Gambusia affinis (western mosquitofish): 122823089
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Entry
122823089 CDS
T07758
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04060
Cytokine-cytokine receptor interaction
gaf04217
Necroptosis
gaf04620
Toll-like receptor signaling pathway
gaf04621
NOD-like receptor signaling pathway
gaf04622
RIG-I-like receptor signaling pathway
gaf04623
Cytosolic DNA-sensing pathway
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122823089
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122823089
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122823089
04621 NOD-like receptor signaling pathway
122823089
04622 RIG-I-like receptor signaling pathway
122823089
04623 Cytosolic DNA-sensing pathway
122823089
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122823089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
gaf04052
]
122823089
Cytokines and neuropeptides [BR:
gaf04052
]
Cytokines
Interferons
122823089
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
FEZ
TniB
DUF5446
CF222
Motif
Other DBs
NCBI-GeneID:
122823089
NCBI-ProteinID:
XP_043958275
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Position
LG20:complement(11224454..11225397)
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AA seq
182 aa
AA seq
DB search
MLNRIFFACVFLGLFSSALSCRWMEHKFRQYSGNSLNLLDMMANNITNSTEDEENTVAFP
DHLYSQASKASAEGKLSFAVHILKEVSALFEEDQSSSSWQEVTVENFLNVVNKQADELHS
CIKGHSHMRKRNTKLHLYFKRLSNEILAKMGHSADAWELIRREVKVCLMKADHLVSSLLP
SN
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaggattttcttcgcttgtgtgtttctcggtctgttctcctccgcgctgagc
tgcaggtggatggagcataaattcagacagtacagcggaaactctttgaatctgctggat
atgatggcgaataacattacgaacagcactgaggatgaagagaacactgtggccttccct
gatcatctgtacagtcaggcatccaaagcatcagctgaaggtaaactttccttcgcagtt
cacatcctgaaggaggtttctgccctgtttgaggaagatcaaagctcttcatcatggcag
gaggtcacagtggagaactttctcaatgttgtcaacaaacaggctgatgagcttcactcc
tgtattaaaggccatagccacatgaggaagaggaacaccaagctgcacttgtatttcaag
agattatccaatgaaatcctggcgaaaatgggccacagtgctgacgcctgggagctgatc
aggagggaagtcaaagtctgtctaatgaaagcagaccacctggtttcctctctgctcccc
tccaactaa
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