Gambusia affinis (western mosquitofish): 122822758
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Entry
122822758 CDS
T07758
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gaf03037
]
122822758 (wdr90)
Cilium and associated proteins [BR:
gaf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122822758 (wdr90)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_1st
CFA20_dom
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
122822758
NCBI-ProteinID:
XP_043957577
LinkDB
All DBs
Position
LG20:22795943..22825025
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AA seq
1799 aa
AA seq
DB search
MASTDWQHPYVNIFKHVKVEEWKRSAKAGDVSSSMDRTLRCPVFSIKGPVPTNSYILIPK
SSNQSLGLTGRYFYLLFRPTAGKYFMVHLDVTVQEGQVVRISFSNMFKEFKSTATWLQFP
FLCGAAKDSVYEKTSSSARQGLVGPAPASVRWTCLMIDLCFTLTFYLNRHHGHLKSVKLC
ANMAVKNMFTSDLQLDPGMTFREAKLRGLSASQGTGPIPREMSFPVPKGGSWNDFYDHIK
FPSDGTKLPFDSIQKPDPAAGSPSYQKDEPRAATIGGPVQQLIASSKLLPRNRTSVVSSV
PELEAQEADDPLRHHAGVHVYAHPQDALSTHGDGSGDEAVCASVSLPVASFKESQQQQQL
LPDPILRLSRIIGFGGGTTRDALWTESGEEVVYPCHAIIVSMKILSREQRFFIGHTDKIS
ALTFNGSTTLLASAQGGSNSVVRLWDYGAGTCLSMFRAHAHSLSCLSFSYGGGVLCGVGR
DKHNKTMVVVWNTLNAAKGGEGTILAKAHTDVDIVTMKVTFFDETRMVSCGRENVRLWRV
RNGSLRSCPVCLGDFHSLDFTDVAFQEDAASDQLVDDRTLFASTRSGHILEIDYSRVTVK
TARRLMPAQQQHAERREKWTFNSGPGIPINSISVSSAFCATGTDDGFLRLWNLDFSAVIL
EAEHEGSVGLVSVSFDSLQVLAATSTGNLGYLDVSSRGYNTLMRSHTGDVLGFSVDGIRR
HLTTASADGTVRVWNMDSLHQLYDFVSVDKPCSVAFHPHEPTFSCGFCSGTVRVFDISSA
RLLAEHKQHRGEVIGLAFSSDGDLMYSADSEGSLVLHDASEQDHSVIRVACGVVARGTER
APDALVVSGDSSRLAFVGPTPHIVTVSDARSLDELLRVDISILDVESPELDSALKVRFSP
ASAEHLLVATSANKILWISTKTGRLLRQVSNVHKRPCSSLAVSEDRRFLLTSGHNTVKVW
DYKRTNQVNSQMYIGHSQPIRQVSFTPDQLGVVSVGDAIFLWDFLAETDECLIGSRSPLK
ASYVSRPPDGEVNAAQLSNGMPRQAAPRPSSQHQLDVSAMDPEIQGGLGHLSVCDDDPAK
PVGPTGPSKSPDHRPVSFLKVTDLDSASPGETDKLETMELGQNKPDRPDCYKHFIPRLKA
SSLYQSVSVPQPQDEGIKLKAVIGYNGNGRGNMGWSPDQGLFAYSCGGVVVLEHLHTGTQ
SHLQGHSQEISCLAISNDAQTLVSAAGSSRSLISVWDVQTATCRGTTSHHKGAVQSLAFS
RDDLFFLSVGDFSDPVLALWSLESVQLLCSVSMSAPVHDAAFSPAAARQLACVGSEGIHF
CLIQTRAASADIKACRVSAPSEVGDVELTALCYHMDSFLLTSTSGGHVCAWDVNKQRCFM
VWKADEGEIGVLLCRENLLLTGSAAGRLQLWQIEVVQGMKSAETTCSIKDVTLSGLKVVV
EQEVVLDGKLVSAAFDNSMDMGIVGTTAGTLWYINWSDSSIIRLVSGHRAKVNDVVFSRD
ESRFATCSQDGSVRVWSTGSLELVVQFQVINQACSCLCWSTSSSSDGSRIAAGYGDGTLR
IFQLASTEMEMKLRPHQEAITAITYSATGHVILSAGSKGLVAVSSPINGATIRVIRDHKG
AAIKSIQSVSEQCKRFGLEGNEMFLVAGADRRVSVWAADWSKEKCDLLDWLSFPAPPSSE
EDSLPPSLAAFYPADPSLLLYTGYGLDKELSFYSLTKKQIIKKISLTHWATCISLSPRGH
LLAVGCEERVLKLIKSTSGRFQDFLQHSDALQTCRFSPSGSLLFSVAYNEVLLWEVQGF
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacagattggcagcatccttacgtgaacattttcaaacatgttaaagttgag
gaatggaaaaggtcggccaaagctggagatgtgtcttcttctatggaccggactctgagg
tgtccggtgttttcgatcaaaggtccagttcccaccaacagttacatcctcattcccaaa
agcagcaaccagtctctgggcctgaccggtcgatacttctaccttctgttcagacccacg
gctggaaaatacttcatggtccacctggacgtcaccgtgcaggagggccaggtggttcgg
atctccttttccaacatgttcaaggagttcaagtccacggctacgtggctccagtttccc
ttcctttgtggagctgcgaaggattcggtttatgaaaaaacctcaagctcagcgaggcaa
ggtctggtgggtccggctccggcctcggtgcgttggacctgcctgatgatcgacctgtgc
ttcacgctcaccttctacctcaaccggcaccacggccacctgaagagcgtcaagctctgc
gccaacatggccgtgaaaaacatgttcaccagcgacctgcagctggacccgggaatgacc
ttcagggaggcgaagctccgaggtctgtccgcctcacagggaacgggtccgattcccaga
gagatgtccttcccggtgccgaaaggaggctcctggaatgacttttatgatcacatcaag
tttccctctgatgggactaaacttccctttgactccattcagaaaccggatccagcagct
ggaagtccttcataccagaaagacgagcctcgcgccgccaccatcggcggcccggttcaa
cagctgatcgcctcctcaaaactcctcccgaggaatcgaacgtccgtggtgtccagcgtt
cccgagttggaggcgcaggaggcggacgacccgctgcgccaccacgcaggagttcacgtg
tacgcgcatccgcaagacgctctcagcacgcacggagacggcagcggggatgaggcggtt
tgtgcctccgtgtcacttcctgtggcctcgttcaaagagagccagcagcaacagcagctg
ctgcccgacccgatcctgcggctcagccggatcatcggcttcggaggaggcaccactaga
gatgccctgtggaccgaatcaggggaggaagtggtttatccgtgccacgcaatcattgtt
tctatgaagattctgtcccgcgagcaaagattcttcatcggccacacggataagatttct
gcgctgacgtttaacggcagtacgactctcctggcgtcggcccagggcggcagcaacagc
gtcgtgcggctgtgggactacggcgcagggacctgcctgtccatgttcagggctcacgct
cattctctgtcctgcctcagtttctcctatggaggcggcgtcctctgtggcgtggggaga
gacaaacacaataaaacgatggtggtggtgtggaacacgctaaacgctgctaaaggcgga
gagggaaccatcttggccaaagcgcacacagacgtggacattgtcaccatgaaggtcact
ttctttgacgagaccaggatggtgtcgtgcggccgagagaacgtccgtctgtggcgggtc
cggaacgggtcgctgcggtcctgcccggtctgcctgggcgactttcactccctggacttc
accgacgtggcgttccaggaggacgccgcctctgaccagctggtcgacgatcgaacgctg
ttcgccagcactcggagcggccatattttggagatcgactacagcagagtgacggttaaa
accgccaggcggttgatgccggcacagcagcagcatgcagaacgcagagagaaatggacg
ttcaacagcggtccagggattcccatcaacagcatcagcgtgtcttcggcgttctgcgcc
accggcaccgacgacggcttcctgcggctctggaacctcgacttctctgctgtcattttg
gaggcggagcacgaaggctcagtgggcctggtgtcggtgtcgttcgacagcctgcaggtt
ctggcggccacctccaccgggaacctgggctacctcgacgtgagcagccgcggctacaac
actctgatgaggtcgcacaccggcgacgtgctgggcttcagcgtggacggcatccggcgc
cacctgacgaccgcctcggccgacggaacggtgcgcgtgtggaacatggattccttacat
cagttgtacgatttcgtgtcggtggacaagccgtgctccgtggcgtttcatccacacgag
ccgaccttctcctgcggcttctgctccggaaccgtcagagtgtttgacatttccagcgcc
aggctgttggccgagcataagcagcacagaggggaggtgatcggtctggccttctcctca
gacggagacttgatgtacagcgccgactctgagggctctctggtgcttcatgacgcctca
gagcaggatcacagcgtgatcagagtggcatgcggcgtcgtggcccgcggcactgagcgc
gctccagacgctctggtggtcagcggcgacagcagccggctggcgttcgttggtccgacg
ccgcacatcgtcaccgtctctgacgctcgctctctggacgagctgctgcgtgttgacatc
agcattttggacgtggaaagccccgagctggattcggcgctgaaggtccgcttctctccg
gcctcagctgaacatttactcgtcgctacgtctgctaacaaaattctgtggatcagcacc
aagacgggccgcctgctcagacaggtgtccaacgtccacaagcgtccctgttcctctctg
gctgtgagtgaagacaggcgcttcctcctcacgtctggacacaacactgtgaaagtgtgg
gactacaagaggacaaaccaggttaactcacagatgtacatcggccacagtcagccgatc
cgccaggtcagcttcacccctgaccagctgggggtcgtctccgtgggagacgccatattc
ctctgggacttcctggcagagactgatgaatgtttaattggcagcagatccccacttaaa
gctagctacgtttctcggccaccagatggtgaagtgaatgcagcacagctgtccaatggg
atgccccggcaggcggcgcctcgcccctcctcacagcaccagctggacgttagcgccatg
gacccagagattcagggaggtttgggtcacctgtcggtttgtgacgacgacccagcaaaa
ccagtcggacccactggtcccagtaagagccccgaccacagacctgtctcctttctcaaa
gtcaccgatttggacagcgcttctcctggggaaacagacaaactggaaaccatggagttg
ggtcagaacaaaccggaccgtccagactgctataagcactttattccccgtttgaaagcc
tcgtctctgtatcagtccgtttcagttcctcaacctcaagacgaaggcataaagctgaaa
gcagtgattggttacaacggcaacggccgaggcaacatgggctggagccccgatcagggt
ctatttgcgtactcctgcggcggcgtggtggtgttggagcatctccacacaggaacccag
agtcacctgcagggccacagccaggaaatctcctgcctggccatctctaacgacgctcag
acgttggtgtcggccgctggcagcagcaggagcctcatttccgtctgggatgttcagacc
gccacctgccgcggaaccacctcccaccacaagggggcggtgcaaagccttgccttctcc
agagacgacctcttcttcctctctgttggagatttctctgatccggttctggcgctgtgg
agtttggagtcggtccagttgctctgcagtgtcagcatgtcggcgccggtccatgacgcg
gccttcagccccgcagcagccaggcagttggcctgtgtggggagcgaagggatccacttc
tgcctcatccagactcgcgccgccagcgccgacatcaaggcctgcagggtgtcggcgccg
tcagaagtgggcgacgtggagctgaccgctctctgctaccacatggactccttcctgtta
accagcacctccggcggacatgtttgtgcgtgggacgtaaacaagcagcgctgcttcatg
gtctggaaagcagatgagggagaaatcggagttctgctttgtcgagagaatctcctgctg
acgggcagcgccgccggccgcctgcagttatggcagattgaagtggttcagggcatgaag
tctgctgagacgacctgcagcataaaagatgtgaccctgagtgggttgaaggtcgtggtg
gagcaggaggtcgtgctggacgggaagttggtcagcgcggccttcgataactccatggac
atgggcatcgttggcaccaccgcgggaacgctctggtacatcaactggtcagacagcagc
atcatccgcctggtcagcggacacagagcaaaggtcaacgacgtcgtcttcagccgcgac
gagagccgcttcgccacctgcagccaggacggcagcgtgagggtttggtcgaccggcagc
ttggagctggtggtccagttccaggtcatcaaccaggcctgcagctgtctgtgctggagt
acgtcgtccagcagcgacggctcgcggatcgccgccggctacggtgacgggacgctccgg
atcttccagctggcctccactgagatggagatgaagctgcgtcctcatcaggaagccatt
accgccatcacttactcagccaccggtcatgtgatcctctcagcaggaagtaaaggtctg
gtcgccgtcagcagccccatcaatggagcgacgattcgagtcatcagggatcacaaaggg
gcagcgatcaaatcgatccagagcgtcagcgaacagtgtaagcggtttggactggaagga
aatgagatgtttctggttgccggcgccgacagacgggtcagcgtttgggccgccgactgg
tccaaggagaagtgtgacctgctggactggctgtcgtttcccgctccgcccagctctgaa
gaggacagtttgccgcccagcctggctgctttctacccggcagaccccagcctgctgctc
tacaccggctacggcctggacaaagagctgtccttctacagcctgactaaaaaacaaatc
attaagaagatttccctgacccactgggccacctgcattagcctgtctcccaggggtcac
ctgctagctgtggggtgcgaagagcgagtcctgaagctgatcaagtcgaccagcggacgg
ttccaggacttcctgcagcacagcgacgctctgcagacgtgccgcttctctccgtccggg
tcgcttctcttttctgtcgcgtacaacgaggttctgctctgggaagtgcagggcttctga
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integrated database retrieval system