Gambusia affinis (western mosquitofish): 122823570
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Entry
122823570 CDS
T07758
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04514
Cell adhesion molecule (CAM) interaction
gaf04517
IgSF CAM signaling
gaf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122823570
04517 IgSF CAM signaling
122823570
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122823570
09142 Cell motility
04810 Regulation of actin cytoskeleton
122823570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122823570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122823570
04515 Cell adhesion molecules [BR:
gaf04515
]
122823570
04090 CD molecules [BR:
gaf04090
]
122823570
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122823570
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122823570
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122823570
Cell adhesion molecules [BR:
gaf04515
]
Integrins
Integrin alpha subunits
122823570
CD molecules [BR:
gaf04090
]
Proteins
122823570
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
122823570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
vWA-TerF-like
Copine
Motif
Other DBs
NCBI-GeneID:
122823570
NCBI-ProteinID:
XP_043959271
LinkDB
All DBs
Position
LG20:21222101..21237904
Genome browser
AA seq
1140 aa
AA seq
DB search
MDWIITVALFSSVLKAAVGFNVDSGSWKTLSQSDESFGYQVVQRQSDLLVSAPLLQYGGN
KRGRIYQCDTGGSCSNLVPLEQRAAVNMSLGLAMANDPLTQNTMACGPTIPRDCKTITMY
NGLCYEIGQLDTFEKSYPSTTEECRTQADIAFLLDGSGSVAPDDFIRMKIFVKNLIKTFV
GRDTQFAISQFSYFPTTHYYFNTLSTSNWESEIDNINQLGGGTNTARAIQNVVDDVFSPQ
KGSRSNVKRILIVITDGESHDRQNLPAATQSADRKNILRFAIGVGNAFTSTSAKEELIEI
ASQPADNFVFQVGSFDALDKIRDNLQAKIFSIEGSQSGGETLKQEMSQEGFRAAYVSGYI
QMTMVGANQWKGGYKKYLLSNVLNNATFEPLFIEPDSYLGYSMAVAKTNYGPLTILGAPR
NQHKGLVMTVFNEQQRDQIRPFERQTGEYFGAEVCAMDVDSDDLTDLILISSPMYKDVDR
EGRVYVCELSRLSVICYFDNPSQITTLRGDASVRGRFGSSLAVLPDINADKFNDLAVGAP
LENDGQGSIYIFRGEGGRKINPTYSQKIAASTVESGLKLFGISISQSSYDQSGDGLPDLA
VGSKGKVVILRSRPVVTVTATVTFNPNLIPTQNPVCSKPLPSKATVCFIMSKLSNVNEAK
ARINFTLTLDANRKIPNNRAEISKDVRHKSGSLNLFLDREECTVVDFFIESCPEDALNPL
NNELRFTFDGLPSGSNPRPSLSPQVKTTTFHPIGFEISCGADEVCEDNLKVDFNFTKSSV
VKVGIDELLDVTVSVKNRGENSYSSRIILTYPVGLSYRKVTPLEGRIECNSVDSEDGVTK
GKTVCSIDKPIFKSNSMAIFIVSYGFNTNSDLSRKIEVTANATSDNKLHSPSSEVYKNKG
IDVKYSVFVTIESSLSYNNFTFGENAVQKPLEQKIKVFNTIRPLNLTVVIKVPVKLGDKD
IWMDMSSFQIPGCQSSRDEKPTVTDFVDKIKENKILDCTVAKCRVFRCSEFMERNKDKTY
TISANISSGWIEQIGLSSAKFLLTSTASLEYDEDQYIFFSTTSNNDPPVHKIEAEVEVFP
KPDFTKEIIGGSLGGLAFLALLTAGLYKAGFFKSKYNQMISENEGGEAEPGAEGAAPTNE
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggattggataattactgtggcacttttcagttcagtgctaaaagctgcagtcggcttt
aatgttgattctgggtcttggaaaaccctgagtcagtctgatgaaagttttggctaccag
gtggtgcaaagacaatcggatctgcttgtcagcgccccactactacagtatggagggaat
aaaaggggacggatatatcagtgcgacacaggaggcagttgcagcaatcttgttcctcta
gaacaaagagctgctgtcaacatgtctcttggtttggcgatggcaaatgatccattaaca
caaaacacaatggcctgtggtccaaccattcccagagactgcaaaactatcaccatgtac
aacggtttgtgctatgagatcggtcaacttgatacgtttgaaaagtcttacccgtctaca
actgaagagtgtcgaacccaagctgacattgcgtttctgctggatggctcaggcagtgta
gctcctgatgattttatcagaatgaaaatttttgtgaaaaatctgatcaaaacattcgtg
ggaagagatacacagtttgccatctcccagttttcctattttccaacaacgcattactac
tttaatactttaagcacttccaactgggaatctgaaattgacaacatcaatcagttaggt
ggaggaacaaatacagctagagccatccaaaatgttgtggatgacgtcttctcaccacaa
aaaggttccaggtcaaatgtgaaaagaattttaatagtgattacagatggagagtctcat
gatcgccaaaacttaccagcagcaacacaatcagctgatcgaaagaacattcttcgattt
gctattggggtgggaaacgcattcacaagtacaagtgcaaaagaagagctcatagaaatt
gcatctcaacctgctgacaattttgtgtttcaagtgggaagctttgacgctcttgacaaa
atacgggacaacttgcaggccaaaatcttttctattgaaggatcgcaaagtggtggagag
acactgaaacaggaaatgtctcaagaaggcttcagagcagcttatgtgtctgggtatatt
cagatgactatggttggtgctaaccagtggaaaggaggctacaagaaatacttgcttagt
aatgttttgaataacgccacatttgagccattgttcattgagccagacagttaccttggt
tattccatggctgttgctaaaaccaactatggcccactgacaattcttggtgctccaaga
aaccaacacaaaggacttgttatgacagttttcaatgaacaacagagagatcaaataaga
ccctttgaacgacagactggtgaatattttggggctgaggtttgtgccatggatgtagat
tctgatgacctgactgatctaatcctcatatcctctccgatgtacaaagacgttgacaga
gaaggacgagtttatgtctgtgaattaagtcgtttgagtgtcatttgttattttgataat
ccatcccaaataaccacactaagaggtgatgcgtctgtcagagggaggtttgggtcgtct
cttgctgttctgcctgatataaatgcagataaattcaatgatttggccgttggagctcct
ttggagaatgatggccaaggcagcatctacatattccgaggagaaggaggaagaaaaata
aatcctacttactcacagaaaattgctgcatctacagttgaatcaggtctgaagttattt
ggcatctcaatcagtcagtcttcctacgatcagagtggtgatggacttcctgacttagca
gtgggttcaaagggaaaagttgtcatactcagatccagaccagttgtaacagtgactgcc
actgtgacattcaacccaaatctgatcccaactcaaaacccagtctgttcaaaaccactg
ccaagcaaggctactgtctgctttattatgagcaaactgtctaatgtgaatgaagctaaa
gcacggattaatttcactttaacattggacgcaaatcgtaagataccaaacaaccgagct
gagatcagcaaggatgtgagacacaagagtggatctcttaatcttttcttggatagggaa
gaatgcactgttgtggacttttttattgagtcttgtccagaagatgctctcaatccactc
aataatgagctcagattcacgtttgatggtttgccttctggctcaaacccaagaccaagc
ctttctccacaggttaaaaccacaacatttcatcctatcgggtttgagatcagctgtgga
gctgatgaagtgtgtgaagataacttgaaggtggattttaacttcaccaaatcctcagtg
gttaaagtcggcatagatgaacttttggatgtgactgtctctgtgaagaacagaggagaa
aactcgtacagcagtcgcattattctcacataccccgttgggctctcctacaggaaggtt
acacctctggaaggaagaattgagtgcaactccgttgacagtgaggatggtgtaacaaaa
ggaaagacagtctgtagcatcgacaaaccaatattcaaaagcaactctatggcaatcttc
atcgtctcatatggtttcaacaccaacagtgatcttagtagaaagatcgaagtgactgcg
aacgccactagtgacaataaacttcactccccttccagtgaagtctacaaaaacaaaggc
attgatgtcaagtacagtgtttttgtcacaattgaaagctccctcagctacaacaatttc
acatttggtgaaaatgctgttcagaaaccactggagcaaaaaataaaggtttttaacact
atcagaccactaaatttgactgtggtgatcaaagttcctgtaaaacttggtgacaaagac
atctggatggacatgagcagctttcagattccaggttgtcagagcagcagagatgaaaaa
cctactgtcactgattttgttgataaaataaaagaaaacaaaatattggactgcactgta
gcaaagtgcagagtgttcaggtgctccgagttcatggaaaggaacaaggacaaaacgtac
accatctctgcaaacatcagctcaggatggatagaacagatcggactttcatctgctaag
ttcctcctgaccagtacagccagtctagagtatgatgaggaccagtatatcttcttctct
acaacctctaataatgatcctcctgttcacaagattgaagcagaggtggaagtgtttcct
aaaccagatttcactaaagagattataggcggatctctgggagggttggcctttctggct
ctacttactgccggtctgtataaggctggatttttcaagagcaaatacaaccagatgatt
agtgagaatgaaggaggagaagcagaaccaggagctgaaggagcagctcccacaaatgaa
tga
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