Gambusia affinis (western mosquitofish): 122823400
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Entry
122823400 CDS
T07758
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122823400 (jmjd1cb)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122823400 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
Tudor_KDM3B
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
122823400
NCBI-ProteinID:
XP_043958918
LinkDB
All DBs
Position
LG20:1542522..1644079
Genome browser
AA seq
2613 aa
AA seq
DB search
MVVMNDQVLEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNSAHMAGGRP
VGTTGNSQSHYTRAQANSPRPIMMSSGPSPKSSQGPLAPQQQSQSQQTQQTVSQSYHSPG
GSGREQREQRGGRSSRRKGSDSSLPEEDKDRREETTGRESKAKVKQTANKRRKGEEDEKK
AGLKRLKADMTSDLSESSDSENPHKRTTHSSCCSSSSSSSSSSSSSSSSSEPNSENELKT
RSSDVIKSAISKMEDEEKPVLKGPKMNDTSSFIRCLSPWAELRAAEDIKKSAVKDSGQIL
TNEEEELEAVTRITQSPLQQTSLIPDMVQSGAGENTKNTVKASSPSQTPSLSQLHGNNVI
DITDDAQATVHQESSEAVSALLASQKDESVALSPYLPLNPSPVSSPPVPTSPSPPEGCRR
AEVDSLMKPPGVTGGSVTLPKSLNGKVEFTPAEVMRPVSSIAETTPLVDKEKTVVSPHQL
HHQQQQLHEQQHTQQMQQYTAVQHGVPLSLSEGSSKPPQQQPPHHKTLTPTPDLAKSKVS
PRHTSSPVQKSQPPSSSHNQSYPSPNPADPLKAKPHPGLLDISKPKANTTPEVSKHKVLR
YPDSSPSPSARLPIKVDLVEPPRSGFKPVGLRSEAGGVSASGSTKSPLIIDKNETFTVYR
DPALVRSDADNSVTPPNSSNHVAAYLHPHLHPLHPPSPHSPCLTSPSHPHGASHLLAPPH
SSPLPHPHLLPPGMLPAMHPPPGSLFAGHPRLDSPGGLSHLALPHPAATHQQQFLQGHGG
AAGLSLFPIIWPYPNGTPPPYPPGLSLPPTAKWVHSENPITVNSEASLRRNTASPWLHQT
AGSSTDGLGLLNHIPVRPASADAHRPSAKINMHTNPSMSKTVMDVHKEDVEKKGFVDPVR
NLTFAQIKPDQTDRSRTPTGKDVHLHRLYLDPHSKTRLTNTQEVLHAADRTIKYKEENRQ
ILKESIEVAPFTAKILRPSDPGLDRDRSKEPAFPVRIPALASSSPKTSHTHLHVIQPEKS
SYYTTISNSVVNEPPRLYPSKEQSSYYDKVVGVSVAAAVQSQGSQSLVSYSSKASLSKPP
PLIKHQPEGGEGLAGKITEQLSQQAALIPHQHLTSMDRKDRHSPAASNTTSTSSSLSSVS
NHHQHQQHQLRAMPSLYRAPVYHPPTQLSLERKETAEREKERDKAGYGGRLSPPTLTPIQ
PVSLPTAGTKTSAEQQKPPTLVPELRDVKVHGIGAAVTSVASTISGDVMTDGWRGRDLIQ
ERGSVFCRDTDVLRGKPQSAMASVIVRPTTSVRYESPVGANKSGATVHREVSMSYPSRLP
GECLRMREAAQEAGGGRVIQVNANMDNVSVPYKATSMQSYQGPAGVSTTNSMCRSPVVFS
PAVDVQNKPPKSGYSAEFGNLKPGVGGWLPSLSGEAVDSHSISPGLSLPPSNSAATTLLA
QSNTSASSPITASNQPNLSSFVHLKKHKAALAAAQSKTNLPAGPASLPTGNTSSIVDPVE
KTPSHSSTPPPCSSGVSSGEISNTSCAPGSTTPGTSSPLPNGQSSGSTSLGSAQPSNYHK
LKKAWLTRHSEEDKTSTTASSSTKAEKLLTTTTSMCNATAMSDMIKPCTVNLSASTSSEV
DMNKDIGSRGERNLEGKNAGSTGGGGEEKKSSHLSRRGFKRSYDSGSESGGDDSDTSESK
MEGRAKRQSKPTYKKKQNDMAKRKGDHEKDDEDVKPNGIFRSAREKTKLKLASSNGIPRS
VLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRVVRSKKGEEPAHSPVFCRFYYF
RRLSFSKNGVIRMDGFSTPDQFDEEALALWVPGPLEDSHLDQITAKYILSYIGDKFCQMV
MTENTAASWIKKDAKLAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKER
RSCKDKELYGWLKCVKGQAHDHKHLMPTQIIPGKVLTELVTSIHSLRDKSNIPFKCPCST
KQNVLTKLPATNGVSQVLQNVLNHSNKLSLVKAEPGSQQNPEDGGAKAETNGGHGGGSSP
GSDHDSLPVTPPESQSPLHFLADLAEQKSREEKKENKQSVVPGKCVKEEKDGEGVLQQCK
NSVLVANSTEQGSTLRDLLTTTAGKLKLGSTDAGIAFAPVYSTAAQTGKDGRTMPNILDD
IIASVVENKIPASRQSITTKLSTKQDHMTPSNNSNPAHVGTDDTKAQRKKSATVPTVVLE
DSTNQYPDIPHSWLNNRRLLWLKDHRNQSNWKLFRECWKQGQPVLVSGIHKRLNVNLWKA
DSFNQEFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDGEPMVYRLKDWPSGE
EFMALMPSRYDDLMKNLPLPEYSDPEGSLNLASHLPSFFVRPDLGPRLCCAYGVAASQDQ
DFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDEGVRRRLKDSSEIPG
ALWHIYLNRDMDKVREFLHKLCKEQGMDVCLDQDPVREQSWYLSRKQRQRLLDEHGVQGW
TVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDFVSPEHVGRSFHLTQELRANKEEVNYED
KLQVKNILYHCVKEVVSSLKRNNSDIDLKEENS
NT seq
7842 nt
NT seq
+upstream
nt +downstream
nt
atggttgttatgaatgaccaggtgctagagcctcagaatgtggacccatccatggtgcag
atgacttttctggatgatgtagttcactcgttgctaaaaggagaaaacatcggcatcacc
tctagacgaaggtcgcgatcgagtcagaacaactctgctcatatggcaggagggagaccc
gtcgggaccactggcaactctcagagtcattacacacgagcccaggccaacagcccccgt
cccattatgatgtcatcaggacccagccctaagagctcccagggccccctggcccctcag
cagcagagtcagtcgcagcaaacgcagcagacggtcagccagtcgtaccactcaccaggc
ggcagcgggcgagagcagagagagcaacgcggcggccgctcctccaggaggaaaggctct
gacagcagccttccagaggaggacaaggaccggagagaggaaaccactgggagagaatct
aaggccaaggtaaaacagactgcaaacaaacgcaggaaaggtgaagaagatgagaagaaa
gcaggtctgaagagactgaaggctgacatgacttcagatctgtcagagagcagtgactca
gaaaacccacacaagaggaccacccactcatcatgctgctcctcctcttcatcatcctcg
tcatcttcgtcctcctcctcctcttcctctgagcctaactctgagaatgagctaaagact
cgcagcagtgatgtgataaaaagtgccatttccaaaatggaggacgaggagaagccagtg
ttaaagggacccaaaatgaacgatacctcgtctttcatcaggtgcttgtctccgtgggcg
gagctccgagcagctgaggacattaagaaaagtgcagtaaaggattcaggtcaaattctg
acaaatgaagaggaggaattggaggcagtgactcggatcacccagtctccactgcagcaa
acgtctctcatacctgacatggtccaaagtggagctggggagaacaccaagaacactgta
aaagcatcatctccatcccagactccatcactgtcccagctccatggcaacaacgtgatt
gacattacagacgacgctcaggccaccgtacaccaggagagctcggaggcggtctcggcg
ctgctcgcctcccagaaagacgagtcggtggccctctccccgtacctccccctcaacccc
tcccctgtctcatctcctcctgtacccacatccccctccccaccagaggggtgccgcaga
gcggaggtggactcactcatgaagccaccgggagttactggaggcagcgttacattgccc
aaaagtttaaacggcaaagtggagtttaccccagctgaggtcatgaggccggtctcatcc
atagctgaaactacgcccctggtggataaggagaaaactgttgtttctcctcatcagctt
catcatcagcaacagcagctgcatgagcagcaacacacacaacagatgcaacaatataca
gctgtccaacatggagttcctctttctctatctgagggttccagtaaacctccacagcag
caacccccccaccacaagaccctcactcccaccccggacttggccaaatccaaagtgagc
cccaggcacacatccagtcctgttcagaaatcccagccccccagcagctctcacaaccag
tcgtatcccagcccgaacccagcggaccctcttaaagctaaaccccacccgggcctcctg
gacatctccaaacccaaagcaaacactactcctgaggtcagtaagcataaagtcctgagg
taccccgactcctccccatccccaagtgctcgcttgcccatcaaggtggacttagtggaa
cctccacgctctggtttcaagccagtggggttgcggtcagaagcgggtggagtcagtgcg
agcggcagcacaaagagtccgctgatcatcgacaagaacgagaccttcactgtttacagg
gacccagcattagttcgctcagacgcagataactctgtcactccacctaactcctccaac
catgtggcagcctatctgcatccccacttgcaccccttgcacccaccctctccccactcc
ccttgcctaacatctccatcccatccccatggtgcctcccacctcctcgcccctcctcac
tcctcacccctccctcatccacacctcctgccccctggaatgctcccagctatgcatcct
cccccaggctctctgtttgcaggacaccctcggctggactccccaggcggtctcagccac
cttgcccttcctcacccagcagctacacatcagcagcagttcttgcagggtcatggtgga
gcagcaggtctcagtttgttccccatcatatggccttaccctaatggaacgccacctccg
taccccccaggactcagcctcccaccaactgctaaatgggtgcactctgaaaatcccatc
actgtgaattctgaggcgtctctaaggaggaacactgccagtccatggctgcatcagact
gctggtagttccactgacggtctcggtttactgaaccacattccagtcaggccagccagc
gctgacgctcaccgcccctctgctaagatcaacatgcataccaacccatcaatgtcaaag
actgtcatggatgttcataaagaagatgtggagaaaaagggttttgtggatcccgtcagg
aatttaacctttgctcaaataaaaccagaccagacagacagaagtcgtaccccaacagga
aaagatgtccacctgcaccgcctttacctggatccgcacagcaaaacccgcctgacaaat
acacaggaagtacttcatgctgcagaccggaccattaaatacaaggaggaaaatcgtcaa
attctgaaggagagcattgaggttgcgcctttcactgctaagattctgcggccctctgac
cccgggttggacagggacaggagcaaagagccagcattccctgtccggataccagctctt
gcctcttcaagtccaaagaccagccacactcacctccacgtcatccagccagaaaaaagc
agctactacaccacaatctcaaacagcgttgtgaatgagcctccaaggctgtatccttcc
aaggagcaaagttcttactatgacaaagtagtgggggtcagcgttgcggcagctgtgcaa
agccagggaagtcagtctttggttagttacagctccaaagcttctctctctaagcctcct
cctcttataaagcaccaaccagaaggaggagaaggtttagcagggaaaattactgagcag
ctcagccagcaggctgctcttatccctcatcaacatttgacaagcatggacaggaaggat
cgccacagtcctgctgcctccaataccacctccacgtcgtcgtccttgtcctcggtctcc
aaccatcaccagcatcagcaacaccagctcagggcaatgccatctctgtaccgagctcct
gtctaccatccacccacacagctgtccttggagcgcaaagagacggcagagcgagagaag
gagagggacaaagctggatatggtggacgtctgtcacccccgaccctcacacccatccag
ccagtcagcttaccaacagctggcaccaaaacatcagcagagcagcagaagcctcccacg
ctggtgccagaactcagggatgtcaaagtccatggaatcggtgctgccgtcacctcagtg
gcctccactatcagtggggatgttatgacagatggatggcgtggtagagatctgattcaa
gaaagaggaagtgtgttctgtagagacacagatgtgttgaggggtaagcctcaatcagca
atggcctccgtcattgtacgtccaactacgtcagttaggtatgaaagtccagttggtgct
aacaaatctggtgctacagtgcatagggaggtttctatgtcctacccttcgaggctcccg
ggggaatgtctgcgtatgagggaggctgctcaagaagctggaggaggcagagttattcaa
gtcaacgcaaacatggacaacgtttctgttccgtataaagccacctccatgcaaagctat
cagggacctgcaggtgtcagcactacgaactctatgtgcaggtcccctgttgtgttctca
ccagctgttgatgttcagaataaaccaccaaagtcaggatattcagctgagtttggaaac
cttaaacctggtgttggaggctggctgcccagcctctcaggagaagctgttgactcacac
tccatatcaccaggactgtctttgcctccgagtaattcggcagcaacaaccctacttgct
caaagcaacacctcagcttctagtcccattactgcctctaaccagcctaacttgtcctct
tttgtacatctcaaaaagcacaaggctgccttggctgcagcccagtctaagaccaacctc
cctgctggtcctgcatcattgcccactggaaacacttcatcaattgtggatccagttgaa
aagacacccagtcacagctccacccctccaccctgttctagcggagtctcctcaggtgag
attagtaacaccagctgtgcacctggtagcacaacaccaggcacgtccagtccgttacct
aatggccaatcttccggatcgacctcgctgggttcagcacagcccagtaactaccacaag
ctgaagaaagcctggttaacgcgacactctgaggaggacaagacttctacgacggcctcc
tcgagcacaaaagcagagaagctgctcaccaccacaaccagcatgtgcaatgctacagcc
atgtcagatatgatcaagccctgtacggtcaatctcagtgcctccacgtccagtgaggtg
gacatgaacaaagacattggaagcagaggtgaacgaaacctggaggggaagaatgctgga
tcaacaggtggaggtggagaggaaaagaaatccagtcatctctcaaggcgagggttcaaa
cgttcttatgactctgggtcagaaagtggcggagatgactctgacaccagtgaaagcaag
atggagggcagagcaaagcgccagtctaaaccaacctataagaagaagcagaatgacatg
gccaaaaggaaaggagaccatgagaaggacgatgaggatgtgaagcccaacggtatcttt
cgatcagctcgtgagaaaaccaagcttaaactggcgagcagcaatggcatccctcgttct
gtgctgaaggactggaggaaagtgaagaagctcaaacagacaggggagtcctttctgcag
gatgactcttgttcagaaattggacctaacctccagaaatgtcgagagtgccgggtcgtc
cgcagtaaaaagggggaggagccagcacattcccccgttttctgccggttctactatttc
agacggctatccttcagcaaaaatggagtcattcgaatggatggcttctccaccccagac
cagtttgacgaagaggccttggccttatgggtccctgggcccctggaggacagccacttg
gaccagataactgccaagtacatcctcagttacataggagataagttctgtcagatggtg
atgactgaaaacactgcagccagctggatcaagaaggatgcaaagctagcctggaaacgg
gcagtcagaggggttagagagatgtgtgacgcttgtgaagcaacactctttaacatccac
tgggtctgccagaagtgtggctttgtggtctgcctcgactgttacaaagccaaggagaga
aggagttgcaaagataaagagctgtatggctggttgaagtgtgttaaaggtcaagctcat
gaccataaacatctcatgccaacacagatcatccctggcaaagtgttaacagagctggtg
acctccattcactcccttagagacaaaagcaacatcccgtttaaatgtccgtgttccacc
aaacagaacgtcctcaccaagctcccagcaaccaatggagtgtcacaggtcctgcagaac
gtgctgaaccacagtaacaaactgtctctggtgaaggctgagcccggctcccagcagaac
ccagaggacgggggagccaaggctgagaccaacggaggccatggggggggcagcagtcct
ggcagtgaccacgacagtctacctgtcaccccacctgagtctcagtccccacttcacttc
ctggctgaccttgcagagcagaaatccagggaggaaaagaaagaaaacaagcagtcagtg
gtgccaggtaaatgtgtgaaagaggagaaagacggggagggagtcttgcagcagtgtaaa
aactctgtgctggtggctaacagcacagagcagggctccacgctcagagacctgctcacc
accactgcaggaaagctcaagctgggttctactgatgcaggaattgcctttgcacctgtt
tactctactgctgcacagactggaaaggatggccggaccatgccaaacatcctggatgac
atcattgcttcagtggtagagaataaaatccctgccagtcgccagagcatcaccaccaag
ctgtcgaccaagcaggatcacatgacccctagcaacaacagcaaccccgcccacgttggt
acggacgacaccaaagcacaaaggaagaagtcagccactgtgcctacagtggtgctggag
gattccaccaatcagtacccagacattcctcactcgtggttaaataacaggcggctgctg
tggctcaaagatcatcgcaatcagagcaactggaagctgttcagagagtgctggaaacaa
ggacagcctgttttagtgtcggggatccataagcgactgaatgtcaacttgtggaaggcc
gactcctttaaccaggagtttgcagaccaccagggagacctcctcaactgcaaagaccag
gtggtgtccaactctggaataaaggagttctgggatggatttgaagatattaccaagcga
ccgaagtccaaagatggtgaacccatggtctaccggctgaaggactggccgtctggggag
gagttcatggctctgatgccatcaaggtatgacgacctgatgaagaaccttcctttgcca
gaatattcggatccagaagggagcctcaacctcgcctcacacctgccatcttttttcgtc
aggcctgacctcgggccaagactatgttgtgcatatggcgtagctgcatctcaggatcaa
gactttggaactgccaacctccatgttgaagtatcagatgtggtgtctgtcctggtttat
gttggagtggcgaaagggaacggagtcctatccaaaactggagtgttgaagcgtctggag
gaggaagatttagacgagggcgttcgaaggcggctcaaggactccagtgagatacctgga
gctctgtggcacatctacctcaacagagacatggacaaagtccgggaatttctgcacaag
ctctgtaaggagcaaggtatggatgtgtgtctggaccaggacccagtcagagagcagagc
tggtacctgagcaggaagcagcgccagcgactcctggatgagcacggagttcaaggctgg
actgttgttcagttcctgggagactcggtcctcattcctgcaggggccatgcaccaggta
cagaatcttcacagctgcgtccaagtcatcaatgactttgtgtctcctgagcatgtgggc
aggtccttccacctgacccaggagctgcgcgccaacaaagaggaggtcaactatgaggat
aagctgcaggtgaagaatatcctgtaccactgtgtgaaggaggtggtgagctcactgaag
aggaataactctgacatagatctgaaggaagagaattcatga
DBGET
integrated database retrieval system
