Gambusia affinis (western mosquitofish): 122823284
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Entry
122823284 CDS
T07758
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122823284 (mms19)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122823284 (mms19)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122823284 (mms19)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
122823284 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
TOR1L1_N
API5
HEAT_ECM29
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
122823284
NCBI-ProteinID:
XP_043958676
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All DBs
Position
LG20:complement(3652286..3670432)
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AA seq
1025 aa
AA seq
DB search
MAAESPLLLSLVEEFVSGLQDSKAKDTATGVKDGQFTILQLVEALGQSLTSSQPHTRARG
VQLLSEVLQDNYGALTEREVELLLAFYENRLKDHYVITPPVLRGLLALTKSRKLPPGSAV
SMLRSVFQDVHVQSLMLAERACVYNMLINLMETREDELKGLGADFVFGFVQSMDGERDPR
NLLLAFQIARNIILQGYSMGKFTEELFEVTSCYFPIDFSPPPNDPHGITKEELTQALRAV
LTGTPKFAEFLLPLIIEKLDSDVQSAKLDSLQTLAASVGQYEHRDLAEFLEGLWSSLRRE
VFQTSSEKIEAAALAAVTALTSCLSRSVLNSDSEDSLSSFLDLLLRDCKHHLFEPDLKLV
WPSVKLLQAACSTSYRAAHIITSAVVPPLVEQYNSRTQCSHRRTLLEVAQRFIQSTASCQ
SVDHDESLLSAYKDSLCSLVFSALSESNSSLQITATSVLTSLAQQPGLLLDSDIELAADH
LTRLLLTDEDERVSVAVVECAGALAERHPAAFVTKLIPTVKEEMFSDQIESSELRSHHAV
RQRCLSALAAVSVRASVVMESAPVLLDILSSAHADPDRFSVDEVVRACLSLQRIAERVQD
GEDTSRCFHDVIVLRLLSLALQAALQSDGSSGRRSPLVEEEVLSAMVPVISTACSRLQMF
AEQTASRASSLFLDGDVSFLPDNSFPPRVQLLQQQQEDSSWRQTQLVCLLMACVCSLPRS
VALSQEERLLSELEELSCSCRHPLSYTSAAKCFAGLVNKKPQGPCLDSLIQGVIKRVSSE
LDRPSSPLRTQAFTLLIWVAKALLLRYHPLFSALTDKLFTLLDDALLGPMAADSFSLLMS
DSADVLNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKANYLKALSNIVNKLPKQV
QVSELPALLSLLLEALTCPDEGVQLSTLSCLQPVLINPPQVLVLQLEALVSRLLALIGSP
AMKIRMASIRCVLALSRFPAHEVLPFRSRVLRALAPPLDDRKRLVRREAVQARAEWFLLG
SPGGR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagaaagtcctttgctgctgtctctggtggaggaatttgtctcaggacttcag
gacagcaaggcgaaggatactgcgacaggtgtcaaagatggacagtttaccatcctgcag
ctggtggaggcactcgggcagagcctgaccagctcccagcctcacactcgggcccgaggg
gtccagctgctctctgaggtcctccaggacaactacggggctctgacagagagagaagtc
gaactgctcctggccttctacgaaaaccgcctgaaggaccactatgtcatcacgccgccg
gtgttacgagggctgctggcgctgactaaatccaggaagctgcctcctggttcagctgtg
tcgatgctgaggtctgtgtttcaggatgttcacgtacagtctctgatgcttgcagagaga
gcgtgtgtctacaacatgctcatcaacctcatggaaaccagggaagacgaactgaagggt
ttgggcgcagattttgtttttggtttcgtccaatcaatggacggcgagagggatccccgc
aaccttctattggccttccagatcgccagaaacatcattctgcagggatacagcatgggc
aaattcacagaggagctgttcgaagtgacgtcctgctacttccccatagacttctccccg
ccacccaatgacccccatggcatcaccaaagaggaactgacccaggcgctgagggccgtc
ctcaccgggacccccaagtttgcagagttcctgttgccgctcatcatcgagaagctggac
tcagatgtccagagcgccaagctggactcgctgcagaccctggctgccagtgtgggacag
tatgagcacagagacttggctgagttcctggagggactgtggagctcgctgcgcagagag
gtgtttcagacatccagcgagaaaatcgaggcagcagccctcgccgccgtcaccgcactg
acttcctgtctctctcgctctgttctcaactctgactctgaagactccctcagctccttc
ctggacctgttgctcagagactgtaagcaccacctgtttgagcccgacttgaagctggtg
tggcccagcgttaagctactccaggccgcctgcagcacctcctacagggcagcccacatt
attacaagtgctgtcgtgccccctctagtggagcagtataacagcagaacgcagtgttcc
cacaggcggacgctgctggaggtggcacaacgattcatccagtcaactgcttcatgtcag
tctgtagatcacgatgagagcttgttgtctgcgtataaggactccctgtgcagcttggtg
ttctcagctctgtctgaaagtaactccagtctgcagatcacggccacctcggtgctcacc
tctctggcccaacaaccaggtctgctgctggactctgacatcgagctcgccgcggaccac
ctgaccaggctgctgctgacggatgaggatgagagagtcagtgtggccgtggtggagtgc
gccggagccttggccgagcggcaccctgctgccttcgtcaccaaactgatcccaacggtg
aaggaggagatgttttctgaccaaattgagtcgtctgagctgcgttcccatcatgcagtg
cgtcagcgctgcctgtccgcgctggctgcggtgtccgtccgggccagcgtcgtcatggag
agcgcgcccgtcctcctggacattctcagctcggcacacgcagatcctgatcgtttctcc
gtggacgaggtggtgcgcgcctgcctgagcctgcagaggatagcggagcgggttcaggac
ggcgaggacacgagccgatgctttcatgatgtcatcgtcctgcgcctgctgtctctggcg
ctccaagctgcgctgcaaagcgacgggtcatcgggtcgtcgtagtccgctggtagaggag
gaggtcctgtctgccatggttcctgttatcagcaccgcctgctcccgcctgcaaatgttt
gctgaacagacggcctccagggcctcgtctctcttcctggacggagacgtctcatttctg
cccgacaactccttcccaccgcgcgttcagctgctccagcagcagcaggaggattcatcg
tggcgtcagacccagttggtgtgtctcctcatggcctgtgtgtgttcgttacctcgcagc
gtggcgctatcccaggaggagcggctgctctcggagctggaggagctgagctgcagctgc
agacacccgctctcctacacgtcggctgccaagtgcttcgccgggctggtcaacaagaag
cctcaggggccttgtcttgacagtttaattcagggagtgataaagagagtgagcagtgag
ttggaccgaccctcctcccctctgcgcactcaggccttcacacttctgatctgggttgcc
aaggctctgctgctacgataccaccctttattttcagcgctaaccgacaagctcttcact
ctgctcgacgacgccctcctcggcccaatggctgctgacagcttctcgctgctgatgagc
gactctgccgacgtcctgaaccgcggttgccacgccgacgtccgcatcatgtatcggcag
cgcttcttcagcgagaactctgccaagctggtgcagggcttcaacgctgcgccgcaagag
aagaaagccaactacctgaaggctctgtccaacatcgtcaacaagttgcccaagcaggtc
caggtgtctgagctgccagctctcctgtctctgctgctggaggccttgacatgtcccgac
gagggcgtccagctgtccactctgtcctgcctgcagcccgtcctcataaaccccccgcag
gtcctggtcctgcagctggaggccctggtcagccggctgctggccctcatcggcagtcca
gccatgaaaatccgcatggcctccatacgatgcgttctcgctctctcccgtttcccagct
cacgaggtgttgccgttccggtcgcgtgttctgcgagcgttggctccgcccctggacgac
aggaagcggctggtgaggagagaggcggtccaggccagagcagagtggttcctgttagga
agccctggtggaaggtga
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