KEGG   Gambusia affinis (western mosquitofish): 122823267
Entry
122823267         CDS       T07758                                 
Name
(RefSeq) integrin beta-3-like isoform X1
  KO
K06493  integrin beta 3
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03266  Virion - Herpesvirus
gaf04081  Hormone signaling
gaf04145  Phagosome
gaf04148  Efferocytosis
gaf04510  Focal adhesion
gaf04512  ECM-receptor interaction
gaf04810  Regulation of actin cytoskeleton
gaf04820  Cytoskeleton in muscle cells
gaf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    122823267
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    122823267
   04512 ECM-receptor interaction
    122823267
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122823267
   04148 Efferocytosis
    122823267
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    122823267
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    122823267
   04810 Regulation of actin cytoskeleton
    122823267
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122823267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gaf04131]
    122823267
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gaf04147]
    122823267
   04515 Cell adhesion molecules [BR:gaf04515]
    122823267
   04090 CD molecules [BR:gaf04090]
    122823267
Membrane trafficking [BR:gaf04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    122823267
Exosome [BR:gaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122823267
Cell adhesion molecules [BR:gaf04515]
 Integrins
  Integrin beta subunits
   122823267
CD molecules [BR:gaf04090]
 Proteins
  122823267
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin EGF_integrin I-EGF_1 EGF_2 EGF_TEN EGF_Teneurin BNR_6
Other DBs
NCBI-GeneID: 122823267
NCBI-ProteinID: XP_043958637
LinkDB
Position
LG20:complement(18494026..18518749)
AA seq 792 aa
MAALPTHWLLWMCVFTFAGKTAASGSNVCTSRGASTCKQCLAVHPSCAWCFQEDFGHGVA
SSSRCDLKKNLIAAGCEPSGLESPTSRLQVIEDRPLSNKAAGATQDVTQIKPQKLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGRGLAEAMNRTTSNLRMGF
GAFVDKPLSPYMYISPEAAVRNPCYSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIVHPNDGRC
HLNADNMYSMSTTMDYPSLALITDKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLIQKAYAKIRSKVELELLGVPEELSLSFNATCLNGELIPGLKSCSGLKIGD
TVSFSVEARARGCPRQKKKTFIIKPVGFKDSLTITVTFECDCKCQSKAQLNSPKCSNGNG
TYECGICLCHPGRLGPYCECAEGDYNPMEQGRCSGPAGSGGPVCSGRGDCVCGQCVCHSS
DFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCMSNL
GLLCSGRGQCVCGVCECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLHDDNTC
SRICKDEIELVDKIVLHDTNAVNCSYKDENDCVEHFQYYEDASGKSILFVVKEPDCPKGP
DILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTVHNPLYKGAT
STFTNITYRGKD
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggctgcgctcccaacgcactggctcttatggatgtgtgttttcacatttgcaggaaaa
acggcagcaagcggttcaaacgtgtgcacctccagaggagccagcacatgcaagcaatgc
ctggctgtgcaccccagctgtgcttggtgcttccaggaggactttggtcatggagttgcc
agctcgtcacgctgcgacctgaagaaaaacctgatcgctgcgggttgtgaaccatccggt
ctggagtctccgaccagcagactccaagtgatcgaggaccggccgctgagcaacaaggcg
gccggagcgacccaagatgtcacccagataaagccgcagaaactgcatatcactctcagg
ccagatgatgcaaagcgcttcacagtgaaagtgcggcaggtagaagactacccggttgac
ctttactacctcatggacctgtcctactccatgaacgatgaccttttccgtctgaggacg
ctgggccgcggtctggccgaagccatgaaccgaaccaccagcaacttgcgcatgggtttt
ggggcttttgtggacaagccgctgtcgccttacatgtacatctcacctgaggcggccgtg
agaaacccctgctacagcattaataccacctgtctgccccagttcggctacaaacacgtg
ctgtctttgacggaggaagtgggccgcttcacggaggaggtgaagaagcagatggtgtcc
aggaaccgagatgccccggagggaggattcgatgcaatcatccaggctgctgtgtgcaag
gagcagatcggctggcgtccaggtgcttcccacctcctgattttcacctccgatgccaaa
acccatgtggctctggacggacgactcgctggaatcgtgcatcccaacgacggacggtgc
cacctgaacgccgacaatatgtacagcatgtccaccactatggattatccgtcacttgct
ttgatcacagacaaaatgtcagagaacaacatcaacctcatctttgcagtcaccaaccct
gtggtgcccctttaccagaactacagtgagcttattcctggcaccacagtgggaacattg
tccaacgactctggaaacgtcatccagctcatccaaaaagcctacgctaaaattcgctct
aaagtggagctggagcttctaggcgtcccagaggagctgtccctgtcctttaatgccacc
tgtctgaacggagagctcatccccggcctcaaatcctgctccggcctcaagatcggagac
acggtctcgttcagcgtagaggcccgcgctcgaggctgtcccagacaaaaaaagaagacc
ttcatcatcaaaccagttggcttcaaggactccctcaccatcactgtcacctttgagtgt
gactgcaagtgccagagcaaagcccagctaaacagccccaaatgtagcaacgggaacggt
acctacgagtgcggcatctgcctgtgccacccgggcaggttagggccgtactgcgagtgc
gcagagggcgactacaaccccatggaacagggccgctgcagcgggccagcgggatccggg
ggacccgtctgcagcggccgcggcgactgcgtgtgcggccagtgtgtgtgccacagcagc
gacttcggaaaggtgtgggggaagctgtgtgagtgtgatgacttcaactgcctgcgatac
aaaggagagctgtgctcaggccatggagtgtgtaactgcggtttctgccagtgtgcgcca
gactggcagggtgagaactgtaactgctcccgacgcacggacacctgcatgtccaacctg
ggtctgctctgcagcggcaggggccagtgtgtctgtggggtctgcgagtgtacccagccg
ggggcctacggggccacgtgtgacaagtgccccacctgcccagacgcttgtaccatgaag
aaggagtgcgtggagtgtaaacatttcaaaaggggaaagctgcatgacgataacacctgc
agtcgaatctgcaaggatgagattgaacttgtagataaaatagtcctccatgacacaaac
gcggtaaactgctcctataaagacgaaaacgactgcgtggagcatttccagtactacgag
gacgccagcggcaaatccatcctgtttgtggtcaaagagccggactgccccaagggtccg
gacattttggtggtgctcctgtcggtggcgggagccattttgttcctcggactggccgct
ctgctgatctggaagctgctggttaccatccacgacaggcgggagtttgccaaattcgag
gaggagcgcgctcgggccaagtgggacacggtgcacaatcctctttacaaaggagcaacg
tctaccttcacaaacatcacatacagaggaaaagactga

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