Gambusia affinis (western mosquitofish): 122823481
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Entry
122823481 CDS
T07758
Symbol
sec24c
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122823481 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122823481 (sec24c)
Membrane trafficking [BR:
gaf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122823481 (sec24c)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
zf-Sec23_Sec24
Sec23_helical
Gelsolin
Motif
Other DBs
NCBI-GeneID:
122823481
NCBI-ProteinID:
XP_043959081
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Position
LG20:15440644..15461141
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AA seq
1119 aa
AA seq
DB search
MNVNQHTPMASPYGQPQPGYSQPGYAPLDGGYPAPYGPYNGPASAYQPGVPPQGYSPFTS
FPSKAVAANPVSDLSSPLDLGQAQGPPTSAPPPVSAPQQYNQYSHSQGDMQNGPPPMTQA
PPRPAAAQPYNQGHMNMTGPHPSYPQHYGPPPTMQQVTSQMTGMQITSGPPTPAGPGYAP
PHSSQPPISTYSAPPQPSYTQAPPPASSAPTQPPPCSXPPPPDSSRPPTSQQQFTSSAPP
PPSQQTFPPSSFSGLPTRPQAAPVSQPQPPFPAAPPSLSSAPPPGSQSGFAGGPPPIAQG
SFPPHLTQPSSQPGSFPPPGPPPTAAVSGQYPPMSQPQQPPAAQPSLYHSGPPPPRAQMP
PTSMGQSNHLPPGPQGPPGQQGPPGPLQQPPVQPGMQTGYPPQQNGAFGQARSPQPGYAG
PYPGQPNYGAPAPAPTSAPAPQKRLDPDAIPSPQASDMPAVQKSRHRIDPDAIPSPIQVI
EDDKAKTNEPFTTGVRGQAPPLVTTNFQVKDQGNASPRFIRCTAYNMPCTSDMAKQSQVP
LAAVIKPLATLPPDEAPPYVVDHGESGPIRCNRCKAYMCPYMQFIEGGRRFQCGFCSCVT
EVPPHYFQHLDHTGKRVDCYDRPELSLGSYEYLATVDYCKNNKLPQPPAFIFLIDVSYNA
VKSGMVSIVCNELKSLLDLLPRQNPEVDSVIRVGFVTYNKVLHFYNVKSTLAQPQMLVVS
DVSDMFVPLLDGFLVNVNESRQVIESLLDQIPEMFADTRETETVFGPVIQAGLEALKAAD
CAGKLFVFHTSLPIAEAPGKLKNREDKKLIGTDKEKTLFQPQVGVYNNLAKECVAQGCCV
DLFLFPNQYVDVATLGVVPVSTGGSIYKYTYFQAQTDQERFLNDLRRDVQKQVGFDAVMR
VRTSTGIRATDFFGSFYMNNTTDVELAGLDCDKAITVEFKHDDKLSEETGALMQCAVLYT
SCSGQRRLRIHNMAVNCCAQLADLYRNCETDTIINYFAKYAFRGVANNTTKAVRDTLVNQ
CAQILACYRKNCASPSSAGQLWVGASLSAGAAAQHLHELQPDRSNMMKKGGVYLMETGLH
LFLWVGASVQQELLLNIFGTPSFSQIDPNMISLPVHHDT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccaatggcctctccctacggccagccccagcctggctac
tctcagcccggctacgcccccctggacggaggataccctgccccctatggaccttacaac
ggccccgcttcagcctatcagcctggcgttcctccacaaggttattctcctttcacaagc
tttccctctaaggctgtggcagccaacccagtctctgacctctcctctcctcttgactta
ggtcaggctcagggtcctcccacctctgcaccacctcctgtctcagcccctcaacagtat
aaccagtacagccacagtcagggggacatgcagaatggacccccacctatgacacaagca
ccacccaggcctgctgcagcccagccatacaaccagggacatatgaacatgaccgggccg
cacccttcctatccgcaacactatggacctccacccacaatgcaacaggtcaccagtcag
atgacggggatgcagatcacgtccggaccgccaaccccagcagggccaggatatgctcct
cctcacagctcccagccccccatcagtacctactctgccccaccccagccctcctacacc
caggctccgcctcctgcctcatctgctcccacccagcctccaccctgcagcnttcctccg
cctcccgactcgtctcgtccccccacctcccagcagcagttcacatcttctgctccacct
ccgccctcccagcagactttccccccatcctctttctcgggtctcccgactcggccccaa
gctgcgccggtatctcagccgcagccgcccttccctgctgctccgccctctttgtcatca
gcacctccacctggtagccaatctggcttcgctggcggcccgcctccgatcgctcaaggc
tcctttccacctcacctgacacagccttcctctcagccagggtcttttcctccgcctggg
cctccccccaccgcagcggtttcgggtcagtacccccccatgtctcagccacagcagccc
cctgcagcccagccgtctctgtaccactcagggccgccgcctcccagggctcaaatgcct
ccaacatctatgggacagagcaaccacctgcctccaggaccgcagggtccaccgggtcaa
caggggcctccggggcccctgcagcagccccctgttcagcctggcatgcagacaggatac
cctcctcaacaaaatggtgcgtttggccaggccagaagcccccagcctggatatgcaggt
ccgtatcctggacaaccaaactacggggccccggcaccggctcccacctctgctcctgct
ccacagaagagacttgatccggatgctattcccagcccgcaagcgtctgacatgccggct
gtgcagaaatcaagacatagaatagatccagatgctatccccagcccaatccaggtaata
gaagacgataaggctaagaccaatgagccattcacaacaggggtcagaggtcaggctcca
cctctagtcacaaccaactttcaggtcaaagatcaaggaaatgccagtcccaggtttatc
cgctgtacggcctacaacatgccttgtacgtccgacatggccaagcagtcgcaggtcccc
ctggctgctgtcatcaagcccctcgccacgctgccccccgatgaggcccctccatatgtg
gtggaccacggcgagtccggtccgatccgctgcaaccgatgcaaggcctacatgtgtccg
tacatgcagttcatagagggaggtcgccgcttccagtgtggcttctgcagctgtgtcaca
gaggtgcctccacattacttccagcatctggatcacaccgggaagagagtggactgctac
gatcgtccggagctgtcgctgggctcctacgagtacctggcaactgttgactattgcaag
aacaacaagcttccgcagcctccagccttcatcttcctcatcgacgtgtcctacaacgca
gtgaagagcgggatggtcagcatagtctgtaacgagctcaagagtctgctggatcttctg
cccaggcaaaacccggaggtggattctgtgattcgggttggtttcgtcacctacaataag
gtgttgcatttctacaacgtgaagtcgaccctcgcccagccccagatgctggtggtgtca
gacgtgtcggacatgtttgtgccgctgctcgacggcttcctggtgaatgtgaacgaaagc
agacaagtcatcgagagtttgttggatcagatcccagagatgtttgctgacaccagagag
acggagacggtctttggacccgtcatccaggcgggactggaagcattaaaggcggctgac
tgtgccgggaagctgtttgtgtttcacacctctttgcccatcgcagaagctcctggaaaa
ctgaaaaaccgagaagataagaagctaatcgggactgacaaggaaaagactctgtttcag
ccgcaggtcggagtctacaacaacctggctaaggagtgtgtggctcagggctgctgcgtg
gatcttttccttttccctaatcagtacgtggatgtggcaacgttaggagtggttcctgtc
tccactggaggctccatctacaaatacacatattttcaggctcagacagatcaagagcga
ttcctgaacgacctgaggcgagacgttcagaaacaagtcgggtttgacgccgtgatgagg
gtccggacgagcacagggatccgggctacagatttcttcggatcgttctacatgaacaac
accacggatgtagagctggcggggctggactgcgacaaggccatcactgttgagttcaaa
cacgacgacaagctcagcgaggagacgggagcgctcatgcagtgtgccgttctgtacacc
agctgcagcggtcagaggcgcctgcgcatccacaacatggcggtgaactgctgcgcgcag
ctggccgatctctaccgcaactgtgagaccgacacaatcatcaactacttcgccaaatat
gctttcaggggtgttgcaaacaataccaccaaggctgtgagggacactctggtcaaccag
tgcgctcagattctggcctgctatagaaagaactgtgccagtccatcatctgctggtcag
ctgtgggtgggagccagcctgtcagcaggagctgctgctcaacatctgcacgagcttcag
ccagatcgatccaacatgatgaagaaaggcggagtttacctgatggagacggggctccac
ctcttcctgtgggtgggagccagcgttcagcaggagctgctgctcaacatcttcggcacg
ccgagcttcagccagatcgatccgaacatgatcagtctgcctgttcatcatgatacatga
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