Gambusia affinis (western mosquitofish): 122823882
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Entry
122823882 CDS
T07758
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122823882 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122823882 (smarcd3b)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122823882 (smarcd3b)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122823882 (smarcd3b)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122823882 (smarcd3b)
PBAF complex
122823882 (smarcd3b)
GBAF(ncBAF) complex
122823882 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Ribosomal_uS5m_N
Motif
Other DBs
NCBI-GeneID:
122823882
NCBI-ProteinID:
XP_043959802
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All DBs
Position
LG21:complement(7067622..7117465)
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AA seq
517 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQTVQNRARKKPVGFPGASEMPARQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLD
LRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIP
QRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIA
SLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERK
AAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaagga
gctcccatgggaccccctggccccccatatggagggagtccggcagtgcggcccggcctg
ccctccccggtgatggagccgagtcgtaaacggcccgccccgtcccagcaggtccagcag
caacagcagcagcagcaacaacaacagcagcagcagaccgtgcagaaccgtgccagaaag
aagccagttggatttcccggagccagcgagatgccagcgaggcagatggacatgagagaa
ccccaatcagatcccacgcttggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggatccgggaactggtacctgaatctcaggcctacatggatctactggct
tttgagcgcaaactggaccaaaccattatgcgtaaacgcgtcgacatccaggaagctctg
aagagaccaatgaagcagcaaaagcgtaaactaaggctctatatttcaaacacgttcaac
ccagctcgacctgacgctgatgactctgatggcagcattgcatcatgggagctgagggta
gagggaaagctgctggatgatccggggaagcagaagaagaagttttcttccttttttaag
agcttggtgatcgagctggacaaagagctgtacggtccggacaaccacctggtcgagtgg
caccgcacacccaccactcaggagacagacggtttccaggtgaagagaccgggagatgtg
agcgtgcgctgcaccctgctgctgatgctggactaccagcctccccagtttaagctggac
ttgcgcctggcgcgcctactgggcatccacactcagactcgctcttgcatcattcaggcc
ctctggcagtacgtgaagaccaacaagctgcaggactcgcatgacaaagagtacattaac
tgtgacaagtacttccaacagatttttgactgtcctcgcttgaagttctctgagattcct
cagcgcctcactaacctcctgctaccgcctgaccccattgtcatcaaccatgtgatcagc
gttgaccccaacgaccagaagaagacggcctgctacgacattgacgtggaggtggaagac
cccctcaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaatcgcc
tccctagacaacaagatccatgagaccatcgaatccatcaaccagctgaagatccaacgg
gacttcatgctcagcttctccagagatcccaaaggctacatccaagactggctcaagtcc
caaagccgagacctcaagctgatgaccgacgtggtggggaaccctgaggaggagcggaag
gcggcattttaccacgaaccctggtcccaggaggcggtcagccgctacttctactgcaag
atccagcagaggagacaggagctggaacaggccttagcagtccgcaacacctaa
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