Gambusia affinis (western mosquitofish): 122823707
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Entry
122823707 CDS
T07758
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100 isoform X1
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122823707 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122823707 (faap100)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
122823707 (faap100)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FANCAA
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
122823707
NCBI-ProteinID:
XP_043959556
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Position
LG20:complement(2632483..2640273)
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AA seq
823 aa
AA seq
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MMEGRCAAEPWAEFGLLGKSGTPLVKCGTGTDVFICTGGEEVFVFTAQEKTLRAVLQMPA
AVRDLAVSPDEQLLFVACWSGVYSVKVQLLVPSSSHDAGSGPTEVKISTECLVAVADRVS
SLLVVGSVLLTLCRTDSSWSLTLYQTQRASQSDPCDLLASFSLPLVSPSVQGDTESRCVL
VCVYPGDVLPASSTPRPSSSHFPLQPLLFRLLFGAEAALSKSPVVLCGLPDGRLSFLPLR
IPGSRLRILHSLEQPVVFVGASAVMETDAGSAGCLIALGKQGRAVLIRAGRAGSEGGGGA
RFTLGCVPGPVECACMDQGRVYYSTGSDLLSVDLWDGSSGTAGRQEDEGSRSNPAALLTP
VSLNVSRVAALHQPTCSSAGEGQLLSLSVRGRLQSIRLPVRTQEDGLSKRPSSQVGRSVG
DILSAIGDVCERASVLKTIIRSKNQVLKQLNQVMNISFLLTNRSESDSKPVRCRGLVRWS
RLLQRDSLNLTCVLENLSPFVLERGWTLSVAVLPLSCPLEAGGEASSVNYSFPFGGLGPG
ESVEVSLPVAAEGDASFPVTVTCSLLFSLWKFLGQEEATAPLDSQRACFSLPLNTLTVDW
LHALRLGDPPAPARSSSNPADLLQGFISSRQLRCRGGGQTSRPEEYSARVRVSSELLRDA
LGLTPGSPRVSLLEWLLSEGCGGVKTERKGIKTDGSSSVICGRAPNNAAVKLTAVEQVNM
EEKTEPLVTMEVQVKSSSVAAVCGLHHAVLRRIQTLLQKAASSRTVPIADLRLALQQAES
EVRSGRPAVWACPLGRRRRSSCVFTSSSEAALCSCSDTHSADL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggacggtgtgctgctgagccttgggctgagttcggccttttagggaaatct
ggaacaccgctggtcaagtgtggaactgggacggatgttttcatctgtactggtggtgag
gaggtttttgtcttcactgcgcaggagaaaacgctcagggcggttcttcagatgcctgct
gctgtgagggatctggctgtcagccctgatgagcagctcctgtttgtggcatgctggagt
ggagtttacagtgtcaaagtccagctgctggtacccagttcctcccatgatgcaggttct
ggtcccactgaggtgaagatctctaccgagtgtctcgttgccgtcgccgacagagtgtcg
tccctcctggtcgttggttccgtgctcctgaccctttgccggaccgactcgtcctggtca
ctgactctgtatcaaacccagcgggcgtcccagtccgacccctgcgacctgctcgcctcc
ttctctctgccgctggtctcgccttccgttcaaggcgacacagaatccagatgtgtgttg
gtgtgtgtgtatcccggcgacgtgttgcctgcctcctctactcctcgtccgtctagttcc
cacttccccctccagcccctcctcttcaggcttctgtttggggcggaagcggcgctctcc
aaatcgccagttgtgctctgcggcctgccagacggacgcttgtccttcctccctctgcgc
atcccgggatccaggctccggatcctccacagcctcgagcagccggtcgtgtttgtcgga
gcatctgctgtcatggaaaccgatgcaggttccgcggggtgtttgatagctctgggcaaa
caaggcagagccgttctgatcagggctggccgggccgggtcagagggaggcggcggcgcc
aggtttactctggggtgcgtcccaggtcccgtagagtgcgcctgtatggatcagggccgt
gtttactacagcaccggctcagacctgctgtcggtggatctatgggacggttcttctggg
acagcaggaagacaggaggacgaggggtcccggtccaaccccgctgccctcctcacaccc
gtcagtttaaacgtgagcagagtcgcggctttgcaccagcctacatgcagctctgcaggt
gaaggtcagctgctcagcctgtcggtcagagggcggctgcagtccatccgtctccctgtt
aggacacaggaggacggcttgtccaagcgtccctcctcccaggttggacgcagcgtcggg
gacatcctgtctgccattggggacgtttgtgaaagagcatcagttttgaaaaccatcatc
agatccaagaatcaggtcctgaagcagctgaatcaggtgatgaacatcagcttcctgctg
acgaaccgttcagagtcggactcgaagccagtcaggtgtcgtggtttggttcggtggagc
agactgcttcagagagactccctgaacctgacatgcgtcctggagaacttgagtcctttc
gtcctggagcggggctggacgctgagcgtcgctgtccttcctctgtcctgtcctctagaa
gcaggaggggaagcctcgtctgtgaactactccttcccgttcggcggtctcggcccgggg
gagtcggtggaggtgtctctgccggtcgcggcggagggcgacgcctccttccccgttacc
gtgacctgctctctcctgttctccctctggaagtttctgggacaggaggaggcgacggcc
cctctggactcacagagggcctgtttcagtttgccgttgaacaccctgacggtggactgg
ctgcacgccctgcggctcggcgacccgccggctccagcccggtccagcagcaacccggca
gacctcctccagggttttataagctcacggcagctccggtgcagaggaggaggccagacg
tccagaccggaggagtattctgctagagtccgcgtgtcgtcagagttactgagggacgcg
ctggggttgacccctgggagcccccgtgtctctttgcttgagtggctgttgtctgaaggc
tgtggtggcgtgaagacggagcgcaaaggaatcaagactgacgggagcagctcagtgatc
tgtggcagggcaccaaataacgccgcagtcaaactgactgctgtagagcaggtaaacatg
gaggagaagacggagcccctggtcaccatggaggttcaggtgaagagctcgtcagttgcg
gccgtgtgcggcctgcaccacgctgtgctgcgtcgcattcagactctgctgcagaaggcc
gcttcctccagaacagttcccattgcagatttgaggctcgcgctacagcaagctgagagc
gaggtcaggtctgggaggccagcggtgtgggcgtgtcctctgggcagacgcagacgctcc
tcctgcgtgtttaccagcagctcagaggcggccctctgctcatgctctgacacccactca
gccgacctttga
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