Gambusia affinis (western mosquitofish): 122823679
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Entry
122823679 CDS
T07758
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122823679 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122823679 (usp42)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122823679 (usp42)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122823679 (usp42)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122823679 (usp42)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122823679
NCBI-ProteinID:
XP_043959489
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All DBs
Position
LG20:2144032..2158905
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AA seq
1182 aa
AA seq
DB search
MTIVDRLSEKSDHESVGFNRSFTSGDVGMDGSCSSSWAVGPSMPGDSPRLKPSGGCLGPT
PGAAIYNGTPASMDRPKDQVMSSEDGIELPQKVLFPPERLSLKWIQVHRIGAGLQNMGNT
CFLNSALQCLTYTPPLVNFMLSREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIGV
LNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLRS
RVKCLNCKSVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVTA
SKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPEYLELRPFMSQSQGEPQIYGLYAVL
VHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSCNVKKTGE
FSNVSHNPGMSGQSSPRPVVTPRIHTAVHHGNTGFIGPQLPPHMTKNTLHVNGNGSLRDY
PSNSKASSSAVGKPSHGLASSSISHSISRPTSIPDQEKRQKLSFFIGQGKQNRASSSSTY
SHPSSASSSSSSSLSSSQSTSDVHFVPRQLNHFNGTPSSNGDQPAGGNGSSLLVPYSQES
SEESDQENSTTQDAGCISKPQTKGTNGTGDVCASSSKNTNGEIDVCHNSSEVNGSTSEFT
KTNQNGQFNGLHKVNGHNIHDKGSIHNQDSSAVNAVANGLGSDHNEPNSVLCDPSKELVD
PASSQTCSAQSATPAANEREPLSATVDERAKTLPEPLPPPHHTSSSAVSSSPSATTSKTH
AVGPRDLSGFPSEPVCCQSANGISTAAQNISKTEEEVKDSSQTNGPSARPDGGTENKGQS
QSKPGSKGHERQSSHDRDRDRFYSDYSKDRDRHYRDRSPPRESYSDRHRYRRDYRDHHRS
YRDRFPPERSYWDLNRRKERLGSHSWEHDRDRRSYHSSHYYHKYDGRHERRGYPQPQESH
SYWRSQKDGRESWAMKDKRNGWDREERSSSPAATALETNKSKVSPPLDRLCNFNSTLKRE
ESSDKRPAAHLRKEREDSSEGRHSKKHKKSKKKKKSKDKDRHHESSSDPDSDRATESRKK
KKKKRRHRDSDSDSGRGHGNRGSKERENRKRHHSDTKDSRYDQDFLPEKRQRTDCSDGSR
DQPLPPQHHALSNHSAHQHLNGHTGDGRTNGDFHRYSSGLKQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagattgtcagaaaaatctgaccacgagtcagttggatttaaccga
tccttcaccagtggagacgtggggatggacggcagttgttccagcagctgggcggtgggt
cccagcatgcccggcgactctcccaggctcaagccttcaggaggctgcctgggtccgacc
cctggtgctgccatctataacggcacacccgcctctatggaccgccccaaggaccaagtg
atgagcagtgaagatggcatagagctgcctcagaaggtcctgtttcctccagagcggctc
agcctgaagtggatccaagttcatcgcattggtgccggcctgcagaacatggggaacaca
tgcttcctcaactcagccctgcagtgcctcacctacactccaccgcttgtcaacttcatg
ctgtcaagggagcactccaaaacctgtcatgagcctggattctgcatgatgtgcaccatg
caaaaccacatcattcaggtttttgctaactctgggaatgtcattaagcccatcggtgtc
ctcaatgagcttaaaagaattgcaaagcacttccgctatggaagccaggaggatgctcat
gagttcctgcggtacacagtggacgctatgcaaaagtcctgcttacctggaaccaaattg
gacaggcaaacgcaggccaccactttcatccatcaagtgtttggagggtacctcaggtcc
agagtgaaatgtctgaactgcaaatcagtttctgatacatttgatccttttctggacatc
acgctggaaattaagacggcacccagcgtctccaaagctctggagcaatttgtcaaacca
gaacagctggatggagaaaatgcctacaagtgcaccaagtgcaaaaaaatggttacagcc
tcaaagagattcacaatccaccgcagtcctaatgtgctcactctctcactaaaacgattt
gcaaacttcactggaggaaaaatcacaaaggatgttaaatatccagagtacctggagctg
cggcccttcatgtcccagtctcaaggagagccccagatctacggcctgtacgctgtgctg
gtccactccggtttcagctgccacgctggccattacttctgctacattaaggccagcaat
ggtcagtggtaccagatgaacgactcgtctgtctctgtgagcgacatccgctcagtcctc
aaccaacaggcctacgtccttttctacattaagtcgtgtaatgtgaagaaaactggggaa
ttcagcaatgtgagccataacccaggtatgtctggtcagtcgtctccccggccggtggta
acccctcgcatccacaccgccgttcaccatggcaacactggcttcatcggcccccagcta
ccaccacacatgaccaagaacactctccatgttaatgggaatggatctctgagggactat
cccagcaattctaaggccagcagcagtgcagttggcaaacccagccatggcctggcttct
tcctcaatttcccactcaatcagtcgacccacatccatcccagaccaagagaaacgacag
aagctttcgttttttattggacaaggcaaacagaaccgagcatcttcctcatctacctac
agccacccatcctctgcaagcagctcctcctccagctcgttatcttcctcgcagtctacc
tcagacgttcactttgttccgcgtcagctaaaccactttaacggcacgcccagcagtaac
ggcgaccaacccgccgggggcaacgggtcgtctttactggtgccgtacagtcaagagtcc
tctgaagaatccgaccaggagaacagtaccactcaggatgctggctgcatatccaagcct
cagactaagggaactaatggaacaggagatgtgtgtgcctcttcttctaaaaacacaaac
ggtgaaatagatgtctgtcataacagtagtgaagtgaacgggtcaacctctgaatttaca
aaaacaaaccaaaatggacaatttaatgggctccacaaagttaatggacacaacatacat
gacaagggatccatccataatcaggacagttcagctgtgaatgctgttgccaatggactt
ggcagtgaccacaatgaacccaattctgttctttgtgatcccagcaaagagctcgttgac
ccggcctcatcgcagacttgttcagctcagagtgctactcctgctgctaatgaaagagag
cccctctctgctactgttgatgaaagggctaaaacgctgcctgaacctcttcctcctcct
caccacacctcatcctctgctgttagctcctcaccttcagctactacttccaagacgcac
gctgttggacccagagacctgtcaggattcccctcagagccagtctgctgtcaaagtgct
aatgggatctctacagctgctcagaacattagcaaaaccgaggaagaagttaaggattcg
tcgcagaccaacggtccatcagcacggccggacggtggtacagagaacaaggggcagagc
cagtccaagcccggttctaaaggccatgaaaggcagtcatcccatgacagggacagagac
agattctactctgactatagcaaagacagagacagacactacagggacagaagtccacca
cgagaaagttacagcgatcgccatcggtataggcgagactaccgggatcaccatcgctcc
tacagggatcgatttcctcctgagcggagctactgggacttaaaccgccgcaaggaacga
ctcgggtcgcactcctgggagcatgatcgcgaccggcgctcataccattccagccattac
taccacaagtatgatgggagacatgagaggaggggatacccacaacctcaagagtctcac
agctattggcggtcgcaaaaggacggtcgggaatcctgggcaatgaaggacaaaaggaat
gggtgggatagggaagaaaggagttcctccccagctgctactgctctagaaacaaacaag
tccaaggtttccccccccctggaccgcctctgtaattttaactctactcttaagagggag
gagtcgagtgacaagaggccagctgctcatctaagaaaggagagagaggacagctcagag
ggccgccactccaaaaaacacaaaaaaagcaagaagaagaagaagtcaaaagataaagac
aggcaccacgagagcagctctgacccggattcagacagagccaccgagagcaggaagaag
aaaaagaagaagaggcggcacagggacagcgactccgattccggacggggccacggcaac
agaggcagcaaagaaagagagaaccggaagcgccatcactctgacaccaaggactcgagg
tacgaccaagactttttaccagagaaacgtcagcgcacagactgcagcgatggcagcagg
gaccagccactcccacctcagcaccacgccctctcaaaccattcagctcaccaacatctc
aacggacacacaggagacggtcgaaccaatggtgacttccacagatactccagtggcctc
aagcagtga
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integrated database retrieval system
