Gambusia affinis (western mosquitofish): 122823698
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Entry
122823698 CDS
T07758
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04136
Autophagy - other
gaf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122823698
04136 Autophagy - other
122823698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122823698
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122823698
Membrane trafficking [BR:
gaf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122823698
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122823698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
CPSF_A
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_NWD2_C
EIF3I
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
122823698
NCBI-ProteinID:
XP_043959537
LinkDB
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Position
LG20:2366283..2375457
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AA seq
540 aa
AA seq
DB search
MREGRGLTCWNEPIVTRLIVTHPPISCFCFSQRTLEVNSRIITGFLTGYGETSHSGECER
GAWSLDAEEEQRAPAGIGPSQRPSTSDSETTEVPVARMETQEAISEGPGPHRHFICASFN
QDTTSLSVGTKTGYRLFSVTAVDKLDCIHEGVECPDVYIVERLFSSSLVVVVSLSMPRRM
NVYHFKKGTEICNYSYSNNILSVKLNRQRLVVCLEESIYIHNIRDMKLLKTLLNTPVNPT
GLCALSVNHGTSYLAYPGSATIGEITVYDANNLSTVTLIQAHDSPLAALAFNASGTKLAS
ASEKGTVIRVFSIPEGQKLFEFRRGMKRYVSISSLSFSADAQFLCASSNTETVHIFKLEQ
HSPSQDEESPTWSTYVGKMFTAASTYLPAHVSDMMHQDRAFATVRLNMFGLKNICALATI
QKLPRLLVASSEGYLYVYNVDPQEGGECALVHKHRLFESEEQEEEKEEENQEDGPQQPAG
QSYAATVALPSTPPSSTTLLGYSEDGGAQRGEVFPEHEFAEGPICLDDENEFPPVGNQSN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaggaagggggttgacctgttggaatgagccaatcgttacgcggctgattgtg
acgcatcctcccatcagctgtttttgtttttctcagagaacactggaagttaatagcagg
ataataacaggattcctgactggctacggcgaaacatctcattctggagagtgcgagcgt
ggcgcttggagtctggacgccgaggaggagcagcgggctccggcggggatcggcccgagc
caaaggccttcaacctcggacagcgagacgacagaggttccggtggctcggatggagacc
caagaggcgatatcggagggccccggaccgcaccgccacttcatctgcgcctcgttcaac
caggacaccacctctctgtccgtgggcacgaagacgggataccggctcttctccgtcaca
gctgtggacaaactggactgtatccatgaaggagtggagtgcccagacgtctacatcgtg
gagcgactgttctccagcagcctggtggtggtagtcagtctctccatgccccgtcgaatg
aacgtctaccacttcaagaaggggacggaaatctgcaactacagctactccaacaacatc
ctatcggtgaagctgaacagacagcgactcgtggtgtgcctggaggagtccatctacatc
cacaacatcagagacatgaaactcctcaagaccctgctcaacacgccggtcaacccaaca
ggtctgtgtgcgctgtccgttaaccatggcacctcctacctggcttacccaggcagcgcc
accattggagagatcacggtctacgacgccaacaacctgagcacggtgaccctgatccag
gcccacgacagcccgctggcggccctggcgttcaacgcctccggcacaaagctggccagc
gcatctgagaagggcactgttatcagagttttcagcatcccagagggtcagaagttgttt
gaatttcgtcgggggatgaaaagatacgttagcatcagctctttgtcgttcagcgcagac
gctcagttcctgtgcgcttccagcaacactgagactgttcacatcttcaaactggaacaa
cacagccccagtcaagatgaggaatctccaacatggtcgacatacgtggggaaaatgttc
acagcagccagcacctacctacccgcccatgtgtctgacatgatgcaccaggaccgcgcc
ttcgccaccgtacggctcaacatgttcggcctgaagaacatctgtgccctggccacgatt
cagaagcttccacggctgctggttgcgtcctctgagggttacctctatgtctacaatgta
gatccgcaggagggaggcgagtgtgcccttgttcataaacacagactctttgaatcagag
gagcaggaggaggagaaagaagaggagaaccaagaggacggcccccagcaacccgccggc
caatcatatgctgccactgtggctcttccttccacgcctccttcctccaccacgctcctg
ggctactctgaagacggcggagcccagagaggggaggtcttccctgagcatgaatttgca
gagggcccaatctgtctggatgacgagaacgaatttcctccagttggaaaccagagtaat
taa
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