Gambusia affinis (western mosquitofish): 122823622
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Entry
122823622 CDS
T07758
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122823622 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122823622 (lrrc4bb)
Cell adhesion molecules [BR:
gaf04515
]
Immunoglobulin superfamily
NGL family
122823622 (lrrc4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
DUF7617
Ig_6
Big_6
Motif
Other DBs
NCBI-GeneID:
122823622
NCBI-ProteinID:
XP_043959373
LinkDB
All DBs
Position
LG20:complement(21829499..21839014)
Genome browser
AA seq
737 aa
AA seq
DB search
MRLVMVTSPCTPSPVLWLVQLLLWFHHHGPQLTEAAPPCPNPCTCSNQASRVICTRKSLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPTQAFEYLSKLRELWLRNNPIETLPAFAFNRVPSLRRLDLGELRKLGFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVTIIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQTHFVCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVESVEPREEENSARQYVNETFVGSPKPPG
HGGVDGLSSSTISPSLSTLSPLSPRTTENSVTVSLMDVTNIPGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTINSGTGT
EGTLRIHHPEVVNLPNIGRTDTLNHYYKTHHFNNNVMGLSITEGMGPCGILNSKNQHGQD
NPISCTSVPISTSNMLSASGNGTNTSSMSPPLPMSLPMPTMGLHGSIKGFMGQNQNPQME
PLLFKGSSKENVQETQI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgtcatggtgaccagcccctgcaccccttcccccgtcctctggttggtccag
ctcctgttgtggtttcaccaccatggaccccagctgacagaggcggcaccgccatgcccc
aacccctgcacctgctccaaccaggcgagccgggtcatctgtacaaggaagagtttggat
caaatcccagacagcatttcagaaaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacattcaagcatctgcggcatctagaaattctccagctctcc
aaaaaccacatccggcagattgaggtgggagctttcaatggcctccccaacctcaacacg
ttggagctttttgataaccgtcttacagtggtaccaactcaagcttttgagtacctcagc
aaactaagagaactatggctacgaaacaaccccattgagacactgccagcctttgctttt
aaccgcgttccctcattaagacgtctggatctgggggaactcaggaagttgggtttcatc
tcagaggctgccttcgaaggtctggtaaatctgcgttttttgaatcttggcatgtgcggc
ttgaaggacatccctaaccttaccccgcttgttcgacttgaggagttggagttatcaggg
aatcagctggggattgtccgtcctggatcatttcagggactggtgtcacttcgaaagctt
tggctgatgcactccagagtgactatcattgaacgcaatgcttttgacgacctcaagaac
ttggaggagctcaacctttcccacaattctctgcattctctgccccatgatctgttcacc
cctttgcaccagttggagagagtacacctcaatcataatccttgggtttgcaactgtgac
gtcctgtggctcagctggtggcttaaagagacagttcccagcaacaccacgtgttgtgct
cgttgccatgccccgccaggcctgaaagggaagtacatcggggaactggatcagacccac
tttgtctgctatgctccagtgattgtggagccgcccactgatctgaatgtcaccgaaggt
atggccgcagagctgaaatgccgtaccggaacctctatgacctctgtgaactggttcacc
ccaaacggcaccctgatgacacacggatcataccgagttaggatctcagtgcttcatgat
ggaacactgaacttcacgaatgtgaccgtgcaggacaccgggcagtatacctgcatggta
accaactctgctgggaataccactgcaaccgctgtgctcaacgtctctgcttctgatcct
agtaacagctacagctatttcaccactgtcacagttgagtcagtggagccaagagaggag
gagaactcagcaagacagtatgtgaacgagacctttgttggttcccccaagcctcctggt
catggaggggtagacggtctatctagcagcactatatcaccatctttgtctactctgtcg
ccactgtcacccagaactactgaaaattcagtgactgtctctctaatggatgtaactaac
attccaggcctggatgatgtaatgaaaacaactaagatcatcattggttgcttcgttgct
attacttttatggcagcagtgatgctggtggtcttctacaaactccgtaagcaacaccaa
ctacacaaacaccacggccctgccagagcaattgagattgtcaacgtcgaagatgaaatt
ggagctggggctggaagtggcatctctggcggttcgacgataaattctgggactggtacg
gaaggaaccttgaggatacatcacccggaagtagtcaaccttcccaacatcggtcgcacg
gacaccctaaaccattactacaagacacatcatttcaacaacaatgtgatgggtctcagt
atcaccgaggggatgggaccatgtggaatcctcaacagcaagaaccagcatggccaggac
aaccctatctcctgcacatcagttccaatctctacatcaaatatgctctctgcatcaggc
aatggcaccaacaccagctccatgtccccaccgctgccgatgtctctccccatgccaact
atgggcttacacggatcgatcaagggtttcatgggccaaaaccagaacccccaaatggag
ccgctgctcttcaaggggagctccaaggaaaacgtccaagagacccagatctaa
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