Gambusia affinis (western mosquitofish): 122823047
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Entry
122823047 CDS
T07758
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04520
Adherens junction
gaf04810
Regulation of actin cytoskeleton
gaf04820
Cytoskeleton in muscle cells
gaf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122823047
04520 Adherens junction
122823047
09142 Cell motility
04820 Cytoskeleton in muscle cells
122823047
04810 Regulation of actin cytoskeleton
122823047
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122823047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122823047
04147 Exosome [BR:
gaf04147
]
122823047
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122823047
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122823047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
GIT1_C
Talin_R4
Mob_Pre
Metal_resist
Harpin
Motif
Other DBs
NCBI-GeneID:
122823047
NCBI-ProteinID:
XP_043958204
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All DBs
Position
LG20:16069717..16099784
Genome browser
AA seq
1068 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSAPVAAVQAAVSNLVRVGKD
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLSVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTYEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALGLIDSKMAQAKNWLRDPNAPPGDSGEQAV
RQILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRGRGQGASPAAMQKAQQVSQG
LDVLAGKVSNAARKLEAMTNSKQAIAKRIDAAQSWLADPHGSPEGEENIKALLNEARKIA
DMCEDPKEREEILRSAGELAAMTAKLSELRRQGKGDTPEARALAKQIATALQNLQSKTNK
AVANSRPAKAAVHLEGKTEQAQRWIDNPTVDDSGVGQAAIRGLVAEGRRLANALQGPYRQ
ELMGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIF
SDTTTPIKLLAVAATSPLDAPNRDEVFEDRAANFENHANRLGATAEKAAAVGTANKSTVE
GIQASVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTVLVDEAIDT
KSLLDASEDAIKKDLDKCRVAMTNHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REMVKAASDELSQTISPMVMNAKAVAGNIHDPTLQKGFLDSGYKILGAVAKVREAFQPQE
PDFPPPPPPELDQLSLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEHKAGEKVNEPI
MVAARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKAS
DEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQ
ATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgccggttttccacacgaagacgatagaaagtatcctggagccggtggctcagcaaata
tcccatttggtgataatgcacgaggaaggtgaagttgacgggaaggctatcccagatctg
tccgcgccggtggctgccgtgcaggcggccgttagcaacctggttcgggttggaaaggat
accgtgcaaacaacagaggaccagatcatgaaaagggatatgccaccagcctttatcaaa
gtggagaatgcctgcacaaaactggttcaagctgcctccatgctgaaagctgacccatac
tctgttcctgctcgggattacctcatcgatggatctcgaggcattctgtctggcacatct
gacctgctcctcacttttgatgaggcagaggtccgcaaaataatccgtgtgtgcaaaggc
atcttggaatatctgagcgtggcagaagtggtggaatcaatggaggacctgatcacatac
acaaagaatctggggccaggtatgacaaagatggcaaagatgatcgatgagcgccagcag
gagctcacacatcaggagcatcgtgtgatgctggtcaattccatgaatacagtcaaagag
ctgctgcccatcctcatctcaggtataaaaatctttgtgacaaccaagacatctgggagc
cagggtgtggaggaagccctgaagaaccgaaacttcacttatgagaagatgagcgctgag
ataaatgagatcatcagagtgctgcagctcacatcctgggatgaagacgcctgggccaat
aagaaggacactgaggccatgaagagggctctgggactgattgattcaaagatggctcag
gctaaaaactggctgagggatccaaacgctccaccaggggactccggtgagcaggccgtc
cgtcagatcttggatgaagctgggaaagtcggtgagctctgtgctgggaaggagcgcagg
gacatcctgggaacagccaagactctgggtcagatgactgaccaggtgtctgagatgagg
ggaagaggtcaaggagcatccccggctgccatgcagaaggcacagcaggtttcccagggg
ctcgacgttctggccggcaaggttagcaatgctgctcgcaaactcgaggccatgaccaac
tccaagcaggccatcgccaaaaggatcgacgctgcacaaagctggcttgcagaccctcat
ggcagcccagagggagaggagaatatcaaggccctcctcaatgaggccagaaagattgca
gacatgtgtgaggatcccaaagaaagagaagagattttgcgctctgctggagagctggct
gccatgactgccaagctgtctgaactcagaagacagggtaaaggtgacactcctgaggcc
cgagctttggccaagcagatagcaacagccctgcagaacctgcagtcgaagaccaacaag
gctgtggccaacagccggcctgcgaaggctgctgttcacctggaggggaagacggagcag
gcgcagcgctggattgacaaccccaccgtggatgacagcggtgtgggtcaggcagccatc
cgtgggctggtggccgagggccgccggctggccaatgctctgcagggcccgtataggcag
gagctgatgggaaaatgcgagcaggtggagcagctcatggcccagctggctgacttggcc
gcccgtggcgaaggggactccccgcaggcacgcgctgtggctcagcagctccaggaagcc
ttgaaagacctgaaaggaaagatgcaggaggcaatgactcaggaagtgtctgacatcttc
agtgacaccaccacccccatcaagttgctggcagtggctgctacatcgcccctcgacgct
cccaacagagatgaggtctttgaggacagagccgccaacttcgagaaccacgccaacagg
cttggcgccacggccgagaaggcggccgctgtcggcactgcgaacaagagtacagtggag
ggaatccaggcttccgtcaaatcaaccagagatctaacaccacaagtggtgtctgctgct
cgcattctgctgagaaaccctggcaatcaggcagcatatgaacattttgagaccatgaag
aatcagtggattgacaatgtggaaaagatgactgttttggtcgatgaggccattgatacc
aaatctctgctggacgcctctgaggacgccataaagaaggacttggataaatgccgtgtt
gccatgaccaatcaccagcctcagatgctggtggccggcgctaccagcatcgcccgaaga
gccaaccgcatccttctggtggcaaaacgagaggtggagaactccgaagatccgaaattc
agagaaatggtgaaagctgcatcagatgaactgagccagacgatttctcccatggtgatg
aatgcgaaggctgtggctggaaatatccacgatccaactcttcagaagggatttttggat
tcgggttataagatacttggagctgtagcaaaggttagggaggccttccagcctcaagag
ccagacttcccaccaccaccacctccggagctggatcagcttagcctcaatgatgaagca
gcacctcccaaacctcctcttccagagggagaagttcctccacccagacctcctcctcct
gaggagaaagacgaggagttcccagagcacaaagctggagagaaagtcaatgagcccata
atggtggctgctaggcagcttcacgacgaagcccgcaaatggtccagcaaaggaaacgac
atcatcggtgctgccaagcgaatggccctgctcatggcagaaatgtcccgtttggttcgt
ggaggcagcggaaacaaacgcgccctgatccagtgcgccaaggacatcgccaaagcctct
gacgaggtcacacggctggcgaaggaagtggccaagcagtgtaccgacaaacgaatccgg
accaacctgctccaggtgtgtgagcgcattcccaccatcagcactcagctcaaaatcctg
tccactgtcaaggccaccatgttgggccgtaccaacatcagtgaagaggagtctgagcag
gcgactgaaatgttggtccacaacgcccagaacctgatgcagtctgtgaaggagactgtg
agagaggcggaggcagcttccattaagatccggacagatgcaggtttcaccctccactgg
gtcagaaagaccccctggtaccagtaa
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