Gambusia affinis (western mosquitofish): 122823267
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Entry
122823267 CDS
T07758
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06493
integrin beta 3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03266
Virion - Herpesvirus
gaf04081
Hormone signaling
gaf04145
Phagosome
gaf04148
Efferocytosis
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04810
Regulation of actin cytoskeleton
gaf04820
Cytoskeleton in muscle cells
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
122823267
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
122823267
04512 ECM-receptor interaction
122823267
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122823267
04148 Efferocytosis
122823267
09144 Cellular community - eukaryotes
04510 Focal adhesion
122823267
09142 Cell motility
04820 Cytoskeleton in muscle cells
122823267
04810 Regulation of actin cytoskeleton
122823267
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122823267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122823267
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122823267
04515 Cell adhesion molecules [BR:
gaf04515
]
122823267
04090 CD molecules [BR:
gaf04090
]
122823267
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122823267
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122823267
Cell adhesion molecules [BR:
gaf04515
]
Integrins
Integrin beta subunits
122823267
CD molecules [BR:
gaf04090
]
Proteins
122823267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_TEN
EGF_Teneurin
BNR_6
Motif
Other DBs
NCBI-GeneID:
122823267
NCBI-ProteinID:
XP_043958637
LinkDB
All DBs
Position
LG20:complement(18494026..18518749)
Genome browser
AA seq
792 aa
AA seq
DB search
MAALPTHWLLWMCVFTFAGKTAASGSNVCTSRGASTCKQCLAVHPSCAWCFQEDFGHGVA
SSSRCDLKKNLIAAGCEPSGLESPTSRLQVIEDRPLSNKAAGATQDVTQIKPQKLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGRGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPEAAVRNPCYSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVHPNDGRC
HLNADNMYSMSTTMDYPSLALITDKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLIQKAYAKIRSKVELELLGVPEELSLSFNATCLNGELIPGLKSCSGLKIGD
TVSFSVEARARGCPRQKKKTFIIKPVGFKDSLTITVTFECDCKCQSKAQLNSPKCSNGNG
TYECGICLCHPGRLGPYCECAEGDYNPMEQGRCSGPAGSGGPVCSGRGDCVCGQCVCHSS
DFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCMSNL
GLLCSGRGQCVCGVCECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLHDDNTC
SRICKDEIELVDKIVLHDTNAVNCSYKDENDCVEHFQYYEDASGKSILFVVKEPDCPKGP
DILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTVHNPLYKGAT
STFTNITYRGKD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctcccaacgcactggctcttatggatgtgtgttttcacatttgcaggaaaa
acggcagcaagcggttcaaacgtgtgcacctccagaggagccagcacatgcaagcaatgc
ctggctgtgcaccccagctgtgcttggtgcttccaggaggactttggtcatggagttgcc
agctcgtcacgctgcgacctgaagaaaaacctgatcgctgcgggttgtgaaccatccggt
ctggagtctccgaccagcagactccaagtgatcgaggaccggccgctgagcaacaaggcg
gccggagcgacccaagatgtcacccagataaagccgcagaaactgcatatcactctcagg
ccagatgatgcaaagcgcttcacagtgaaagtgcggcaggtagaagactacccggttgac
ctttactacctcatggacctgtcctactccatgaacgatgaccttttccgtctgaggacg
ctgggccgcggtctggccgaagccatgaaccgaaccaccagcaacttgcgcatgggtttt
ggggcttttgtggacaagccgctgtcgccttacatgtacatctcacctgaggcggccgtg
agaaacccctgctacagcattaataccacctgtctgccccagttcggctacaaacacgtg
ctgtctttgacggaggaagtgggccgcttcacggaggaggtgaagaagcagatggtgtcc
aggaaccgagatgccccggagggaggattcgatgcaatcatccaggctgctgtgtgcaag
gagcagatcggctggcgtccaggtgcttcccacctcctgattttcacctccgatgccaaa
acccatgtggctctggacggacgactcgctggaatcgtgcatcccaacgacggacggtgc
cacctgaacgccgacaatatgtacagcatgtccaccactatggattatccgtcacttgct
ttgatcacagacaaaatgtcagagaacaacatcaacctcatctttgcagtcaccaaccct
gtggtgcccctttaccagaactacagtgagcttattcctggcaccacagtgggaacattg
tccaacgactctggaaacgtcatccagctcatccaaaaagcctacgctaaaattcgctct
aaagtggagctggagcttctaggcgtcccagaggagctgtccctgtcctttaatgccacc
tgtctgaacggagagctcatccccggcctcaaatcctgctccggcctcaagatcggagac
acggtctcgttcagcgtagaggcccgcgctcgaggctgtcccagacaaaaaaagaagacc
ttcatcatcaaaccagttggcttcaaggactccctcaccatcactgtcacctttgagtgt
gactgcaagtgccagagcaaagcccagctaaacagccccaaatgtagcaacgggaacggt
acctacgagtgcggcatctgcctgtgccacccgggcaggttagggccgtactgcgagtgc
gcagagggcgactacaaccccatggaacagggccgctgcagcgggccagcgggatccggg
ggacccgtctgcagcggccgcggcgactgcgtgtgcggccagtgtgtgtgccacagcagc
gacttcggaaaggtgtgggggaagctgtgtgagtgtgatgacttcaactgcctgcgatac
aaaggagagctgtgctcaggccatggagtgtgtaactgcggtttctgccagtgtgcgcca
gactggcagggtgagaactgtaactgctcccgacgcacggacacctgcatgtccaacctg
ggtctgctctgcagcggcaggggccagtgtgtctgtggggtctgcgagtgtacccagccg
ggggcctacggggccacgtgtgacaagtgccccacctgcccagacgcttgtaccatgaag
aaggagtgcgtggagtgtaaacatttcaaaaggggaaagctgcatgacgataacacctgc
agtcgaatctgcaaggatgagattgaacttgtagataaaatagtcctccatgacacaaac
gcggtaaactgctcctataaagacgaaaacgactgcgtggagcatttccagtactacgag
gacgccagcggcaaatccatcctgtttgtggtcaaagagccggactgccccaagggtccg
gacattttggtggtgctcctgtcggtggcgggagccattttgttcctcggactggccgct
ctgctgatctggaagctgctggttaccatccacgacaggcgggagtttgccaaattcgag
gaggagcgcgctcgggccaagtgggacacggtgcacaatcctctttacaaaggagcaacg
tctaccttcacaaacatcacatacagaggaaaagactga
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