccaggcggattggtggaccgggtcacg
gagattccaggattcagcccagcggacatccagatctttctgaaccaccacttctcagag
aacgactttgccaccagaatatgggcacacttggaggcccataagatactaatggtgatg
tgctacataccacgcatttgctggatgctagcagagacgttgctgtacatcatgcagagc
gggacacaggaaagcctgcctaagacctgcactgagctgtatgcccatttctgctccatg
aaagcagaagtaggtgaaccaagaggcagggagcctgtaaaatctgagcagcatcatgca
accaatcgcaaactgctgggcaaccttggacgactggccttctacagcctcctgaaacac
aaatacacgttcagcgagcaggacctcagggcctacgggatagacctactgcaaactcaa
tgcagccttggagttggagttctcatccgaatggagtctaccatacacaccacttacaga
tttacacacctgaccctgcaggagtttcttgcagctacgttttatcatgtttcctccaag
cgggccatctttgacctgttctctgagagcacaatgtcatggcccaagattggcttccaa
aaccacttcagaagtacctttcaacactcgcagcaagccgaagacggtcatttggatcta
tttgtacgcttcctgacaggcttgctgtgcccaacaacaataaaacctctggctgggctc
ttggctctcgggaaagacgatgggagccagaaggtttgggccggagggtttttacaaagc
ctcctgtccagcgtgggttcggtggtgtccctccgcgctgtcaacctggcctattgttta
caagagctgcaacacagcgagctgctccggagtgtagaggaggacctacggcagggcagc
ttggccggaaaactgacacggccgcattgtgtggtgctgggtttcctcctgcatgtctct
ccagagtgcagtgaacaaaccaacctgacaggatgtctgaactacccaacggtgaaaagt
ttactcccacagctgctgtactgcacccatctcaggctggagaataataacttcaaggac
gacgtcatggagctgctcgggagcctcctgagcgccaaagactgccacatccggaaaata
agtttggcggacaacgtcatcagcaacaaaggagccaaagctctgagccgagccctgctg
gtgaaccgaactctgacctctatcaacttaaagaacaacaacattggatcaaaaggggcg
aagtttctggctgaggctctgaaaatgaaccaagctttggtatcaatcaacctgcagaat
aactccatcggggaggaaggagctcaggccatcgcagacgtcctgcagtccaaccgcaaa
ctcgtgtctctaaacatgcggaaaaacacaatcggcgcaggaggagccaagaggatcgca
gaggcgctgaagacaaaccgaactcttacaaagttgatactctgcagtaaccaactgggg
gacaaaggaaccgtcgctctggctgaagctctgactttcaaccacacgttgctgtcgctt
caacttcagagtaactcgatcagcaacaagggaatgacgggcctgaccaaagcgctgagg
ctgaaccggggactcgtctctctgaatttaagggagaactccatcggggtggagggagcc
aggaacatggctcacgctctgcaggagaacaactctctgcagaacctcgatctcacagct
aacctgctacacgacgacggggttcaagcgattgctggagcaatcaggtttaatcaagga
ctcacgtctctgcacctccagtggaacttcataaagtcgacagcgaccaaagctctggcc
caggcgctgctgaccaacaccaccatccagctgctggatttacaagaaaacaccatcggg
aacgaaggagtgattcaccttgctgaagctctgaaggtcaactcgtctctgcgaacctta
tgtctgcagggggtgtcagcggggaccagcggcgccgtggcgatggctgaagctctgacg
tccaatcagacgctccaaacattagacctgcgtgggaatgcggtgggaatggagggagcc
aaagctttggccaactctctgaaatccaacagaagcctcaaatcattaaatctgcaggaa
aactccttggggatggatggagccatattcattgctacggctctgaaggggaaccaccag
ctggcttacatcaatttgcagggaaatggaatcggtgaatctggggcaaaggtcatatct
gacgccatcagagccagcgctcccggctgcgtggtggatatctaa
DBGET
integrated database retrieval system
