KEGG   Gambusia affinis (western mosquitofish): 122823317
Entry
122823317         CDS       T07758                                 
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A
  KO
K14005  protein transport protein SEC31
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122823317 (sec31b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gaf04131]
    122823317 (sec31b)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gaf02044]
    122823317 (sec31b)
Membrane trafficking [BR:gaf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122823317 (sec31b)
Secretion system [BR:gaf02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   122823317 (sec31b)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40 Beta-prop_EML Beta-prop_TEP1_2nd WDR55 TPR_Sec16 Beta-prop_EIPR1 EIF3I Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_WDR11_1st Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Prp18 MukF_M Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 122823317
NCBI-ProteinID: XP_043958730
LinkDB
Position
LG20:complement(17115887..17130176)
AA seq 1208 aa
MRLKEIQRTAHQAWSPAGHHPIYLALGTSAQQLDASFNTTAAIEIFEMDFADPSLEMELK
GSLPTTNRLHSIVWVNFGTAEYGIGGRLVGGSENGTLTVYNPEAIISSGAEAVVGESDKH
TGPVRALDFNPFQSNLLASGANDSEIYIWDLNNFSSPMTPGAKTQPVEDISVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRQPVI
QIWDLRFATSPLKVLENHKRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDVQWCPRNPALLSAASFDGRITVYSVMGGSLKAQQQSTADMISSSFDTMDPFGT
GQVLPPLQVPQPSVQETIIPPLKKPPKWVRRPVGASFGFGGKLITFENTKLPPVQSPQPV
PRQVFMSQVTTETEFLQRSRELQAALQSGSFNNYCQAKIQNAKSDAEQDIWKFLLVNFED
EARIKFLKLLGFSKDELERKISKCLGKNFQSNGHGVDAKDLAEKMQRLTTERSDEAAADA
RTSGSISPADFFSHTPKDNSTFQIPVSCDTDGLISQALLVGNFEGAVDLCLNDGRYAEAI
LLSISGGEDLLKKTQQKYLSKQKSSISMLISSVVTQNWRDIVQNCELDNWKEALAALLTY
AHPEDFASFCDTLGNRLEHEGTEKRCLQACLCYICSGNIEKLVECWALHRDCSSPLGLED
LVEKVMMLRKSIERLRNSEVAVQSPVLAEKLTCYAGILAAEGSLATAMAYLPDSSDQPGI
RMLRDRLYHAQGEAAAQQQPPNSFNRVGVPTANPTPAAQPPAPKAPIMSQFQPSAPPQVP
SQQQAPMPSIFTPQAPLPNPGPGLPSSTHTHPPSSTRPVVRPSYPQHPAPAPAFSSHQPF
QPQPVSSGGPFSPTGPSMPAASLAGPPLPPSSSTPGGMPPSPSPGVPPMGFVLSTSLPSG
MTPPSSQPGAPGPIYPGSFHSQGPAPPMASSSFPPIGAGYPQGGPGAPAAKPFPAPVVAP
PPTGPHDGWNDPPAVRTGPRKKKFPDNYTPPAPITAPVMGFPVEAPQPHNHAQVPPGAPQ
EPNVQLLQQLPAERVEQKEIPAEHMVLKTTFDSLVQRCQLAAGDPQTKRKLDDAGKRLGH
LYDKLREQSLSHNILSGLHEISRCVASQNYQRGLEIHTQVVSSSNFSEISAFMPILKVLM
TIANKLGV
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgaggctgaaggaaattcagaggactgcccaccaggcatggagtcctgctggacaccat
ccgatctacctggccttaggaacatcagcacaacagcttgatgcttctttcaacaccaca
gctgccatagagatatttgagatggattttgctgacccctctctggagatggagctcaag
ggttcattacccaccacaaacaggttgcacagcattgtatgggtaaatttcgggacggcg
gaatatggaattggagggagactcgttggcggaagcgaaaatggcacattgactgtatat
aacccagaggctatcataagttctggagcagaggcagttgttggggagtctgacaaacac
acaggaccagtccgtgcacttgatttcaacccgttccagagtaatcttcttgcctctgga
gcgaatgactctgagatctacatctgggatctaaataacttcagcagtccaatgactcca
ggagcaaaaacacagcccgttgaagacatcagtgttgtgtcgtggaacaggcaggttcag
cacatcctggcttctgctaaccccagtgggaaagcagttgtttgggacttgaggaagaat
gagcccatcataaagatcagtgatcacagcaacaggatgcactgttcgggaatgctgtgg
caccctgatgtggccacccagctggtgttggcctcagaagatgaccgacagccagtcatc
cagatttgggatcttcgctttgctacgtcaccccttaaagtgctggaaaatcacaaacga
ggaattctgtccatttcatggagccaggctgattcagagctcctcctgagtagcgctaaa
gacaataggatcctctgctggaatccaaacactggagaggtcatttatgagcttccaact
acaaaccagtggtgctttgatgtccagtggtgccccaggaatccggcccttctttcagca
gcgtcgtttgatgggagaatcacagtttattctgtgatgggagggagcttgaaggctcag
caacaaagcacagctgacatgatatcctcttcatttgataccatggatccctttggtacg
gggcaagtgctgcctcctctacaagttcctcagcccagtgtgcaggaaactattattcct
cctctgaagaagccacctaaatgggtgcgcaggccagtgggagcttcctttgggtttggt
ggaaagctgataacctttgagaacacaaagcttcctccggtgcaaagcccccagcctgtc
cccagacaagtgtttatgagccaggttaccacggagacagagttcctccagcgctccagg
gaacttcaggcggcgctgcagtcgggttctttcaacaactactgccaggccaagattcag
aacgccaagtcagatgcagaacaggacatatggaaattccttctggtcaactttgaggac
gaggcccgtattaaattccttaaacttttgggttttagcaaagatgaattggagagaaag
atttcaaaatgtctggggaagaattttcaatccaacggccatggagttgatgccaaagat
cttgcagagaagatgcaacgtctgacaactgagagatcagatgaagctgcagctgatgct
agaacctcagggtccatttcaccagcagacttcttcagtcatactccaaaggacaattcc
accttccaaatccctgtatcatgtgacactgacggtttgataagccaggcgctgctagtt
ggaaactttgagggagccgtggatttgtgtctcaatgatggtcgctatgctgaggccatt
ttgctatccatcagcggtggagaggatcttctcaagaagacacagcagaaatacctaagc
aagcaaaaaagcagcatatcaatgcttatatcatcagtggtgacccagaactggagggac
atcgtgcagaactgtgagctggacaactggaaggaagctcttgctgctctgctgacttac
gctcaccctgaagactttgctagtttttgtgataccctgggaaatcggctagagcacgag
ggcacagagaagcgctgcctgcaggcctgtttgtgttacatctgctctgggaacattgaa
aagctggtggagtgttgggccttgcacagagactgctcttcccctcttgggctagaggat
ctggttgaaaaagtaatgatgctacggaagtcgattgagcgcctccgcaacagtgaggtg
gccgtgcagagccctgtgctggctgagaagctgacctgctatgctggcatcctggctgca
gagggcagtctagctactgccatggcatacctgcctgacagctcagaccaacctggaatc
aggatgctgagagaccggctgtaccatgctcagggagaggctgctgcccaacagcaacct
ccaaactccttcaacagggtcggcgtgccaacagctaatcccactcctgcagctcagcct
cctgcaccaaaagcaccaatcatgagtcagttccagccatctgctccaccacaggttcca
tcacaacagcaggctccaatgccatcaatatttactcctcaagctccgcttcccaaccca
ggcccaggtctgccatcatccactcatacacatccgcccagttccacccgcccagttgta
aggccttcctatccgcaacatcctgctccagctccagctttctcttctcatcagccattc
cagcctcagcccgtttccagtggtggtcccttctctcccactggcccatcaatgccagct
gcaagcctagcagggcctccactgccaccatcctcctccacccctggaggaatgcccccc
tctcccagccctggggtgcctcctatgggatttgtactgtctacctctttaccctcaggc
atgacgccgcccagctcgcaaccaggagcaccaggtccaatataccctggcagcttccac
agccaaggcccagcaccccccatggcatctagttccttccctcctattggagctggatat
ccccaaggaggccctggagctcctgcagcaaagcccttcccagcccctgtagttgctcct
cctcctacaggaccacatgacggctggaatgatccaccagcagtacgcactggacccagg
aagaagaagttccctgataactacactccaccagcccccatcactgctcctgtgatgggt
ttcccagtggaggccccacagccacacaaccacgcccaagtcccacctggagcccctcag
gagccaaacgtacagctcctccagcagctgccagcagagagagtggagcagaaagaaatc
ccagcggagcacatggtcctcaaaaccacctttgacagtttggtgcagcgttgccagctc
gccgcaggagatcctcaaacaaaaaggaagcttgatgatgctggaaagcgtttgggacac
ttgtatgacaagctgagagagcagtcgctttctcacaacatcctgagtggactccatgag
atcagccgctgcgtggcgagccagaactaccagcggggcctggagatccacactcaggtg
gtcagcagcagcaacttcagcgagatctctgccttcatgcccatcctcaaagtgctcatg
accatcgccaacaagctgggcgtctaa

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