Gambusia affinis (western mosquitofish): 122823477
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Entry
122823477 CDS
T07758
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122823477 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122823477 (nob1)
03051 Proteasome [BR:
gaf03051
]
122823477 (nob1)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122823477 (nob1)
Proteasome [BR:
gaf03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122823477 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
Carla_C4
DZR_2
DUF7129
HypA
Zn_ribbon_15
Zn_ribbon_8
DZR
Motif
Other DBs
NCBI-GeneID:
122823477
NCBI-ProteinID:
XP_043959080
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All DBs
Position
LG02:complement(449292..453187)
Genome browser
AA seq
456 aa
AA seq
DB search
MAPTLVEHVVADAGAFLKQAPLQEFGQNIYTLREVLDEIRDRTTRRSLAVLPYQLTFREP
NPEHIRTVTEFSKKTGDYPSLSATDIKVLALTYQLQLEHVGSQNIKVEPDLKVTIQSTQR
HPEAPVHIAGFHLPSRRTVDATNARHTRSEPSTQPDLDQFNSFQFWRQPLPSLQGDLLDL
LDPPDPDQQPDIPVSSETDEDFNSFRFWRDPVPSVDQDLLALLDLGGASFQGEERRAEPG
LADDQSDDDDGWITPSNIRQVKMESSDWTEAADVRVGCLTTDFAMQNVLIQMGLHVLSVG
GLVIRRARSYILRCHACFRTTSNMSKAFCPHCGNQTLKKLAVTVGEDGSLQMHFSKNPKV
MNPRGTRYSLPLPRGGKHATDPHLVEDQRFPQQRLSRKARQKTDVFDPDYVAGVSPFCQN
DVYSRAANLQIHDGQSGAGRRRANPNAARRKFLKKK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccctggtggagcatgttgtcgcagacgctggagcgtttttaaagcaagcc
ccgctgcaggagtttggccagaacatctacaccctgcgggaggttctggacgagatccgg
gacagaaccacccgaaggagtcttgccgtcctgccgtaccagctgacattcagagagccg
aatccggagcacatcagaaccgtgacagagttctccaagaagacgggcgactaccccagc
ctgtccgccaccgacatcaaggttctggctctgacctaccagctgcagctagagcacgtc
gggtcccagaacatcaaggtggaaccggacctgaaggtgaccatccagagcacacagcgc
cacccagaggctccggttcacatcgcgggcttccaccttccctccaggaggaccgtggac
gctacgaatgccagacacactcggtcagaaccatccactcagccggacctggaccagttc
aacagcttccagttctggaggcagccgctgccgagcctccagggagacctgctggacctg
ctggatccgcccgacccggatcagcagccagacatcccagtgtcctcagaaacagatgaa
gacttcaacagcttccggttctggagagacccggttcccagcgtggaccaggacctgctg
gccctcctggatttgggcggagcctcattccagggggaggagaggagggcggagcctggg
ctggcagacgaccaatcagacgatgacgatggctggatcacccccagcaacatcaggcag
gtgaagatggagtcgtctgattggacggaggcggctgatgtcagagtggggtgtctgacc
accgatttcgccatgcagaacgttctgatccagatgggcctccatgttctgtccgtcggc
ggcctggtgatccgccgcgcccgcagctacatcctgcggtgccatgcctgcttcaggacg
accagcaacatgagcaaagcgttctgccctcactgtggcaaccagaccctgaagaagctg
gcggttaccgttggcgaggacggcagcctccagatgcacttctccaagaaccccaaggtc
atgaaccccagaggaaccaggtactcgctgccgctgcctcgcggcgggaagcacgccacc
gacccccacctggtggaggaccagcgcttcccgcagcagcggctctccaggaaggcccgg
cagaagacggacgtgttcgacccggactacgtggccggagtgtcgccgttctgccagaac
gacgtctacagccgcgccgccaacctgcagatccatgacgggcagagcggtgccggccgc
aggcgggccaaccccaacgccgcccgcaggaagttcctcaagaagaagtga
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